RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 GTF2H5Q6ZYL4 71 aa9.74□□□□□ -0.85
TRAPPC4-208ENST00000527680 ETDBQ3ZM63 59 aa9.72□□□□□ -0.85
TRAPPC4-208ENST00000527680 F8W1H4 67 aa9.71□□□□□ -0.86
TRAPPC4-208ENST00000527680 KRTAP5-9P26371 169 aa9.71□□□□□ -0.86
TRAPPC4-208ENST00000527680 NDUFC1O43677 76 aa9.68□□□□□ -0.86
TRAPPC4-208ENST00000527680 KMT2DO14686 5537 aa9.58□□□□□ -0.88
TRAPPC4-208ENST00000527680 H0YAA0 97 aa9.58□□□□□ -0.88
TRAPPC4-208ENST00000527680 H0Y9P7 68 aa9.57□□□□□ -0.88
TRAPPC4-208ENST00000527680 UQCRQO14949 82 aa9.57□□□□□ -0.88
TRAPPC4-208ENST00000527680 HIST1H4AP62805 103 aaKnown RBP9.57□□□□□ -0.88
TRAPPC4-208ENST00000527680 ATOX1O00244 68 aa9.56□□□□□ -0.88
TRAPPC4-208ENST00000527680 ACYP1P07311 99 aa9.56□□□□□ -0.88
TRAPPC4-208ENST00000527680 ADM2Q7Z4H4 148 aa9.56□□□□□ -0.88
TRAPPC4-208ENST00000527680 MDN1Q9NU22 5596 aa9.52□□□□□ -0.89
TRAPPC4-208ENST00000527680 A8MUN3 132 aa9.52□□□□□ -0.89
TRAPPC4-208ENST00000527680 PRO2289Q9P1D8 64 aa9.51□□□□□ -0.89
TRAPPC4-208ENST00000527680 ATP5EP2Q5VTU8 51 aa9.48□□□□□ -0.89
TRAPPC4-208ENST00000527680 PLAC4Q8WY50 150 aa9.46□□□□□ -0.9
TRAPPC4-208ENST00000527680 SPRR2FQ96RM1 72 aa9.45□□□□□ -0.9
TRAPPC4-208ENST00000527680 PCP4L1A6NKN8 68 aa9.43□□□□□ -0.9
TRAPPC4-208ENST00000527680 KRTAP2-3P0C7H8 128 aa9.43□□□□□ -0.9
TRAPPC4-208ENST00000527680 KRTAP2-4Q9BYR9 128 aa9.43□□□□□ -0.9
TRAPPC4-208ENST00000527680 LINC00208Q96KT6 92 aa9.41□□□□□ -0.9
TRAPPC4-208ENST00000527680 FAM240AA0A1B0GVK7 77 aa9.39□□□□□ -0.91
TRAPPC4-208ENST00000527680 SPRR2EP22531 72 aa9.38□□□□□ -0.91
TRAPPC4-208ENST00000527680 SPRR2BP35325 72 aa9.38□□□□□ -0.91
TRAPPC4-208ENST00000527680 SPRR2AP35326 72 aa9.38□□□□□ -0.91
TRAPPC4-208ENST00000527680 MT1XP80297 61 aa9.38□□□□□ -0.91
TRAPPC4-208ENST00000527680 R4GN34 69 aa9.35□□□□□ -0.91
TRAPPC4-208ENST00000527680 KRTAP8-1Q8IUC2 63 aa9.33□□□□□ -0.92
TRAPPC4-208ENST00000527680 MP68P56378 58 aa9.32□□□□□ -0.92
TRAPPC4-208ENST00000527680 C20orf197Q8N268 126 aa9.28□□□□□ -0.92
TRAPPC4-208ENST00000527680 LINC00643Q86TS7 51 aa9.27□□□□□ -0.93
TRAPPC4-208ENST00000527680 P0C880 135 aa9.26□□□□□ -0.93
TRAPPC4-208ENST00000527680 M0QZ58 72 aa9.25□□□□□ -0.93
TRAPPC4-208ENST00000527680 OCR1Q9BZK8 76 aa9.21□□□□□ -0.94
TRAPPC4-208ENST00000527680 KRTAP12-2P59991 146 aa9.2□□□□□ -0.94
TRAPPC4-208ENST00000527680 LINC01554Q52M75 96 aa9.19□□□□□ -0.94
TRAPPC4-208ENST00000527680 LCE1AQ5T7P2 110 aa9.16□□□□□ -0.94
TRAPPC4-208ENST00000527680 KRTAP4-8A0A0G2JLE6 195 aa9.11□□□□□ -0.95
TRAPPC4-208ENST00000527680 KRTAP4-8Q9BYQ9 185 aa9.11□□□□□ -0.95
TRAPPC4-208ENST00000527680 KRTAP2-2Q9BYT5 123 aa9.11□□□□□ -0.95
TRAPPC4-208ENST00000527680 KRTAP2-1Q9BYU5 128 aa9.11□□□□□ -0.95
TRAPPC4-208ENST00000527680 H3BPC8 53 aa9.09□□□□□ -0.95
TRAPPC4-208ENST00000527680 DMAC1Q96GE9 116 aa9.09□□□□□ -0.95
TRAPPC4-208ENST00000527680 KRTAP3-2Q9BYR7 98 aa9.08□□□□□ -0.96
TRAPPC4-208ENST00000527680 SPRR2DP22532 72 aa9.07□□□□□ -0.96
TRAPPC4-208ENST00000527680 SCGB1A1P11684 91 aa9.03□□□□□ -0.96
TRAPPC4-208ENST00000527680 KRTAP10-7P60409 375 aaPredicted RBP8.97□□□□□ -0.97
TRAPPC4-208ENST00000527680 MT-ATP8P03928 68 aa8.95□□□□□ -0.98
TRAPPC4-208ENST00000527680 TRAV7A0A075B6U4 112 aa8.92□□□□□ -0.98
TRAPPC4-208ENST00000527680 KRTAP10-12P60413 245 aa8.9□□□□□ -0.98
TRAPPC4-208ENST00000527680 ACYP2P14621 99 aa8.89□□□□□ -0.99
TRAPPC4-208ENST00000527680 SPTSSBQ8NFR3 76 aa8.86□□□□□ -0.99
TRAPPC4-208ENST00000527680 J3QR89 54 aa8.84□□□□□ -0.99
TRAPPC4-208ENST00000527680 LCE3BQ5TA77 95 aa8.84□□□□□ -0.99
TRAPPC4-208ENST00000527680 A0A1B0GV90 55 aa8.83□□□□□ -1
TRAPPC4-208ENST00000527680 CHKB-CPT1BH3BT56 60 aa8.76□□□□□ -1.01
TRAPPC4-208ENST00000527680 SMIM20Q8N5G0 67 aa8.62□□□□□ -1.03
TRAPPC4-208ENST00000527680 CAMK2N1Q7Z7J9 78 aa8.59□□□□□ -1.03
TRAPPC4-208ENST00000527680 SNURFQ9Y675 71 aa8.52□□□□□ -1.05
TRAPPC4-208ENST00000527680 KRTAP13-4Q3LI77 160 aa8.5□□□□□ -1.05
TRAPPC4-208ENST00000527680 DSTQ03001 7570 aaKnown RBP8.42□□□□□ -1.06
TRAPPC4-208ENST00000527680 SPANXA2-OT1Q8N9U9 137 aa8.4□□□□□ -1.06
TRAPPC4-208ENST00000527680 LCE5AQ5TCM9 118 aa8.38□□□□□ -1.07
TRAPPC4-208ENST00000527680 KRTAP19-7Q3SYF9 63 aa8.37□□□□□ -1.07
TRAPPC4-208ENST00000527680 KRTAP19-3Q7Z4W3 81 aa8.34□□□□□ -1.07
TRAPPC4-208ENST00000527680 K7ERU9 68 aa8.33□□□□□ -1.08
TRAPPC4-208ENST00000527680 MT1EP04732 61 aa8.33□□□□□ -1.08
TRAPPC4-208ENST00000527680 KRTAP4-9Q9BYQ8 210 aa8.32□□□□□ -1.08
TRAPPC4-208ENST00000527680 A0A0D9SG42 100 aa8.31□□□□□ -1.08
TRAPPC4-208ENST00000527680 SEC61GP60059 68 aa8.28□□□□□ -1.08
TRAPPC4-208ENST00000527680 SERP1Q9Y6X1 66 aa8.27□□□□□ -1.09
TRAPPC4-208ENST00000527680 GPR98Q8WXG9 6306 aa8.26□□□□□ -1.09
TRAPPC4-208ENST00000527680 SPINT4Q6UDR6 99 aa8.23□□□□□ -1.09
TRAPPC4-208ENST00000527680 COA5Q86WW8 74 aa8.22□□□□□ -1.09
TRAPPC4-208ENST00000527680 SERP2Q8N6R1 65 aa8.22□□□□□ -1.09
TRAPPC4-208ENST00000527680 SPATA8Q6RVD6 105 aa8.19□□□□□ -1.1
TRAPPC4-208ENST00000527680 CYSTM1Q9H1C7 97 aa8.19□□□□□ -1.1
TRAPPC4-208ENST00000527680 KRTAP19-5Q3LI72 72 aa8.14□□□□□ -1.11
TRAPPC4-208ENST00000527680 MT1GP13640 62 aa8.13□□□□□ -1.11
TRAPPC4-208ENST00000527680 A0A1B0GU33 70 aa8.12□□□□□ -1.11
TRAPPC4-208ENST00000527680 PP632Q6XCG6 107 aa8.1□□□□□ -1.11
TRAPPC4-208ENST00000527680 LCE1DQ5T752 114 aa8.05□□□□□ -1.12
TRAPPC4-208ENST00000527680 KRTAP12-1P59990 96 aa8.04□□□□□ -1.12
TRAPPC4-208ENST00000527680 PCP4P48539 62 aa8□□□□□ -1.13
TRAPPC4-208ENST00000527680 MT4P47944 62 aa7.98□□□□□ -1.13
TRAPPC4-208ENST00000527680 LCE4AQ5TA78 99 aa7.97□□□□□ -1.13
TRAPPC4-208ENST00000527680 MT1MQ8N339 61 aa7.96□□□□□ -1.14
TRAPPC4-208ENST00000527680 MT1LQ93083 61 aa7.92□□□□□ -1.14
TRAPPC4-208ENST00000527680 SMIM26A0A096LP01 95 aa7.9□□□□□ -1.14
TRAPPC4-208ENST00000527680 COX7CP15954 63 aa7.86□□□□□ -1.15
TRAPPC4-208ENST00000527680 A0A1B0GU69 56 aa7.85□□□□□ -1.15
TRAPPC4-208ENST00000527680 C10orf95Q9H7T3 257 aa7.83□□□□□ -1.16
TRAPPC4-208ENST00000527680 A8MU10 97 aa7.82□□□□□ -1.16
TRAPPC4-208ENST00000527680 TNP1P09430 55 aa7.81□□□□□ -1.16
TRAPPC4-208ENST00000527680 LCE3AQ5TA76 89 aa7.81□□□□□ -1.16
TRAPPC4-208ENST00000527680 KRTAP4-3Q9BYR4 195 aa7.81□□□□□ -1.16
TRAPPC4-208ENST00000527680 HMCN1Q96RW7 5635 aa7.81□□□□□ -1.16
TRAPPC4-208ENST00000527680 H7BZZ5 65 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms