RNA–Protein interactions for RNA: ENST00000530646.1

RPL38-205, Transcript of ribosomal protein L38, humanhuman

TSL 1 (best)

Gene RPL38, Length 2,450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38-205ENST00000530646 KRTAP15-1Q3LI76 137 aa9.61□□□□□ -0.87
RPL38-205ENST00000530646 C20orf166-AS1Q96NR2 134 aa9.59□□□□□ -0.87
RPL38-205ENST00000530646 C9orf92A6NGG3 77 aa9.58□□□□□ -0.88
RPL38-205ENST00000530646 C10orf95Q9H7T3 257 aa9.54□□□□□ -0.88
RPL38-205ENST00000530646 RPL37P61927 97 aaKnown RBP9.54□□□□□ -0.88
RPL38-205ENST00000530646 RPS29P62273 56 aaKnown RBP9.5□□□□□ -0.89
RPL38-205ENST00000530646 KRTAP13-4Q3LI77 160 aa9.49□□□□□ -0.89
RPL38-205ENST00000530646 KRTAP10-6P60371 365 aaPredicted RBP9.47□□□□□ -0.89
RPL38-205ENST00000530646 A0A0D9SG42 100 aa9.45□□□□□ -0.9
RPL38-205ENST00000530646 HSPG2P98160 4391 aa9.43□□□□□ -0.9
RPL38-205ENST00000530646 KRTAP10-4P60372 401 aaPredicted RBP9.41□□□□□ -0.9
RPL38-205ENST00000530646 LRP1Q07954 4544 aaKnown RBP9.39□□□□□ -0.91
RPL38-205ENST00000530646 EPPK1P58107 5090 aaKnown RBP9.39□□□□□ -0.91
RPL38-205ENST00000530646 KIAA1109Q2LD37 5005 aa9.38□□□□□ -0.91
RPL38-205ENST00000530646 KRTAP3-3Q9BYR6 98 aa9.36□□□□□ -0.91
RPL38-205ENST00000530646 KRTAP3-2Q9BYR7 98 aa9.36□□□□□ -0.91
RPL38-205ENST00000530646 PKHD1L1Q86WI1 4243 aa9.35□□□□□ -0.91
RPL38-205ENST00000530646 A0A0A0MQY5 61 aa9.34□□□□□ -0.91
RPL38-205ENST00000530646 KRTAP17-1Q9BYP8 105 aa9.33□□□□□ -0.92
RPL38-205ENST00000530646 DMBT1Q9UGM3 2413 aaPredicted RBP9.32□□□□□ -0.92
RPL38-205ENST00000530646 RYR1P21817 5038 aa9.32□□□□□ -0.92
RPL38-205ENST00000530646 S4R3F8 94 aa9.25□□□□□ -0.93
RPL38-205ENST00000530646 MYCBP2O75592 4640 aa9.25□□□□□ -0.93
RPL38-205ENST00000530646 KRTAP12-2P59991 146 aa9.22□□□□□ -0.93
RPL38-205ENST00000530646 Q5VSD8 79 aa9.21□□□□□ -0.94
RPL38-205ENST00000530646 TNXBP22105 4242 aa9.19□□□□□ -0.94
RPL38-205ENST00000530646 FAT3Q8TDW7 4589 aa9.11□□□□□ -0.95
RPL38-205ENST00000530646 KRTAP12-1P59990 96 aa9.09□□□□□ -0.95
RPL38-205ENST00000530646 XP32Q5T750 250 aa9.08□□□□□ -0.96
RPL38-205ENST00000530646 KRTAP10-8P60410 259 aa9.07□□□□□ -0.96
RPL38-205ENST00000530646 KRTAP4-5Q9BYR2 181 aa8.97□□□□□ -0.97
RPL38-205ENST00000530646 LUZP6Q538Z0 58 aa8.95□□□□□ -0.98
RPL38-205ENST00000530646 ABCA13Q86UQ4 5058 aa8.89□□□□□ -0.99
RPL38-205ENST00000530646 MT1HL1P0DM35 61 aa8.89□□□□□ -0.99
RPL38-205ENST00000530646 M0QZ58 72 aa8.81□□□□□ -1
RPL38-205ENST00000530646 LPAP08519 4548 aa8.77□□□□□ -1
RPL38-205ENST00000530646 HERC2O95714 4834 aa8.77□□□□□ -1.01
RPL38-205ENST00000530646 PLAC4Q8WY50 150 aa8.75□□□□□ -1.01
RPL38-205ENST00000530646 LRP2P98164 4655 aa8.72□□□□□ -1.01
RPL38-205ENST00000530646 BIRC6Q9NR09 4857 aa8.71□□□□□ -1.02
RPL38-205ENST00000530646 PCLOQ9Y6V0 5065 aa8.55□□□□□ -1.04
RPL38-205ENST00000530646 J3QL48 77 aa8.49□□□□□ -1.05
RPL38-205ENST00000530646 R4GN34 69 aa8.49□□□□□ -1.05
RPL38-205ENST00000530646 HERC1Q15751 4861 aa8.48□□□□□ -1.05
RPL38-205ENST00000530646 LORP23490 312 aaPredicted RBP8.38□□□□□ -1.07
RPL38-205ENST00000530646 MUC2Q02817 5179 aa8.35□□□□□ -1.07
RPL38-205ENST00000530646 PP632Q6XCG6 107 aa8.31□□□□□ -1.08
RPL38-205ENST00000530646 MUC17Q685J3 4493 aa8.23□□□□□ -1.09
RPL38-205ENST00000530646 KRTAP4-1Q9BYQ7 146 aa8.22□□□□□ -1.09
RPL38-205ENST00000530646 HMCN2Q8NDA2 5059 aa8.21□□□□□ -1.1
RPL38-205ENST00000530646 SEC61BP60468 96 aaKnown RBP8.14□□□□□ -1.11
RPL38-205ENST00000530646 CAMK2N1Q7Z7J9 78 aa8.13□□□□□ -1.11
RPL38-205ENST00000530646 SPRR5A0A1B0GTR4 108 aa8.08□□□□□ -1.12
RPL38-205ENST00000530646 LCE2DQ5TA82 110 aaPredicted RBP8.02□□□□□ -1.13
RPL38-205ENST00000530646 UBR4Q5T4S7 5183 aa8.01□□□□□ -1.13
RPL38-205ENST00000530646 RNF213Q63HN8 5207 aa8.01□□□□□ -1.13
RPL38-205ENST00000530646 FAT4Q6V0I7 4981 aa7.96□□□□□ -1.14
RPL38-205ENST00000530646 KRTAP19-2Q3LHN2 52 aa7.92□□□□□ -1.14
RPL38-205ENST00000530646 TNP1P09430 55 aa7.89□□□□□ -1.15
RPL38-205ENST00000530646 KRTAP23-1A1A580 65 aa7.89□□□□□ -1.15
RPL38-205ENST00000530646 PRO2289Q9P1D8 64 aa7.87□□□□□ -1.15
RPL38-205ENST00000530646 FLGP20930 4061 aaPredicted RBP7.8□□□□□ -1.16
RPL38-205ENST00000530646 LCE2CQ5TA81 110 aa7.67□□□□□ -1.18
RPL38-205ENST00000530646 INE1O15225 51 aa7.58□□□□□ -1.2
RPL38-205ENST00000530646 MT1HP80294 61 aa7.47□□□□□ -1.21
RPL38-205ENST00000530646 LCE3AQ5TA76 89 aa7.47□□□□□ -1.21
RPL38-205ENST00000530646 M0R2T5 61 aa7.46□□□□□ -1.21
RPL38-205ENST00000530646 SPRR2GQ9BYE4 73 aa7.32□□□□□ -1.24
RPL38-205ENST00000530646 KRTAP19-1Q8IUB9 90 aa7.29□□□□□ -1.24
RPL38-205ENST00000530646 MT1FP04733 61 aa7.25□□□□□ -1.25
RPL38-205ENST00000530646 KRTAP8-1Q8IUC2 63 aa7.25□□□□□ -1.25
RPL38-205ENST00000530646 KRTAP9-8Q9BYQ0 159 aa7.24□□□□□ -1.25
RPL38-205ENST00000530646 MT2AP02795 61 aa7.23□□□□□ -1.25
RPL38-205ENST00000530646 KRTAP10-10P60014 251 aa7.2□□□□□ -1.26
RPL38-205ENST00000530646 KRTAP10-12P60413 245 aa7.07□□□□□ -1.28
RPL38-205ENST00000530646 KRTAP12-3P60328 96 aa7.05□□□□□ -1.28
RPL38-205ENST00000530646 LCE2AQ5TA79 106 aaPredicted RBP6.98□□□□□ -1.29
RPL38-205ENST00000530646 USH2AO75445 5202 aa6.97□□□□□ -1.29
RPL38-205ENST00000530646 KRTAP10-5P60370 271 aa6.95□□□□□ -1.3
RPL38-205ENST00000530646 KRTAP9-3Q9BYQ3 159 aa6.94□□□□□ -1.3
RPL38-205ENST00000530646 MT1XP80297 61 aa6.92□□□□□ -1.3
RPL38-205ENST00000530646 KRTAP19-8Q3LI54 63 aa6.89□□□□□ -1.31
RPL38-205ENST00000530646 MT1BP07438 61 aa6.87□□□□□ -1.31
RPL38-205ENST00000530646 LCE2BO14633 110 aa6.81□□□□□ -1.32
RPL38-205ENST00000530646 KRTAP10-7P60409 375 aaPredicted RBP6.8□□□□□ -1.32
RPL38-205ENST00000530646 FSIP2Q5CZC0 6907 aa6.69□□□□□ -1.34
RPL38-205ENST00000530646 LCE3CQ5T5A8 94 aa6.69□□□□□ -1.34
RPL38-205ENST00000530646 KRTAP19-5Q3LI72 72 aa6.6□□□□□ -1.35
RPL38-205ENST00000530646 KMT2DO14686 5537 aa6.57□□□□□ -1.36
RPL38-205ENST00000530646 KRTAP9-6A8MVA2 160 aa6.57□□□□□ -1.36
RPL38-205ENST00000530646 SSPOA2VEC9 5147 aa6.51□□□□□ -1.37
RPL38-205ENST00000530646 KRTAP2-3P0C7H8 128 aa6.5□□□□□ -1.37
RPL38-205ENST00000530646 KRTAP2-4Q9BYR9 128 aa6.5□□□□□ -1.37
RPL38-205ENST00000530646 KRTAP2-1Q9BYU5 128 aa6.5□□□□□ -1.37
RPL38-205ENST00000530646 KRTAP4-8A0A0G2JLE6 195 aa6.31□□□□□ -1.4
RPL38-205ENST00000530646 KRTAP4-8Q9BYQ9 185 aa6.31□□□□□ -1.4
RPL38-205ENST00000530646 KRTAP4-7Q9BYR0 210 aa6.28□□□□□ -1.4
RPL38-205ENST00000530646 KRTAP19-7Q3SYF9 63 aa6.16□□□□□ -1.42
RPL38-205ENST00000530646 FCGBPQ9Y6R7 5405 aaPredicted RBP6.15□□□□□ -1.42
RPL38-205ENST00000530646 KRTAP19-6Q3LI70 58 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms