RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 ZCCHC13Q8WW36 166 aaKnown RBP4.66□□□□□ -1.66
SSBP3-212ENST00000528930 NDUFB1O75438 58 aa4.65□□□□□ -1.67
SSBP3-212ENST00000528930 LIMD2Q9BT23 127 aa4.65□□□□□ -1.67
SSBP3-212ENST00000528930 PMAIP1Q13794 54 aa4.64□□□□□ -1.67
SSBP3-212ENST00000528930 H3BPC8 53 aa4.63□□□□□ -1.67
SSBP3-212ENST00000528930 IGLV8-61A0A075B6I0 122 aa4.62□□□□□ -1.67
SSBP3-212ENST00000528930 SPANXA2-OT1Q8N9U9 137 aa4.6□□□□□ -1.67
SSBP3-212ENST00000528930 FLGP20930 4061 aaPredicted RBP4.6□□□□□ -1.67
SSBP3-212ENST00000528930 SEC61BP60468 96 aaKnown RBP4.59□□□□□ -1.67
SSBP3-212ENST00000528930 IGFL1Q6UW32 110 aa4.59□□□□□ -1.67
SSBP3-212ENST00000528930 C9orf92A6NGG3 77 aa4.58□□□□□ -1.68
SSBP3-212ENST00000528930 IGKV2-30P06310 120 aa4.57□□□□□ -1.68
SSBP3-212ENST00000528930 C1orf64Q8NEQ6 169 aa4.57□□□□□ -1.68
SSBP3-212ENST00000528930 MPLKIPQ8TAP9 179 aa4.57□□□□□ -1.68
SSBP3-212ENST00000528930 M0R2T5 61 aa4.56□□□□□ -1.68
SSBP3-212ENST00000528930 TRAV22A0A0B4J277 110 aa4.55□□□□□ -1.68
SSBP3-212ENST00000528930 HCG22E2RYF7 251 aa4.55□□□□□ -1.68
SSBP3-212ENST00000528930 MUC12Q9UKN1 5478 aa4.53□□□□□ -1.68
SSBP3-212ENST00000528930 NDUFS5O43920 106 aa4.53□□□□□ -1.68
SSBP3-212ENST00000528930 MP68P56378 58 aa4.53□□□□□ -1.68
SSBP3-212ENST00000528930 PCOTHQ58A44 107 aa4.53□□□□□ -1.68
SSBP3-212ENST00000528930 ATP11AUNQ6ZP68 121 aa4.53□□□□□ -1.68
SSBP3-212ENST00000528930 LOC101927531A0A1B0GV80 90 aa4.52□□□□□ -1.69
SSBP3-212ENST00000528930 A0A1W2PNM2 257 aa4.52□□□□□ -1.69
SSBP3-212ENST00000528930 DSCR10P59022 87 aa4.51□□□□□ -1.69
SSBP3-212ENST00000528930 RPL37P61927 97 aaKnown RBP4.5□□□□□ -1.69
SSBP3-212ENST00000528930 LCE1EQ5T753 118 aa4.5□□□□□ -1.69
SSBP3-212ENST00000528930 Q75L30 129 aa4.49□□□□□ -1.69
SSBP3-212ENST00000528930 KTN1-AS1Q86SY8 53 aa4.49□□□□□ -1.69
SSBP3-212ENST00000528930 Q8N9L7 120 aa4.49□□□□□ -1.69
SSBP3-212ENST00000528930 KRTAP19-6Q3LI70 58 aa4.48□□□□□ -1.69
SSBP3-212ENST00000528930 Q5VV11 94 aa4.48□□□□□ -1.69
SSBP3-212ENST00000528930 A0A087WSZ3 146 aa4.47□□□□□ -1.69
SSBP3-212ENST00000528930 Q96NJ1 140 aa4.47□□□□□ -1.69
SSBP3-212ENST00000528930 LINC00208Q96KT6 92 aa4.46□□□□□ -1.7
SSBP3-212ENST00000528930 GPR98Q8WXG9 6306 aa4.45□□□□□ -1.7
SSBP3-212ENST00000528930 A8MUN3 132 aa4.44□□□□□ -1.7
SSBP3-212ENST00000528930 KRTAP2-3P0C7H8 128 aa4.44□□□□□ -1.7
SSBP3-212ENST00000528930 KRTAP2-4Q9BYR9 128 aa4.44□□□□□ -1.7
SSBP3-212ENST00000528930 CDC42SE1Q9NRR8 79 aa4.44□□□□□ -1.7
SSBP3-212ENST00000528930 K7EQZ3 153 aa4.43□□□□□ -1.7
SSBP3-212ENST00000528930 PSPHP1O15172 72 aa4.43□□□□□ -1.7
SSBP3-212ENST00000528930 LINC01558Q9Y6Z2 57 aa4.43□□□□□ -1.7
SSBP3-212ENST00000528930 A6NN06 94 aa4.42□□□□□ -1.7
SSBP3-212ENST00000528930 CHKB-CPT1BH3BT56 60 aa4.42□□□□□ -1.7
SSBP3-212ENST00000528930 TP53AIP1Q9HCN2 124 aa4.42□□□□□ -1.7
SSBP3-212ENST00000528930 C20orf166-AS1Q96NR2 134 aa4.41□□□□□ -1.7
SSBP3-212ENST00000528930 A8MUU9 505 aa4.4□□□□□ -1.71
SSBP3-212ENST00000528930 LINC00472Q9H8W2 130 aa4.4□□□□□ -1.71
SSBP3-212ENST00000528930 A8MWP4 228 aa4.39□□□□□ -1.71
SSBP3-212ENST00000528930 KMT2DO14686 5537 aa4.39□□□□□ -1.71
SSBP3-212ENST00000528930 H0Y9P7 68 aa4.38□□□□□ -1.71
SSBP3-212ENST00000528930 DEFB116Q30KQ4 102 aa4.38□□□□□ -1.71
SSBP3-212ENST00000528930 C7orf65Q6ZTY9 151 aa4.38□□□□□ -1.71
SSBP3-212ENST00000528930 LCA10Q71F78 164 aa4.38□□□□□ -1.71
SSBP3-212ENST00000528930 RBM12B-AS1Q9P1G2 102 aa4.38□□□□□ -1.71
SSBP3-212ENST00000528930 KRTAP16-1A8MUX0 517 aa4.37□□□□□ -1.71
SSBP3-212ENST00000528930 CASC2Q6XLA1 102 aa4.37□□□□□ -1.71
SSBP3-212ENST00000528930 NOTCH2NLQ7Z3S9 236 aa4.36□□□□□ -1.71
SSBP3-212ENST00000528930 PRR15LQ9BU68 103 aa4.36□□□□□ -1.71
SSBP3-212ENST00000528930 LINC00313P59037 77 aa4.35□□□□□ -1.71
SSBP3-212ENST00000528930 COA5Q86WW8 74 aa4.35□□□□□ -1.71
SSBP3-212ENST00000528930 A6NED7 52 aa4.34□□□□□ -1.71
SSBP3-212ENST00000528930 COX6B2Q6YFQ2 88 aa4.33□□□□□ -1.72
SSBP3-212ENST00000528930 IGHV6-1A0A0B4J1U7 121 aa4.32□□□□□ -1.72
SSBP3-212ENST00000528930 WFDC13Q8IUB5 93 aa4.32□□□□□ -1.72
SSBP3-212ENST00000528930 IGKV2D-30A0A075B6S6 120 aa4.31□□□□□ -1.72
SSBP3-212ENST00000528930 A0A1B0GVX0 72 aa4.31□□□□□ -1.72
SSBP3-212ENST00000528930 KRTAP5-1Q6L8H4 278 aa4.31□□□□□ -1.72
SSBP3-212ENST00000528930 MMP24-AS1A0A0U1RRL7 71 aa4.3□□□□□ -1.72
SSBP3-212ENST00000528930 MT2AP02795 61 aa4.3□□□□□ -1.72
SSBP3-212ENST00000528930 C8orf87E5RJ46 101 aa4.29□□□□□ -1.72
SSBP3-212ENST00000528930 SPTSSBQ8NFR3 76 aa4.29□□□□□ -1.72
SSBP3-212ENST00000528930 A8MU10 97 aa4.26□□□□□ -1.73
SSBP3-212ENST00000528930 MT1FP04733 61 aa4.26□□□□□ -1.73
SSBP3-212ENST00000528930 KRTAP5-9P26371 169 aa4.26□□□□□ -1.73
SSBP3-212ENST00000528930 HRES1P13985 223 aa4.25□□□□□ -1.73
SSBP3-212ENST00000528930 KRTAP2-1Q9BYU5 128 aa4.24□□□□□ -1.73
SSBP3-212ENST00000528930 C8orf17Q9NRJ1 99 aa4.24□□□□□ -1.73
SSBP3-212ENST00000528930 MDN1Q9NU22 5596 aa4.24□□□□□ -1.73
SSBP3-212ENST00000528930 ACYP2P14621 99 aa4.23□□□□□ -1.73
SSBP3-212ENST00000528930 SPATA8Q6RVD6 105 aa4.23□□□□□ -1.73
SSBP3-212ENST00000528930 MRPL34Q9BQ48 92 aaKnown RBP4.21□□□□□ -1.74
SSBP3-212ENST00000528930 SPINK7P58062 85 aa4.2□□□□□ -1.74
SSBP3-212ENST00000528930 LINC01554Q52M75 96 aa4.18□□□□□ -1.74
SSBP3-212ENST00000528930 DMAC1Q96GE9 116 aa4.17□□□□□ -1.74
SSBP3-212ENST00000528930 KRTAP4-4Q9BYR3 166 aa4.15□□□□□ -1.75
SSBP3-212ENST00000528930 UQCR11O14957 56 aa4.14□□□□□ -1.75
SSBP3-212ENST00000528930 KRTAP10-10P60014 251 aa4.14□□□□□ -1.75
SSBP3-212ENST00000528930 KRTAP5-4Q6L8H1 288 aa4.13□□□□□ -1.75
SSBP3-212ENST00000528930 A0A1B0GU69 56 aa4.11□□□□□ -1.75
SSBP3-212ENST00000528930 MIR22HGQ0VDD5 57 aa4.1□□□□□ -1.75
SSBP3-212ENST00000528930 Q5W150 140 aa4.1□□□□□ -1.75
SSBP3-212ENST00000528930 KRTAP10-5P60370 271 aa4.07□□□□□ -1.76
SSBP3-212ENST00000528930 H1FX-AS1Q4G0G2 97 aa4.03□□□□□ -1.76
SSBP3-212ENST00000528930 PRAC1Q96KF2 57 aa4.03□□□□□ -1.76
SSBP3-212ENST00000528930 SPRR2EP22531 72 aa4□□□□□ -1.77
SSBP3-212ENST00000528930 MT3P25713 68 aa4□□□□□ -1.77
SSBP3-212ENST00000528930 SPRR2BP35325 72 aa4□□□□□ -1.77
SSBP3-212ENST00000528930 SPRR2AP35326 72 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms