RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 KRTAP6-1Q3LI64 71 aa-0.08□□□□□ -2.42
AC055878.1-201ENST00000531858 DUOX1Q9NRD9 1551 aa-0.08□□□□□ -2.42
AC055878.1-201ENST00000531858 RIF1Q5UIP0 2472 aaKnown RBP-0.08□□□□□ -2.42
AC055878.1-201ENST00000531858 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.09□□□□□ -2.42
AC055878.1-201ENST00000531858 DEFB1P60022 68 aa-0.09□□□□□ -2.42
AC055878.1-201ENST00000531858 KRTAP19-7Q3SYF9 63 aa-0.1□□□□□ -2.43
AC055878.1-201ENST00000531858 NBEAL1Q6ZS30 2694 aa-0.1□□□□□ -2.43
AC055878.1-201ENST00000531858 DSTQ03001 7570 aaKnown RBP-0.1□□□□□ -2.43
AC055878.1-201ENST00000531858 DNAH6Q9C0G6 4158 aa-0.1□□□□□ -2.43
AC055878.1-201ENST00000531858 HTTP42858 3142 aa-0.11□□□□□ -2.43
AC055878.1-201ENST00000531858 TRIOO75962 3097 aa-0.11□□□□□ -2.43
AC055878.1-201ENST00000531858 RPL39P62891 51 aaKnown RBP-0.11□□□□□ -2.43
AC055878.1-201ENST00000531858 NBEAL2Q6ZNJ1 2754 aa-0.11□□□□□ -2.43
AC055878.1-201ENST00000531858 LAMA5O15230 3695 aa-0.11□□□□□ -2.43
AC055878.1-201ENST00000531858 COL6A5A8TX70 2615 aa-0.12□□□□□ -2.43
AC055878.1-201ENST00000531858 MT1HP80294 61 aa-0.12□□□□□ -2.43
AC055878.1-201ENST00000531858 HIVEP1P15822 2718 aa-0.12□□□□□ -2.43
AC055878.1-201ENST00000531858 NBEAQ8NFP9 2946 aa-0.12□□□□□ -2.43
AC055878.1-201ENST00000531858 MGAM2Q2M2H8 2515 aa-0.13□□□□□ -2.43
AC055878.1-201ENST00000531858 AKAP9Q99996 3911 aa-0.13□□□□□ -2.43
AC055878.1-201ENST00000531858 MUC2Q02817 5179 aa-0.13□□□□□ -2.43
AC055878.1-201ENST00000531858 MYO18BQ8IUG5 2567 aa-0.14□□□□□ -2.43
AC055878.1-201ENST00000531858 FAT1Q14517 4588 aa-0.14□□□□□ -2.43
AC055878.1-201ENST00000531858 DNAH1Q9P2D7 4330 aa-0.14□□□□□ -2.43
AC055878.1-201ENST00000531858 NBPF19A0A087WUL8 3843 aa-0.15□□□□□ -2.43
AC055878.1-201ENST00000531858 MXRA5Q9NR99 2828 aa-0.16□□□□□ -2.43
AC055878.1-201ENST00000531858 TOMM7Q9P0U1 55 aa-0.16□□□□□ -2.44
AC055878.1-201ENST00000531858 PCLOQ9Y6V0 5065 aa-0.17□□□□□ -2.44
AC055878.1-201ENST00000531858 DNAH8Q96JB1 4490 aa-0.18□□□□□ -2.44
AC055878.1-201ENST00000531858 MUC12Q9UKN1 5478 aa-0.18□□□□□ -2.44
AC055878.1-201ENST00000531858 HERC1Q15751 4861 aa-0.19□□□□□ -2.44
AC055878.1-201ENST00000531858 KRTAP19-8Q3LI54 63 aa-0.19□□□□□ -2.44
AC055878.1-201ENST00000531858 LAMA1P25391 3075 aa-0.2□□□□□ -2.44
AC055878.1-201ENST00000531858 RPL39LQ96EH5 51 aaKnown RBP-0.2□□□□□ -2.44
AC055878.1-201ENST00000531858 SPENQ96T58 3664 aaKnown RBP-0.2□□□□□ -2.44
AC055878.1-201ENST00000531858 COL12A1Q99715 3063 aa-0.2□□□□□ -2.44
AC055878.1-201ENST00000531858 KALRNO60229 2985 aa-0.21□□□□□ -2.44
AC055878.1-201ENST00000531858 ITPR3Q14573 2671 aa-0.21□□□□□ -2.44
AC055878.1-201ENST00000531858 LINC01590Q5TEZ4 76 aa-0.21□□□□□ -2.44
AC055878.1-201ENST00000531858 TLN2Q9Y4G6 2542 aa-0.21□□□□□ -2.44
AC055878.1-201ENST00000531858 LEAP2Q969E1 77 aa-0.22□□□□□ -2.44
AC055878.1-201ENST00000531858 CELSR3Q9NYQ7 3312 aa-0.22□□□□□ -2.45
AC055878.1-201ENST00000531858 MUC17Q685J3 4493 aa-0.23□□□□□ -2.45
AC055878.1-201ENST00000531858 KMT2CQ8NEZ4 4911 aaKnown RBP-0.23□□□□□ -2.45
AC055878.1-201ENST00000531858 GCC2Q8IWJ2 1684 aa-0.24□□□□□ -2.45
AC055878.1-201ENST00000531858 WDR87Q6ZQQ6 2873 aa-0.24□□□□□ -2.45
AC055878.1-201ENST00000531858 MT1EP04732 61 aa-0.25□□□□□ -2.45
AC055878.1-201ENST00000531858 DNAH7Q8WXX0 4024 aa-0.25□□□□□ -2.45
AC055878.1-201ENST00000531858 STARD9Q9P2P6 4700 aa-0.25□□□□□ -2.45
AC055878.1-201ENST00000531858 USP9XQ93008 2570 aaPredicted RBP-0.27□□□□□ -2.45
AC055878.1-201ENST00000531858 CCDC168Q8NDH2 2452 aa-0.27□□□□□ -2.45
AC055878.1-201ENST00000531858 USP9YO00507 2555 aaPredicted RBP-0.28□□□□□ -2.45
AC055878.1-201ENST00000531858 ITPR1Q14643 2758 aa-0.28□□□□□ -2.45
AC055878.1-201ENST00000531858 SPTBN5Q9NRC6 3674 aaKnown RBP-0.29□□□□□ -2.46
AC055878.1-201ENST00000531858 CMYA5Q8N3K9 4069 aa-0.29□□□□□ -2.46
AC055878.1-201ENST00000531858 TEX15Q9BXT5 2789 aa-0.3□□□□□ -2.46
AC055878.1-201ENST00000531858 UBR4Q5T4S7 5183 aa-0.3□□□□□ -2.46
AC055878.1-201ENST00000531858 DNAH10Q8IVF4 4471 aa-0.3□□□□□ -2.46
AC055878.1-201ENST00000531858 PLECQ15149 4684 aaKnown RBP-0.3□□□□□ -2.46
AC055878.1-201ENST00000531858 FRYQ5TBA9 3013 aa-0.3□□□□□ -2.46
AC055878.1-201ENST00000531858 DEFB136Q30KP8 78 aa-0.32□□□□□ -2.46
AC055878.1-201ENST00000531858 MT1LQ93083 61 aa-0.32□□□□□ -2.46
AC055878.1-201ENST00000531858 MT4P47944 62 aa-0.33□□□□□ -2.46
AC055878.1-201ENST00000531858 HERC2O95714 4834 aa-0.33□□□□□ -2.46
AC055878.1-201ENST00000531858 C5orf42Q9H799 3197 aa-0.34□□□□□ -2.46
AC055878.1-201ENST00000531858 CHD7Q9P2D1 2997 aa-0.34□□□□□ -2.46
AC055878.1-201ENST00000531858 RELNP78509 3460 aa-0.34□□□□□ -2.46
AC055878.1-201ENST00000531858 MT1XP80297 61 aa-0.35□□□□□ -2.47
AC055878.1-201ENST00000531858 USH2AO75445 5202 aa-0.35□□□□□ -2.47
AC055878.1-201ENST00000531858 TRRAPQ9Y4A5 3859 aa-0.35□□□□□ -2.47
AC055878.1-201ENST00000531858 DNHD1Q96M86 4753 aa-0.36□□□□□ -2.47
AC055878.1-201ENST00000531858 KRTAP20-2Q3LI61 65 aa-0.36□□□□□ -2.47
AC055878.1-201ENST00000531858 SPTAN1Q13813 2472 aaKnown RBP-0.36□□□□□ -2.47
AC055878.1-201ENST00000531858 RYR1P21817 5038 aa-0.37□□□□□ -2.47
AC055878.1-201ENST00000531858 DYNC1H1Q14204 4646 aaKnown RBP-0.37□□□□□ -2.47
AC055878.1-201ENST00000531858 LRBAP50851 2863 aa-0.38□□□□□ -2.47
AC055878.1-201ENST00000531858 EPPK1P58107 5090 aaKnown RBP-0.38□□□□□ -2.47
AC055878.1-201ENST00000531858 MYO9AB2RTY4 2548 aa-0.39□□□□□ -2.47
AC055878.1-201ENST00000531858 DNAH17Q9UFH2 4485 aa-0.39□□□□□ -2.47
AC055878.1-201ENST00000531858 LAMA3Q16787 3333 aa-0.4□□□□□ -2.47
AC055878.1-201ENST00000531858 CFAP46Q8IYW2 2715 aa-0.42□□□□□ -2.48
AC055878.1-201ENST00000531858 RHPN1-AS1Q9BWJ2 59 aa-0.42□□□□□ -2.48
AC055878.1-201ENST00000531858 MGAQ8IWI9 3026 aa-0.42□□□□□ -2.48
AC055878.1-201ENST00000531858 DOPEY1Q5JWR5 2465 aa-0.42□□□□□ -2.48
AC055878.1-201ENST00000531858 BIRC6Q9NR09 4857 aa-0.42□□□□□ -2.48
AC055878.1-201ENST00000531858 ZFHX4Q86UP3 3567 aa-0.43□□□□□ -2.48
AC055878.1-201ENST00000531858 CSMD1Q96PZ7 3565 aa-0.43□□□□□ -2.48
AC055878.1-201ENST00000531858 CRYBG3Q68DQ2 2970 aa-0.43□□□□□ -2.48
AC055878.1-201ENST00000531858 ARHGAP5-AS1Q96IT6 56 aa-0.43□□□□□ -2.48
AC055878.1-201ENST00000531858 ADGRG4Q8IZF6 3080 aa-0.44□□□□□ -2.48
AC055878.1-201ENST00000531858 CEP295Q9C0D2 2601 aa-0.44□□□□□ -2.48
AC055878.1-201ENST00000531858 NIPBLQ6KC79 2804 aaeCLIP-0.44□□□□□ -2.48
AC055878.1-201ENST00000531858 NEBP20929 6669 aa-0.45□□□□□ -2.48
AC055878.1-201ENST00000531858 DNAH5Q8TE73 4624 aa-0.45□□□□□ -2.48
AC055878.1-201ENST00000531858 LAMA2P24043 3122 aaKnown RBP-0.46□□□□□ -2.48
AC055878.1-201ENST00000531858 ITPR2Q14571 2701 aa-0.48□□□□□ -2.49
AC055878.1-201ENST00000531858 SRCAPQ6ZRS2 3230 aa-0.49□□□□□ -2.49
AC055878.1-201ENST00000531858 HYDINQ4G0P3 5121 aa-0.51□□□□□ -2.49
AC055878.1-201ENST00000531858 K7EIM0 57 aa-0.51□□□□□ -2.49
AC055878.1-201ENST00000531858 MT1HL1P0DM35 61 aa-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms