RNA–Protein interactions for RNA: ENST00000524432.5

MACF1-227, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 4,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-227ENST00000524432 KRTAP3-3Q9BYR6 98 aa8.44□□□□□ -1.06
MACF1-227ENST00000524432 MT1HL1P0DM35 61 aa8.43□□□□□ -1.06
MACF1-227ENST00000524432 VPS13DQ5THJ4 4388 aa8.42□□□□□ -1.06
MACF1-227ENST00000524432 LRP1BQ9NZR2 4599 aa8.41□□□□□ -1.06
MACF1-227ENST00000524432 DNAH8Q96JB1 4490 aa8.41□□□□□ -1.06
MACF1-227ENST00000524432 KMT2AQ03164 3969 aa8.39□□□□□ -1.07
MACF1-227ENST00000524432 KRTAP3-2Q9BYR7 98 aa8.38□□□□□ -1.07
MACF1-227ENST00000524432 LYSTQ99698 3801 aa8.37□□□□□ -1.07
MACF1-227ENST00000524432 DNAH17Q9UFH2 4485 aa8.34□□□□□ -1.07
MACF1-227ENST00000524432 PP632Q6XCG6 107 aa8.33□□□□□ -1.08
MACF1-227ENST00000524432 KRTAP10-10P60014 251 aa8.29□□□□□ -1.08
MACF1-227ENST00000524432 DNAH2Q9P225 4427 aa8.28□□□□□ -1.08
MACF1-227ENST00000524432 KRTAP4-5Q9BYR2 181 aa8.27□□□□□ -1.09
MACF1-227ENST00000524432 DYNC1H1Q14204 4646 aaKnown RBP8.23□□□□□ -1.09
MACF1-227ENST00000524432 MYCBP2O75592 4640 aa8.18□□□□□ -1.1
MACF1-227ENST00000524432 FRAS1Q86XX4 4008 aa8.15□□□□□ -1.11
MACF1-227ENST00000524432 DNAH7Q8WXX0 4024 aa8.12□□□□□ -1.11
MACF1-227ENST00000524432 DNAH3Q8TD57 4116 aa8.09□□□□□ -1.12
MACF1-227ENST00000524432 VPS13BQ7Z7G8 4022 aa8.08□□□□□ -1.12
MACF1-227ENST00000524432 CMYA5Q8N3K9 4069 aa8.06□□□□□ -1.12
MACF1-227ENST00000524432 DNAH6Q9C0G6 4158 aa8.05□□□□□ -1.12
MACF1-227ENST00000524432 RYR1P21817 5038 aa8.04□□□□□ -1.12
MACF1-227ENST00000524432 ALMS1Q8TCU4 4167 aa8.02□□□□□ -1.13
MACF1-227ENST00000524432 KIAA1109Q2LD37 5005 aa7.99□□□□□ -1.13
MACF1-227ENST00000524432 SACSQ9NZJ4 4579 aa7.98□□□□□ -1.13
MACF1-227ENST00000524432 DYNC2H1Q8NCM8 4307 aaKnown RBP7.97□□□□□ -1.13
MACF1-227ENST00000524432 LORP23490 312 aaPredicted RBP7.97□□□□□ -1.13
MACF1-227ENST00000524432 LRP1Q07954 4544 aaKnown RBP7.93□□□□□ -1.14
MACF1-227ENST00000524432 FAT3Q8TDW7 4589 aa7.91□□□□□ -1.14
MACF1-227ENST00000524432 HECTD4Q9Y4D8 3996 aa7.91□□□□□ -1.14
MACF1-227ENST00000524432 KRTAP15-1Q3LI76 137 aa7.85□□□□□ -1.15
MACF1-227ENST00000524432 FAT2Q9NYQ8 4349 aa7.84□□□□□ -1.15
MACF1-227ENST00000524432 PRO2289Q9P1D8 64 aa7.84□□□□□ -1.16
MACF1-227ENST00000524432 APOBP04114 4563 aaKnown RBP7.83□□□□□ -1.16
MACF1-227ENST00000524432 HYDINQ4G0P3 5121 aa7.82□□□□□ -1.16
MACF1-227ENST00000524432 RYR3Q15413 4870 aa7.77□□□□□ -1.17
MACF1-227ENST00000524432 KRTAP4-1Q9BYQ7 146 aa7.74□□□□□ -1.17
MACF1-227ENST00000524432 PKHD1P08F94 4074 aa7.74□□□□□ -1.17
MACF1-227ENST00000524432 KRTAP17-1Q9BYP8 105 aa7.69□□□□□ -1.18
MACF1-227ENST00000524432 LRP2P98164 4655 aa7.58□□□□□ -1.2
MACF1-227ENST00000524432 RYR2Q92736 4967 aa7.45□□□□□ -1.22
MACF1-227ENST00000524432 KMT2CQ8NEZ4 4911 aaKnown RBP7.44□□□□□ -1.22
MACF1-227ENST00000524432 LCE3AQ5TA76 89 aa7.37□□□□□ -1.23
MACF1-227ENST00000524432 PKD1P98161 4303 aa7.35□□□□□ -1.23
MACF1-227ENST00000524432 KRTAP10-12P60413 245 aa7.34□□□□□ -1.23
MACF1-227ENST00000524432 HERC2O95714 4834 aa7.3□□□□□ -1.24
MACF1-227ENST00000524432 HSPG2P98160 4391 aa7.26□□□□□ -1.25
MACF1-227ENST00000524432 KRTAP12-3P60328 96 aa7.25□□□□□ -1.25
MACF1-227ENST00000524432 LPAP08519 4548 aa7.23□□□□□ -1.25
MACF1-227ENST00000524432 KRTAP23-1A1A580 65 aa7.18□□□□□ -1.26
MACF1-227ENST00000524432 MT1HP80294 61 aa7.17□□□□□ -1.26
MACF1-227ENST00000524432 MT2AP02795 61 aa7.12□□□□□ -1.27
MACF1-227ENST00000524432 SPRR2GQ9BYE4 73 aa7.09□□□□□ -1.27
MACF1-227ENST00000524432 MT1FP04733 61 aa7.08□□□□□ -1.28
MACF1-227ENST00000524432 EPPK1P58107 5090 aaKnown RBP6.98□□□□□ -1.29
MACF1-227ENST00000524432 PKHD1L1Q86WI1 4243 aa6.97□□□□□ -1.29
MACF1-227ENST00000524432 KRTAP19-1Q8IUB9 90 aa6.95□□□□□ -1.3
MACF1-227ENST00000524432 TNXBP22105 4242 aa6.93□□□□□ -1.3
MACF1-227ENST00000524432 CRCT1Q9UGL9 99 aa6.92□□□□□ -1.3
MACF1-227ENST00000524432 ABCA13Q86UQ4 5058 aa6.86□□□□□ -1.31
MACF1-227ENST00000524432 INE1O15225 51 aa6.84□□□□□ -1.32
MACF1-227ENST00000524432 PCLOQ9Y6V0 5065 aa6.82□□□□□ -1.32
MACF1-227ENST00000524432 MUC2Q02817 5179 aa6.77□□□□□ -1.33
MACF1-227ENST00000524432 LCE2CQ5TA81 110 aa6.75□□□□□ -1.33
MACF1-227ENST00000524432 KRTAP8-1Q8IUC2 63 aa6.74□□□□□ -1.33
MACF1-227ENST00000524432 BIRC6Q9NR09 4857 aa6.74□□□□□ -1.33
MACF1-227ENST00000524432 HERC1Q15751 4861 aa6.74□□□□□ -1.33
MACF1-227ENST00000524432 KRTAP19-2Q3LHN2 52 aa6.72□□□□□ -1.33
MACF1-227ENST00000524432 MUC17Q685J3 4493 aa6.68□□□□□ -1.34
MACF1-227ENST00000524432 KRTAP10-7P60409 375 aaPredicted RBP6.68□□□□□ -1.34
MACF1-227ENST00000524432 KRTAP19-5Q3LI72 72 aa6.66□□□□□ -1.34
MACF1-227ENST00000524432 KRTAP9-8Q9BYQ0 159 aa6.66□□□□□ -1.34
MACF1-227ENST00000524432 KRTAP19-8Q3LI54 63 aa6.63□□□□□ -1.35
MACF1-227ENST00000524432 RNF213Q63HN8 5207 aa6.61□□□□□ -1.35
MACF1-227ENST00000524432 MT1XP80297 61 aa6.61□□□□□ -1.35
MACF1-227ENST00000524432 MT1BP07438 61 aa6.6□□□□□ -1.35
MACF1-227ENST00000524432 FAT4Q6V0I7 4981 aa6.59□□□□□ -1.35
MACF1-227ENST00000524432 KRTAP10-5P60370 271 aa6.57□□□□□ -1.36
MACF1-227ENST00000524432 FLGP20930 4061 aaPredicted RBP6.54□□□□□ -1.36
MACF1-227ENST00000524432 UBR4Q5T4S7 5183 aa6.53□□□□□ -1.36
MACF1-227ENST00000524432 LCE3CQ5T5A8 94 aa6.48□□□□□ -1.37
MACF1-227ENST00000524432 FSIP2Q5CZC0 6907 aa6.45□□□□□ -1.38
MACF1-227ENST00000524432 KRTAP4-8A0A0G2JLE6 195 aa6.42□□□□□ -1.38
MACF1-227ENST00000524432 KRTAP4-8Q9BYQ9 185 aa6.42□□□□□ -1.38
MACF1-227ENST00000524432 KRTAP9-3Q9BYQ3 159 aa6.41□□□□□ -1.38
MACF1-227ENST00000524432 SPRR5A0A1B0GTR4 108 aa6.4□□□□□ -1.38
MACF1-227ENST00000524432 HMCN2Q8NDA2 5059 aa6.34□□□□□ -1.39
MACF1-227ENST00000524432 SPRR2FQ96RM1 72 aa6.24□□□□□ -1.41
MACF1-227ENST00000524432 LCE2BO14633 110 aa6.22□□□□□ -1.41
MACF1-227ENST00000524432 KRTAP4-7Q9BYR0 210 aa6.13□□□□□ -1.43
MACF1-227ENST00000524432 SYNE1Q8NF91 8797 aaKnown RBP6.11□□□□□ -1.43
MACF1-227ENST00000524432 MT1GP13640 62 aa6.01□□□□□ -1.45
MACF1-227ENST00000524432 OBSCNQ5VST9 7968 aa5.99□□□□□ -1.45
MACF1-227ENST00000524432 KRTAP19-4Q3LI73 84 aa5.9□□□□□ -1.47
MACF1-227ENST00000524432 USH2AO75445 5202 aa5.88□□□□□ -1.47
MACF1-227ENST00000524432 MT1LQ93083 61 aa5.85□□□□□ -1.47
MACF1-227ENST00000524432 LCE3BQ5TA77 95 aa5.85□□□□□ -1.47
MACF1-227ENST00000524432 MT1EP04732 61 aa5.82□□□□□ -1.48
MACF1-227ENST00000524432 KRTAP12-4P60329 112 aa5.8□□□□□ -1.48
MACF1-227ENST00000524432 DSTQ03001 7570 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms