RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 DEFB1P60022 68 aa1.09□□□□□ -2.23
PTPRK-220ENST00000531466 CELSR2Q9HCU4 2923 aa1.09□□□□□ -2.23
PTPRK-220ENST00000531466 LAMA5O15230 3695 aa1.09□□□□□ -2.24
PTPRK-220ENST00000531466 RYR1P21817 5038 aa1.09□□□□□ -2.24
PTPRK-220ENST00000531466 TGP01266 2768 aa1.08□□□□□ -2.24
PTPRK-220ENST00000531466 LRBAP50851 2863 aa1.08□□□□□ -2.24
PTPRK-220ENST00000531466 ACACAQ13085 2346 aa1.08□□□□□ -2.24
PTPRK-220ENST00000531466 DMXL2Q8TDJ6 3036 aa1.08□□□□□ -2.24
PTPRK-220ENST00000531466 CENPEQ02224 2701 aa1.07□□□□□ -2.24
PTPRK-220ENST00000531466 TNP1P09430 55 aa1.07□□□□□ -2.24
PTPRK-220ENST00000531466 DEFB135Q30KP9 77 aa1.07□□□□□ -2.24
PTPRK-220ENST00000531466 Q9Y3F1 56 aa1.07□□□□□ -2.24
PTPRK-220ENST00000531466 MEGF8Q7Z7M0 2845 aa1.07□□□□□ -2.24
PTPRK-220ENST00000531466 NSD1Q96L73 2696 aaPredicted RBP1.07□□□□□ -2.24
PTPRK-220ENST00000531466 SONP18583 2426 aaKnown RBP1.07□□□□□ -2.24
PTPRK-220ENST00000531466 HIVEP1P15822 2718 aa1.07□□□□□ -2.24
PTPRK-220ENST00000531466 BIRC6Q9NR09 4857 aa1.06□□□□□ -2.24
PTPRK-220ENST00000531466 DEFB124Q8NES8 71 aa1.06□□□□□ -2.24
PTPRK-220ENST00000531466 DEFB108BQ8NET1 73 aa1.06□□□□□ -2.24
PTPRK-220ENST00000531466 TENM3Q9P273 2699 aa1.06□□□□□ -2.24
PTPRK-220ENST00000531466 AHNAK2Q8IVF2 5795 aa1.06□□□□□ -2.24
PTPRK-220ENST00000531466 SPENQ96T58 3664 aaKnown RBP1.05□□□□□ -2.24
PTPRK-220ENST00000531466 DEFB110Q30KQ9 67 aa1.05□□□□□ -2.24
PTPRK-220ENST00000531466 APC2O95996 2303 aa1.05□□□□□ -2.24
PTPRK-220ENST00000531466 MXRA5Q9NR99 2828 aa1.05□□□□□ -2.24
PTPRK-220ENST00000531466 PRRC2CQ9Y520 2896 aaKnown RBP1.05□□□□□ -2.24
PTPRK-220ENST00000531466 CHD7Q9P2D1 2997 aa1.04□□□□□ -2.24
PTPRK-220ENST00000531466 SPINK6Q6UWN8 80 aa1.04□□□□□ -2.24
PTPRK-220ENST00000531466 KIAA1109Q2LD37 5005 aa1.04□□□□□ -2.24
PTPRK-220ENST00000531466 PCLOQ9Y6V0 5065 aa1.04□□□□□ -2.24
PTPRK-220ENST00000531466 APCP25054 2843 aa1.03□□□□□ -2.24
PTPRK-220ENST00000531466 ZANQ9Y493 2812 aa1.03□□□□□ -2.24
PTPRK-220ENST00000531466 C9orf92A6NGG3 77 aa1.03□□□□□ -2.24
PTPRK-220ENST00000531466 SPART-AS1P0CW21 52 aa1.03□□□□□ -2.24
PTPRK-220ENST00000531466 DEFB136Q30KP8 78 aa1.03□□□□□ -2.24
PTPRK-220ENST00000531466 BSNQ9UPA5 3926 aa1.03□□□□□ -2.24
PTPRK-220ENST00000531466 DCHS2Q6V1P9 2916 aa1.03□□□□□ -2.24
PTPRK-220ENST00000531466 M0R2T5 61 aa1.02□□□□□ -2.25
PTPRK-220ENST00000531466 RYR3Q15413 4870 aa1.02□□□□□ -2.25
PTPRK-220ENST00000531466 MGAQ8IWI9 3026 aa1.02□□□□□ -2.25
PTPRK-220ENST00000531466 MAP1AP78559 2803 aaPredicted RBP1.02□□□□□ -2.25
PTPRK-220ENST00000531466 KMT2CQ8NEZ4 4911 aaKnown RBP1.01□□□□□ -2.25
PTPRK-220ENST00000531466 ACANP16112 2415 aa1.01□□□□□ -2.25
PTPRK-220ENST00000531466 VPS13CQ709C8 3753 aa1.01□□□□□ -2.25
PTPRK-220ENST00000531466 ADGRG4Q8IZF6 3080 aa1.01□□□□□ -2.25
PTPRK-220ENST00000531466 CHD9Q3L8U1 2897 aa1.01□□□□□ -2.25
PTPRK-220ENST00000531466 A0A096LNI7 61 aa1.01□□□□□ -2.25
PTPRK-220ENST00000531466 MUC2Q02817 5179 aa1.01□□□□□ -2.25
PTPRK-220ENST00000531466 TENM2Q9NT68 2774 aa1.01□□□□□ -2.25
PTPRK-220ENST00000531466 DNAH11Q96DT5 4516 aa1□□□□□ -2.25
PTPRK-220ENST00000531466 VPS13DQ5THJ4 4388 aa1□□□□□ -2.25
PTPRK-220ENST00000531466 HYDINQ4G0P3 5121 aa1□□□□□ -2.25
PTPRK-220ENST00000531466 LAMA1P25391 3075 aa1□□□□□ -2.25
PTPRK-220ENST00000531466 H3BNG1 76 aa0.99□□□□□ -2.25
PTPRK-220ENST00000531466 KRTAP10-4P60372 401 aaPredicted RBP0.99□□□□□ -2.25
PTPRK-220ENST00000531466 ATMQ13315 3056 aa0.98□□□□□ -2.25
PTPRK-220ENST00000531466 RYR2Q92736 4967 aa0.98□□□□□ -2.25
PTPRK-220ENST00000531466 LINC01556Q5JQF7 62 aa0.98□□□□□ -2.25
PTPRK-220ENST00000531466 CSMD2Q7Z408 3487 aa0.98□□□□□ -2.25
PTPRK-220ENST00000531466 EPPK1P58107 5090 aaKnown RBP0.98□□□□□ -2.25
PTPRK-220ENST00000531466 DMBT1Q9UGM3 2413 aaPredicted RBP0.97□□□□□ -2.25
PTPRK-220ENST00000531466 SRRM2Q9UQ35 2752 aaKnown RBP0.97□□□□□ -2.25
PTPRK-220ENST00000531466 RPS29P62273 56 aaKnown RBP0.95□□□□□ -2.26
PTPRK-220ENST00000531466 MYCBP2O75592 4640 aa0.95□□□□□ -2.26
PTPRK-220ENST00000531466 CUBNO60494 3623 aa0.95□□□□□ -2.26
PTPRK-220ENST00000531466 STAB2Q8WWQ8 2551 aa0.95□□□□□ -2.26
PTPRK-220ENST00000531466 TACC2O95359 2948 aa0.94□□□□□ -2.26
PTPRK-220ENST00000531466 HERC2O95714 4834 aa0.94□□□□□ -2.26
PTPRK-220ENST00000531466 CSMD3Q7Z407 3707 aa0.93□□□□□ -2.26
PTPRK-220ENST00000531466 SVEP1Q4LDE5 3571 aa0.93□□□□□ -2.26
PTPRK-220ENST00000531466 A0A096LPF7 62 aa0.93□□□□□ -2.26
PTPRK-220ENST00000531466 KRTAP2-3P0C7H8 128 aa0.93□□□□□ -2.26
PTPRK-220ENST00000531466 DEFB133Q30KQ1 61 aa0.93□□□□□ -2.26
PTPRK-220ENST00000531466 KRTAP2-4Q9BYR9 128 aa0.93□□□□□ -2.26
PTPRK-220ENST00000531466 KRTAP2-1Q9BYU5 128 aa0.93□□□□□ -2.26
PTPRK-220ENST00000531466 HERC1Q15751 4861 aa0.92□□□□□ -2.26
PTPRK-220ENST00000531466 DNAH8Q96JB1 4490 aa0.91□□□□□ -2.26
PTPRK-220ENST00000531466 ABCA13Q86UQ4 5058 aa0.91□□□□□ -2.26
PTPRK-220ENST00000531466 COL7A1Q02388 2944 aa0.91□□□□□ -2.26
PTPRK-220ENST00000531466 SACSQ9NZJ4 4579 aa0.9□□□□□ -2.27
PTPRK-220ENST00000531466 SMR3AQ99954 134 aa0.9□□□□□ -2.27
PTPRK-220ENST00000531466 AKAP9Q99996 3911 aa0.9□□□□□ -2.27
PTPRK-220ENST00000531466 DNAH2Q9P225 4427 aa0.9□□□□□ -2.27
PTPRK-220ENST00000531466 PRKDCP78527 4128 aaKnown RBP0.89□□□□□ -2.27
PTPRK-220ENST00000531466 DYNC2H1Q8NCM8 4307 aaKnown RBP0.89□□□□□ -2.27
PTPRK-220ENST00000531466 CD52P31358 61 aa0.88□□□□□ -2.27
PTPRK-220ENST00000531466 KRTAP8-1Q8IUC2 63 aa0.88□□□□□ -2.27
PTPRK-220ENST00000531466 U3KQA8 63 aa0.88□□□□□ -2.27
PTPRK-220ENST00000531466 ANK3Q12955 4377 aaKnown RBP0.87□□□□□ -2.27
PTPRK-220ENST00000531466 ANK2Q01484 3957 aa0.87□□□□□ -2.27
PTPRK-220ENST00000531466 DNAH3Q8TD57 4116 aa0.87□□□□□ -2.27
PTPRK-220ENST00000531466 ZNF469Q96JG9 3925 aaPredicted RBP0.86□□□□□ -2.27
PTPRK-220ENST00000531466 DNAH10Q8IVF4 4471 aa0.85□□□□□ -2.27
PTPRK-220ENST00000531466 FSIP2Q5CZC0 6907 aa0.85□□□□□ -2.27
PTPRK-220ENST00000531466 TNXBP22105 4242 aa0.85□□□□□ -2.27
PTPRK-220ENST00000531466 KMT2AQ03164 3969 aa0.85□□□□□ -2.27
PTPRK-220ENST00000531466 RNF213Q63HN8 5207 aa0.85□□□□□ -2.27
PTPRK-220ENST00000531466 VPS13BQ7Z7G8 4022 aa0.85□□□□□ -2.27
PTPRK-220ENST00000531466 FAT4Q6V0I7 4981 aa0.85□□□□□ -2.27
PTPRK-220ENST00000531466 DNAH7Q8WXX0 4024 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms