RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 PKHD1L1Q86WI1 4243 aa7.53□□□□□ -1.2
CAPN1-214ENST00000528165 C10orf95Q9H7T3 257 aa7.51□□□□□ -1.21
CAPN1-214ENST00000528165 PKHD1P08F94 4074 aa7.51□□□□□ -1.21
CAPN1-214ENST00000528165 S4R3F8 94 aa7.48□□□□□ -1.21
CAPN1-214ENST00000528165 KRTAP10-4P60372 401 aaPredicted RBP7.46□□□□□ -1.22
CAPN1-214ENST00000528165 APOBP04114 4563 aaKnown RBP7.41□□□□□ -1.22
CAPN1-214ENST00000528165 KRTAP15-1Q3LI76 137 aa7.41□□□□□ -1.22
CAPN1-214ENST00000528165 FAT1Q14517 4588 aa7.41□□□□□ -1.22
CAPN1-214ENST00000528165 KRTAP12-2P59991 146 aa7.4□□□□□ -1.22
CAPN1-214ENST00000528165 NDUFAF8A1L188 74 aa7.39□□□□□ -1.23
CAPN1-214ENST00000528165 KRTAP10-8P60410 259 aa7.39□□□□□ -1.23
CAPN1-214ENST00000528165 KRTAP21-3Q3LHN1 58 aa7.38□□□□□ -1.23
CAPN1-214ENST00000528165 DYNC1H1Q14204 4646 aaKnown RBP7.38□□□□□ -1.23
CAPN1-214ENST00000528165 KRTAP12-1P59990 96 aa7.32□□□□□ -1.24
CAPN1-214ENST00000528165 XP32Q5T750 250 aa7.3□□□□□ -1.24
CAPN1-214ENST00000528165 A0A1B0GVY2 172 aa7.29□□□□□ -1.24
CAPN1-214ENST00000528165 FAT3Q8TDW7 4589 aa7.26□□□□□ -1.25
CAPN1-214ENST00000528165 HSPG2P98160 4391 aa7.23□□□□□ -1.25
CAPN1-214ENST00000528165 LRP1Q07954 4544 aaKnown RBP7.22□□□□□ -1.25
CAPN1-214ENST00000528165 M0QZ58 72 aa7.21□□□□□ -1.25
CAPN1-214ENST00000528165 KMT2CQ8NEZ4 4911 aaKnown RBP7.15□□□□□ -1.26
CAPN1-214ENST00000528165 TNXBP22105 4242 aa7.15□□□□□ -1.26
CAPN1-214ENST00000528165 MYCBP2O75592 4640 aa7.11□□□□□ -1.27
CAPN1-214ENST00000528165 Q5VSD8 79 aa7.05□□□□□ -1.28
CAPN1-214ENST00000528165 A0A0A0MQY5 61 aa7.03□□□□□ -1.28
CAPN1-214ENST00000528165 RYR2Q92736 4967 aa7.02□□□□□ -1.29
CAPN1-214ENST00000528165 R4GN34 69 aa6.99□□□□□ -1.29
CAPN1-214ENST00000528165 RYR3Q15413 4870 aa6.97□□□□□ -1.29
CAPN1-214ENST00000528165 PLAC4Q8WY50 150 aa6.96□□□□□ -1.3
CAPN1-214ENST00000528165 LPAP08519 4548 aa6.93□□□□□ -1.3
CAPN1-214ENST00000528165 MT1HL1P0DM35 61 aa6.88□□□□□ -1.31
CAPN1-214ENST00000528165 LRP2P98164 4655 aa6.84□□□□□ -1.32
CAPN1-214ENST00000528165 LORP23490 312 aaPredicted RBP6.78□□□□□ -1.32
CAPN1-214ENST00000528165 KRTAP17-1Q9BYP8 105 aa6.78□□□□□ -1.32
CAPN1-214ENST00000528165 LUZP6Q538Z0 58 aa6.77□□□□□ -1.32
CAPN1-214ENST00000528165 PP632Q6XCG6 107 aa6.75□□□□□ -1.33
CAPN1-214ENST00000528165 EPPK1P58107 5090 aaKnown RBP6.73□□□□□ -1.33
CAPN1-214ENST00000528165 RYR1P21817 5038 aa6.72□□□□□ -1.33
CAPN1-214ENST00000528165 CAMK2N1Q7Z7J9 78 aa6.69□□□□□ -1.34
CAPN1-214ENST00000528165 KIAA1109Q2LD37 5005 aa6.67□□□□□ -1.34
CAPN1-214ENST00000528165 SEC61BP60468 96 aaKnown RBP6.63□□□□□ -1.35
CAPN1-214ENST00000528165 MUC17Q685J3 4493 aa6.51□□□□□ -1.37
CAPN1-214ENST00000528165 KRTAP4-1Q9BYQ7 146 aa6.51□□□□□ -1.37
CAPN1-214ENST00000528165 ABCA13Q86UQ4 5058 aa6.5□□□□□ -1.37
CAPN1-214ENST00000528165 TNP1P09430 55 aa6.47□□□□□ -1.37
CAPN1-214ENST00000528165 KRTAP19-2Q3LHN2 52 aa6.41□□□□□ -1.38
CAPN1-214ENST00000528165 KRTAP23-1A1A580 65 aa6.4□□□□□ -1.38
CAPN1-214ENST00000528165 SPRR5A0A1B0GTR4 108 aa6.38□□□□□ -1.39
CAPN1-214ENST00000528165 KRTAP4-5Q9BYR2 181 aa6.36□□□□□ -1.39
CAPN1-214ENST00000528165 J3QL48 77 aa6.32□□□□□ -1.4
CAPN1-214ENST00000528165 HERC2O95714 4834 aa6.27□□□□□ -1.41
CAPN1-214ENST00000528165 BIRC6Q9NR09 4857 aa6.23□□□□□ -1.41
CAPN1-214ENST00000528165 FLGP20930 4061 aaPredicted RBP6.2□□□□□ -1.42
CAPN1-214ENST00000528165 MUC2Q02817 5179 aa6.13□□□□□ -1.43
CAPN1-214ENST00000528165 PCLOQ9Y6V0 5065 aa6.13□□□□□ -1.43
CAPN1-214ENST00000528165 HERC1Q15751 4861 aa6.1□□□□□ -1.43
CAPN1-214ENST00000528165 LCE3AQ5TA76 89 aa6.06□□□□□ -1.44
CAPN1-214ENST00000528165 SPRR2GQ9BYE4 73 aa6.05□□□□□ -1.44
CAPN1-214ENST00000528165 PRO2289Q9P1D8 64 aa6.02□□□□□ -1.45
CAPN1-214ENST00000528165 KRTAP19-1Q8IUB9 90 aa6□□□□□ -1.45
CAPN1-214ENST00000528165 INE1O15225 51 aa5.92□□□□□ -1.46
CAPN1-214ENST00000528165 LCE2CQ5TA81 110 aa5.89□□□□□ -1.47
CAPN1-214ENST00000528165 KRTAP8-1Q8IUC2 63 aa5.89□□□□□ -1.47
CAPN1-214ENST00000528165 M0R2T5 61 aa5.88□□□□□ -1.47
CAPN1-214ENST00000528165 HMCN2Q8NDA2 5059 aa5.83□□□□□ -1.48
CAPN1-214ENST00000528165 FAT4Q6V0I7 4981 aa5.82□□□□□ -1.48
CAPN1-214ENST00000528165 KRTAP10-10P60014 251 aa5.8□□□□□ -1.48
CAPN1-214ENST00000528165 RNF213Q63HN8 5207 aa5.78□□□□□ -1.48
CAPN1-214ENST00000528165 UBR4Q5T4S7 5183 aa5.77□□□□□ -1.49
CAPN1-214ENST00000528165 KRTAP12-3P60328 96 aa5.76□□□□□ -1.49
CAPN1-214ENST00000528165 MT1FP04733 61 aa5.75□□□□□ -1.49
CAPN1-214ENST00000528165 MT2AP02795 61 aa5.74□□□□□ -1.49
CAPN1-214ENST00000528165 MT1HP80294 61 aa5.73□□□□□ -1.49
CAPN1-214ENST00000528165 KRTAP10-12P60413 245 aa5.71□□□□□ -1.5
CAPN1-214ENST00000528165 KRTAP19-8Q3LI54 63 aa5.71□□□□□ -1.5
CAPN1-214ENST00000528165 KRTAP10-5P60370 271 aa5.7□□□□□ -1.5
CAPN1-214ENST00000528165 MT1XP80297 61 aa5.68□□□□□ -1.5
CAPN1-214ENST00000528165 KRTAP9-8Q9BYQ0 159 aa5.65□□□□□ -1.51
CAPN1-214ENST00000528165 MT1BP07438 61 aa5.63□□□□□ -1.51
CAPN1-214ENST00000528165 KRTAP10-7P60409 375 aaPredicted RBP5.56□□□□□ -1.52
CAPN1-214ENST00000528165 LCE3CQ5T5A8 94 aa5.43□□□□□ -1.54
CAPN1-214ENST00000528165 KRTAP19-5Q3LI72 72 aa5.4□□□□□ -1.55
CAPN1-214ENST00000528165 KRTAP9-3Q9BYQ3 159 aa5.38□□□□□ -1.55
CAPN1-214ENST00000528165 KRTAP9-6A8MVA2 160 aa5.25□□□□□ -1.57
CAPN1-214ENST00000528165 KRTAP2-3P0C7H8 128 aa5.18□□□□□ -1.58
CAPN1-214ENST00000528165 KRTAP2-4Q9BYR9 128 aa5.18□□□□□ -1.58
CAPN1-214ENST00000528165 KRTAP2-1Q9BYU5 128 aa5.18□□□□□ -1.58
CAPN1-214ENST00000528165 KMT2DO14686 5537 aa5.15□□□□□ -1.59
CAPN1-214ENST00000528165 KRTAP4-8A0A0G2JLE6 195 aa5.15□□□□□ -1.59
CAPN1-214ENST00000528165 KRTAP4-8Q9BYQ9 185 aa5.15□□□□□ -1.59
CAPN1-214ENST00000528165 LCE2BO14633 110 aa5.13□□□□□ -1.59
CAPN1-214ENST00000528165 KRTAP4-7Q9BYR0 210 aa5.08□□□□□ -1.6
CAPN1-214ENST00000528165 KRTAP19-7Q3SYF9 63 aa5.05□□□□□ -1.6
CAPN1-214ENST00000528165 USH2AO75445 5202 aa5.03□□□□□ -1.6
CAPN1-214ENST00000528165 KRTAP19-4Q3LI73 84 aa5.01□□□□□ -1.61
CAPN1-214ENST00000528165 LCE2AQ5TA79 106 aaPredicted RBP4.97□□□□□ -1.61
CAPN1-214ENST00000528165 MT1LQ93083 61 aa4.94□□□□□ -1.62
CAPN1-214ENST00000528165 FSIP2Q5CZC0 6907 aa4.92□□□□□ -1.62
CAPN1-214ENST00000528165 MT1EP04732 61 aa4.89□□□□□ -1.63
CAPN1-214ENST00000528165 LOC100996750A0A140TA64 210 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms