RNA–Protein interactions for RNA: ENST00000530724.1

TRIM3-210, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-210ENST00000530724 DYNC1H1Q14204 4646 aaKnown RBP5.94□□□□□ -1.46
TRIM3-210ENST00000530724 S4R3F8 94 aa5.93□□□□□ -1.46
TRIM3-210ENST00000530724 XP32Q5T750 250 aa5.92□□□□□ -1.46
TRIM3-210ENST00000530724 CRIPTQ9P021 101 aa5.92□□□□□ -1.46
TRIM3-210ENST00000530724 SPINT4Q6UDR6 99 aa5.91□□□□□ -1.46
TRIM3-210ENST00000530724 TNXBP22105 4242 aa5.9□□□□□ -1.47
TRIM3-210ENST00000530724 M0QZ58 72 aa5.88□□□□□ -1.47
TRIM3-210ENST00000530724 KRTAP12-1P59990 96 aa5.87□□□□□ -1.47
TRIM3-210ENST00000530724 A0A1B0GVY2 172 aa5.86□□□□□ -1.47
TRIM3-210ENST00000530724 LRP1Q07954 4544 aaKnown RBP5.85□□□□□ -1.47
TRIM3-210ENST00000530724 FLG2Q5D862 2391 aaPredicted RBP5.85□□□□□ -1.47
TRIM3-210ENST00000530724 HSPG2P98160 4391 aa5.84□□□□□ -1.47
TRIM3-210ENST00000530724 FAT3Q8TDW7 4589 aa5.84□□□□□ -1.48
TRIM3-210ENST00000530724 KRTAP12-2P59991 146 aa5.83□□□□□ -1.48
TRIM3-210ENST00000530724 KRTAP10-8P60410 259 aa5.83□□□□□ -1.48
TRIM3-210ENST00000530724 A0A0D9SG42 100 aa5.82□□□□□ -1.48
TRIM3-210ENST00000530724 HYDINQ4G0P3 5121 aa5.82□□□□□ -1.48
TRIM3-210ENST00000530724 FAT1Q14517 4588 aa5.82□□□□□ -1.48
TRIM3-210ENST00000530724 C10orf95Q9H7T3 257 aa5.78□□□□□ -1.48
TRIM3-210ENST00000530724 NDUFAF8A1L188 74 aa5.77□□□□□ -1.49
TRIM3-210ENST00000530724 SMR3BP02814 79 aaPredicted RBP5.74□□□□□ -1.49
TRIM3-210ENST00000530724 RYR3Q15413 4870 aa5.71□□□□□ -1.5
TRIM3-210ENST00000530724 KMT2CQ8NEZ4 4911 aaKnown RBP5.69□□□□□ -1.5
TRIM3-210ENST00000530724 DMBT1Q9UGM3 2413 aaPredicted RBP5.63□□□□□ -1.51
TRIM3-210ENST00000530724 KRTAP17-1Q9BYP8 105 aa5.62□□□□□ -1.51
TRIM3-210ENST00000530724 BIRC6Q9NR09 4857 aa5.59□□□□□ -1.52
TRIM3-210ENST00000530724 PP632Q6XCG6 107 aa5.58□□□□□ -1.52
TRIM3-210ENST00000530724 MYCBP2O75592 4640 aa5.58□□□□□ -1.52
TRIM3-210ENST00000530724 EPPK1P58107 5090 aaKnown RBP5.54□□□□□ -1.52
TRIM3-210ENST00000530724 PLAC4Q8WY50 150 aa5.53□□□□□ -1.52
TRIM3-210ENST00000530724 RYR2Q92736 4967 aa5.51□□□□□ -1.53
TRIM3-210ENST00000530724 MT1HL1P0DM35 61 aa5.49□□□□□ -1.53
TRIM3-210ENST00000530724 KRTAP23-1A1A580 65 aa5.47□□□□□ -1.53
TRIM3-210ENST00000530724 Q5VSD8 79 aa5.47□□□□□ -1.53
TRIM3-210ENST00000530724 R4GN34 69 aa5.46□□□□□ -1.54
TRIM3-210ENST00000530724 RYR1P21817 5038 aa5.4□□□□□ -1.54
TRIM3-210ENST00000530724 LUZP6Q538Z0 58 aa5.36□□□□□ -1.55
TRIM3-210ENST00000530724 SPRR5A0A1B0GTR4 108 aa5.35□□□□□ -1.55
TRIM3-210ENST00000530724 A0A0A0MQY5 61 aa5.34□□□□□ -1.55
TRIM3-210ENST00000530724 SEC61BP60468 96 aaKnown RBP5.3□□□□□ -1.56
TRIM3-210ENST00000530724 PCLOQ9Y6V0 5065 aa5.3□□□□□ -1.56
TRIM3-210ENST00000530724 LORP23490 312 aaPredicted RBP5.26□□□□□ -1.57
TRIM3-210ENST00000530724 HERC2O95714 4834 aa5.25□□□□□ -1.57
TRIM3-210ENST00000530724 KRTAP19-2Q3LHN2 52 aa5.25□□□□□ -1.57
TRIM3-210ENST00000530724 LRP2P98164 4655 aa5.23□□□□□ -1.57
TRIM3-210ENST00000530724 MUC17Q685J3 4493 aa5.19□□□□□ -1.58
TRIM3-210ENST00000530724 LPAP08519 4548 aa5.19□□□□□ -1.58
TRIM3-210ENST00000530724 CAMK2N1Q7Z7J9 78 aa5.18□□□□□ -1.58
TRIM3-210ENST00000530724 HERC1Q15751 4861 aa5.18□□□□□ -1.58
TRIM3-210ENST00000530724 TNP1P09430 55 aa5.16□□□□□ -1.58
TRIM3-210ENST00000530724 KRTAP4-1Q9BYQ7 146 aa5.09□□□□□ -1.59
TRIM3-210ENST00000530724 LCE2BO14633 110 aa5.05□□□□□ -1.6
TRIM3-210ENST00000530724 ABCA13Q86UQ4 5058 aa5.03□□□□□ -1.6
TRIM3-210ENST00000530724 KIAA1109Q2LD37 5005 aa5.03□□□□□ -1.6
TRIM3-210ENST00000530724 FLGP20930 4061 aaPredicted RBP5.03□□□□□ -1.6
TRIM3-210ENST00000530724 UBR4Q5T4S7 5183 aa4.98□□□□□ -1.61
TRIM3-210ENST00000530724 SPRR2GQ9BYE4 73 aa4.96□□□□□ -1.62
TRIM3-210ENST00000530724 PRO2289Q9P1D8 64 aa4.96□□□□□ -1.62
TRIM3-210ENST00000530724 INE1O15225 51 aa4.94□□□□□ -1.62
TRIM3-210ENST00000530724 J3QL48 77 aa4.92□□□□□ -1.62
TRIM3-210ENST00000530724 KRTAP8-1Q8IUC2 63 aa4.85□□□□□ -1.63
TRIM3-210ENST00000530724 KRTAP4-5Q9BYR2 181 aa4.83□□□□□ -1.64
TRIM3-210ENST00000530724 KRTAP19-1Q8IUB9 90 aa4.82□□□□□ -1.64
TRIM3-210ENST00000530724 LCE3AQ5TA76 89 aa4.76□□□□□ -1.65
TRIM3-210ENST00000530724 LCE2AQ5TA79 106 aaPredicted RBP4.76□□□□□ -1.65
TRIM3-210ENST00000530724 LCE2CQ5TA81 110 aa4.74□□□□□ -1.65
TRIM3-210ENST00000530724 KRTAP19-8Q3LI54 63 aa4.73□□□□□ -1.65
TRIM3-210ENST00000530724 KRTAP10-12P60413 245 aa4.6□□□□□ -1.67
TRIM3-210ENST00000530724 KRTAP12-3P60328 96 aa4.58□□□□□ -1.68
TRIM3-210ENST00000530724 MT2AP02795 61 aa4.56□□□□□ -1.68
TRIM3-210ENST00000530724 KRTAP10-5P60370 271 aa4.56□□□□□ -1.68
TRIM3-210ENST00000530724 HMCN2Q8NDA2 5059 aa4.55□□□□□ -1.68
TRIM3-210ENST00000530724 MT1XP80297 61 aa4.55□□□□□ -1.68
TRIM3-210ENST00000530724 MT1FP04733 61 aa4.53□□□□□ -1.68
TRIM3-210ENST00000530724 MT1HP80294 61 aa4.53□□□□□ -1.68
TRIM3-210ENST00000530724 MT1BP07438 61 aa4.52□□□□□ -1.69
TRIM3-210ENST00000530724 KRTAP9-8Q9BYQ0 159 aa4.52□□□□□ -1.69
TRIM3-210ENST00000530724 RNF213Q63HN8 5207 aa4.49□□□□□ -1.69
TRIM3-210ENST00000530724 KRTAP10-10P60014 251 aa4.45□□□□□ -1.7
TRIM3-210ENST00000530724 KRTAP19-4Q3LI73 84 aa4.45□□□□□ -1.7
TRIM3-210ENST00000530724 KRTAP9-6A0A140TA67 174 aa4.43□□□□□ -1.7
TRIM3-210ENST00000530724 KRTAP9-2Q9BYQ4 174 aa4.42□□□□□ -1.7
TRIM3-210ENST00000530724 MUC2Q02817 5179 aa4.41□□□□□ -1.7
TRIM3-210ENST00000530724 M0R2T5 61 aa4.38□□□□□ -1.71
TRIM3-210ENST00000530724 LCE3CQ5T5A8 94 aa4.37□□□□□ -1.71
TRIM3-210ENST00000530724 KRTAP9-3Q9BYQ3 159 aa4.34□□□□□ -1.71
TRIM3-210ENST00000530724 KRTAP10-7P60409 375 aaPredicted RBP4.33□□□□□ -1.72
TRIM3-210ENST00000530724 KRTAP2-3P0C7H8 128 aa4.31□□□□□ -1.72
TRIM3-210ENST00000530724 KRTAP2-4Q9BYR9 128 aa4.31□□□□□ -1.72
TRIM3-210ENST00000530724 KRTAP2-1Q9BYU5 128 aa4.31□□□□□ -1.72
TRIM3-210ENST00000530724 FAT4Q6V0I7 4981 aa4.28□□□□□ -1.72
TRIM3-210ENST00000530724 KRTAP19-5Q3LI72 72 aa4.23□□□□□ -1.73
TRIM3-210ENST00000530724 LOC100996750A0A140TA64 210 aa4.21□□□□□ -1.74
TRIM3-210ENST00000530724 KRTAP4-6Q9BYQ5 205 aa4.21□□□□□ -1.74
TRIM3-210ENST00000530724 FSIP2Q5CZC0 6907 aa4.15□□□□□ -1.74
TRIM3-210ENST00000530724 KRTAP9-6A8MVA2 160 aa4.15□□□□□ -1.75
TRIM3-210ENST00000530724 KRTAP19-7Q3SYF9 63 aa4.06□□□□□ -1.76
TRIM3-210ENST00000530724 CRCT1Q9UGL9 99 aa4.06□□□□□ -1.76
TRIM3-210ENST00000530724 MT1LQ93083 61 aa3.97□□□□□ -1.77
TRIM3-210ENST00000530724 MT1EP04732 61 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms