RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 LORP23490 312 aaPredicted RBP3.18□□□□□ -1.9
TGFBR3-210ENST00000533089 CUBNO60494 3623 aa3.17□□□□□ -1.9
TGFBR3-210ENST00000533089 DNAH10Q8IVF4 4471 aa3.17□□□□□ -1.9
TGFBR3-210ENST00000533089 KRTAP3-2Q9BYR7 98 aa3.13□□□□□ -1.91
TGFBR3-210ENST00000533089 DYNC1H1Q14204 4646 aaKnown RBP3.13□□□□□ -1.91
TGFBR3-210ENST00000533089 ANK2Q01484 3957 aa3.13□□□□□ -1.91
TGFBR3-210ENST00000533089 BIRC6Q9NR09 4857 aa3.12□□□□□ -1.91
TGFBR3-210ENST00000533089 RYR1P21817 5038 aa3.12□□□□□ -1.91
TGFBR3-210ENST00000533089 RYR2Q92736 4967 aa3.11□□□□□ -1.91
TGFBR3-210ENST00000533089 KRTAP10-5P60370 271 aa3.1□□□□□ -1.91
TGFBR3-210ENST00000533089 KRTAP3-3Q9BYR6 98 aa3.1□□□□□ -1.91
TGFBR3-210ENST00000533089 ZNF469Q96JG9 3925 aaPredicted RBP3.09□□□□□ -1.91
TGFBR3-210ENST00000533089 VPS13DQ5THJ4 4388 aa3.09□□□□□ -1.91
TGFBR3-210ENST00000533089 COL7A1Q02388 2944 aa3.07□□□□□ -1.92
TGFBR3-210ENST00000533089 LCE2BO14633 110 aa3.07□□□□□ -1.92
TGFBR3-210ENST00000533089 VPS13CQ709C8 3753 aa3.07□□□□□ -1.92
TGFBR3-210ENST00000533089 KRTAP10-12P60413 245 aa3.06□□□□□ -1.92
TGFBR3-210ENST00000533089 DNAH1Q9P2D7 4330 aa3.06□□□□□ -1.92
TGFBR3-210ENST00000533089 KIAA1109Q2LD37 5005 aa3.06□□□□□ -1.92
TGFBR3-210ENST00000533089 STARD9Q9P2P6 4700 aa3.05□□□□□ -1.92
TGFBR3-210ENST00000533089 DNAH17Q9UFH2 4485 aa3.05□□□□□ -1.92
TGFBR3-210ENST00000533089 DYNC2H1Q8NCM8 4307 aaKnown RBP3.03□□□□□ -1.92
TGFBR3-210ENST00000533089 RYR3Q15413 4870 aa3.02□□□□□ -1.93
TGFBR3-210ENST00000533089 LCE2AQ5TA79 106 aaPredicted RBP3.01□□□□□ -1.93
TGFBR3-210ENST00000533089 LRP1BQ9NZR2 4599 aa3□□□□□ -1.93
TGFBR3-210ENST00000533089 PRKDCP78527 4128 aaKnown RBP2.98□□□□□ -1.93
TGFBR3-210ENST00000533089 DNAH2Q9P225 4427 aa2.96□□□□□ -1.94
TGFBR3-210ENST00000533089 KRTAP10-7P60409 375 aaPredicted RBP2.96□□□□□ -1.94
TGFBR3-210ENST00000533089 DNAH3Q8TD57 4116 aa2.95□□□□□ -1.94
TGFBR3-210ENST00000533089 SACSQ9NZJ4 4579 aa2.95□□□□□ -1.94
TGFBR3-210ENST00000533089 LCE3AQ5TA76 89 aa2.95□□□□□ -1.94
TGFBR3-210ENST00000533089 KRTAP12-3P60328 96 aa2.94□□□□□ -1.94
TGFBR3-210ENST00000533089 LCE2CQ5TA81 110 aa2.93□□□□□ -1.94
TGFBR3-210ENST00000533089 KRTAP8-1Q8IUC2 63 aa2.92□□□□□ -1.94
TGFBR3-210ENST00000533089 FAT1Q14517 4588 aa2.92□□□□□ -1.94
TGFBR3-210ENST00000533089 FAT2Q9NYQ8 4349 aa2.91□□□□□ -1.94
TGFBR3-210ENST00000533089 HERC1Q15751 4861 aa2.91□□□□□ -1.94
TGFBR3-210ENST00000533089 DNAH6Q9C0G6 4158 aa2.91□□□□□ -1.94
TGFBR3-210ENST00000533089 HERC2O95714 4834 aa2.91□□□□□ -1.94
TGFBR3-210ENST00000533089 DNAH8Q96JB1 4490 aa2.9□□□□□ -1.95
TGFBR3-210ENST00000533089 PCLOQ9Y6V0 5065 aa2.89□□□□□ -1.95
TGFBR3-210ENST00000533089 CMYA5Q8N3K9 4069 aa2.88□□□□□ -1.95
TGFBR3-210ENST00000533089 KRTAP17-1Q9BYP8 105 aa2.87□□□□□ -1.95
TGFBR3-210ENST00000533089 KRTAP4-1Q9BYQ7 146 aa2.87□□□□□ -1.95
TGFBR3-210ENST00000533089 MT1HP80294 61 aa2.84□□□□□ -1.95
TGFBR3-210ENST00000533089 APOBP04114 4563 aaKnown RBP2.84□□□□□ -1.96
TGFBR3-210ENST00000533089 HYDINQ4G0P3 5121 aa2.83□□□□□ -1.96
TGFBR3-210ENST00000533089 ABCA13Q86UQ4 5058 aa2.81□□□□□ -1.96
TGFBR3-210ENST00000533089 DNAH7Q8WXX0 4024 aa2.79□□□□□ -1.96
TGFBR3-210ENST00000533089 CSMD3Q7Z407 3707 aa2.78□□□□□ -1.97
TGFBR3-210ENST00000533089 EPPK1P58107 5090 aaKnown RBP2.78□□□□□ -1.97
TGFBR3-210ENST00000533089 SPRR2FQ96RM1 72 aa2.77□□□□□ -1.97
TGFBR3-210ENST00000533089 MT2AP02795 61 aa2.76□□□□□ -1.97
TGFBR3-210ENST00000533089 KMT2AQ03164 3969 aa2.75□□□□□ -1.97
TGFBR3-210ENST00000533089 KMT2CQ8NEZ4 4911 aaKnown RBP2.75□□□□□ -1.97
TGFBR3-210ENST00000533089 FAT3Q8TDW7 4589 aa2.73□□□□□ -1.97
TGFBR3-210ENST00000533089 HSPG2P98160 4391 aa2.73□□□□□ -1.97
TGFBR3-210ENST00000533089 MYCBP2O75592 4640 aa2.71□□□□□ -1.98
TGFBR3-210ENST00000533089 MT1FP04733 61 aa2.7□□□□□ -1.98
TGFBR3-210ENST00000533089 VPS13BQ7Z7G8 4022 aa2.69□□□□□ -1.98
TGFBR3-210ENST00000533089 SPRR2EP22531 72 aa2.69□□□□□ -1.98
TGFBR3-210ENST00000533089 SPRR2BP35325 72 aa2.69□□□□□ -1.98
TGFBR3-210ENST00000533089 SPRR2AP35326 72 aa2.69□□□□□ -1.98
TGFBR3-210ENST00000533089 SPRR2GQ9BYE4 73 aa2.68□□□□□ -1.98
TGFBR3-210ENST00000533089 LYSTQ99698 3801 aa2.67□□□□□ -1.98
TGFBR3-210ENST00000533089 LRP1Q07954 4544 aaKnown RBP2.67□□□□□ -1.98
TGFBR3-210ENST00000533089 RNF213Q63HN8 5207 aa2.64□□□□□ -1.99
TGFBR3-210ENST00000533089 HECTD4Q9Y4D8 3996 aa2.64□□□□□ -1.99
TGFBR3-210ENST00000533089 PKHD1L1Q86WI1 4243 aa2.64□□□□□ -1.99
TGFBR3-210ENST00000533089 LCE3BQ5TA77 95 aa2.64□□□□□ -1.99
TGFBR3-210ENST00000533089 PKD1P98161 4303 aa2.63□□□□□ -1.99
TGFBR3-210ENST00000533089 SPRR5A0A1B0GTR4 108 aa2.63□□□□□ -1.99
TGFBR3-210ENST00000533089 KRTAP19-5Q3LI72 72 aa2.61□□□□□ -1.99
TGFBR3-210ENST00000533089 FRAS1Q86XX4 4008 aa2.61□□□□□ -1.99
TGFBR3-210ENST00000533089 HMCN2Q8NDA2 5059 aa2.6□□□□□ -1.99
TGFBR3-210ENST00000533089 KRTAP12-4P60329 112 aa2.59□□□□□ -1.99
TGFBR3-210ENST00000533089 LCE3CQ5T5A8 94 aa2.59□□□□□ -2
TGFBR3-210ENST00000533089 SPRR2DP22532 72 aa2.58□□□□□ -2
TGFBR3-210ENST00000533089 KRTAP19-8Q3LI54 63 aa2.57□□□□□ -2
TGFBR3-210ENST00000533089 PKHD1P08F94 4074 aa2.57□□□□□ -2
TGFBR3-210ENST00000533089 KRTAP9-8Q9BYQ0 159 aa2.55□□□□□ -2
TGFBR3-210ENST00000533089 KRTAP19-1Q8IUB9 90 aa2.53□□□□□ -2
TGFBR3-210ENST00000533089 LRP2P98164 4655 aa2.53□□□□□ -2
TGFBR3-210ENST00000533089 UBR4Q5T4S7 5183 aa2.53□□□□□ -2
TGFBR3-210ENST00000533089 KRTAP19-2Q3LHN2 52 aa2.52□□□□□ -2.01
TGFBR3-210ENST00000533089 MUC17Q685J3 4493 aa2.51□□□□□ -2.01
TGFBR3-210ENST00000533089 KRTAP9-3Q9BYQ3 159 aa2.5□□□□□ -2.01
TGFBR3-210ENST00000533089 MT1GP13640 62 aa2.48□□□□□ -2.01
TGFBR3-210ENST00000533089 FAT4Q6V0I7 4981 aa2.48□□□□□ -2.01
TGFBR3-210ENST00000533089 TNXBP22105 4242 aa2.48□□□□□ -2.01
TGFBR3-210ENST00000533089 MT1BP07438 61 aa2.47□□□□□ -2.01
TGFBR3-210ENST00000533089 MT4P47944 62 aa2.46□□□□□ -2.02
TGFBR3-210ENST00000533089 KRTAP19-4Q3LI73 84 aa2.45□□□□□ -2.02
TGFBR3-210ENST00000533089 LPAP08519 4548 aa2.45□□□□□ -2.02
TGFBR3-210ENST00000533089 MT1XP80297 61 aa2.42□□□□□ -2.02
TGFBR3-210ENST00000533089 KRTAP9-2Q9BYQ4 174 aa2.42□□□□□ -2.02
TGFBR3-210ENST00000533089 KRTAP19-6Q3LI70 58 aa2.37□□□□□ -2.03
TGFBR3-210ENST00000533089 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
TGFBR3-210ENST00000533089 PRM1P04553 51 aa2.35□□□□□ -2.03
TGFBR3-210ENST00000533089 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms