RNA–Protein interactions for RNA: ENST00000524204.1

NPM1-212, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-212ENST00000524204 DEFB4AO15263 64 aa1.82□□□□□ -2.12
NPM1-212ENST00000524204 KRTAP10-4P60372 401 aaPredicted RBP1.82□□□□□ -2.12
NPM1-212ENST00000524204 PIGYQ3MUY2 71 aa1.82□□□□□ -2.12
NPM1-212ENST00000524204 ATP5EP2Q5VTU8 51 aa1.82□□□□□ -2.12
NPM1-212ENST00000524204 ARL14EPLP0DKL9 152 aa1.81□□□□□ -2.12
NPM1-212ENST00000524204 SPINK7P58062 85 aa1.81□□□□□ -2.12
NPM1-212ENST00000524204 RPL39P5Q59GN2 51 aa1.81□□□□□ -2.12
NPM1-212ENST00000524204 SPINK9Q5DT21 86 aa1.81□□□□□ -2.12
NPM1-212ENST00000524204 A0A087WXM4 84 aa1.8□□□□□ -2.12
NPM1-212ENST00000524204 A0A1B0GU69 56 aa1.8□□□□□ -2.12
NPM1-212ENST00000524204 PRH1P02810 166 aa1.8□□□□□ -2.12
NPM1-212ENST00000524204 MT1HL1P0DM35 61 aa1.8□□□□□ -2.12
NPM1-212ENST00000524204 MUC2Q02817 5179 aa1.79□□□□□ -2.12
NPM1-212ENST00000524204 SMR3BP02814 79 aaPredicted RBP1.79□□□□□ -2.12
NPM1-212ENST00000524204 DEFB104AQ8WTQ1 72 aa1.79□□□□□ -2.12
NPM1-212ENST00000524204 TTTY10Q9BZA0 68 aa1.79□□□□□ -2.12
NPM1-212ENST00000524204 NDUFA4O00483 81 aa1.78□□□□□ -2.12
NPM1-212ENST00000524204 SPART-AS1P0CW21 52 aa1.78□□□□□ -2.12
NPM1-212ENST00000524204 Q5BKY6 102 aa1.78□□□□□ -2.12
NPM1-212ENST00000524204 SSBP3-AS1Q7Z2R9 100 aa1.78□□□□□ -2.12
NPM1-212ENST00000524204 APELAP0DMC3 54 aa1.77□□□□□ -2.13
NPM1-212ENST00000524204 SNRPGP62308 76 aaKnown RBP1.77□□□□□ -2.13
NPM1-212ENST00000524204 TMEM167AQ8TBQ9 72 aa1.77□□□□□ -2.13
NPM1-212ENST00000524204 RHPN1-AS1Q9BWJ2 59 aa1.77□□□□□ -2.13
NPM1-212ENST00000524204 A8MTW9 85 aa1.76□□□□□ -2.13
NPM1-212ENST00000524204 K7EIM0 57 aa1.76□□□□□ -2.13
NPM1-212ENST00000524204 NDUFB1O75438 58 aa1.76□□□□□ -2.13
NPM1-212ENST00000524204 DEFB131AP59861 70 aa1.76□□□□□ -2.13
NPM1-212ENST00000524204 ABRACLQ9P1F3 81 aa1.76□□□□□ -2.13
NPM1-212ENST00000524204 TRBV7-4A0A0J9YYF1 115 aa1.75□□□□□ -2.13
NPM1-212ENST00000524204 H3BNG1 76 aa1.75□□□□□ -2.13
NPM1-212ENST00000524204 IFI27P40305 119 aaPredicted RBP1.75□□□□□ -2.13
NPM1-212ENST00000524204 LELP1Q5T871 98 aa1.75□□□□□ -2.13
NPM1-212ENST00000524204 I3L2K1 104 aa1.74□□□□□ -2.13
NPM1-212ENST00000524204 WT1-ASQ06250 92 aa1.74□□□□□ -2.13
NPM1-212ENST00000524204 LPAP08519 4548 aa1.73□□□□□ -2.13
NPM1-212ENST00000524204 A0A096LPF7 62 aa1.71□□□□□ -2.14
NPM1-212ENST00000524204 HTN3P15516 51 aa1.71□□□□□ -2.14
NPM1-212ENST00000524204 ARHGAP5-AS1Q96IT6 56 aa1.71□□□□□ -2.14
NPM1-212ENST00000524204 TRAV21A0A0B4J279 112 aa1.7□□□□□ -2.14
NPM1-212ENST00000524204 S100ZQ8WXG8 99 aa1.7□□□□□ -2.14
NPM1-212ENST00000524204 H3BVH4 76 aa1.69□□□□□ -2.14
NPM1-212ENST00000524204 DEFB130BP0DP73 79 aa1.69□□□□□ -2.14
NPM1-212ENST00000524204 DEFB130AP0DP74 79 aa1.69□□□□□ -2.14
NPM1-212ENST00000524204 DEFB1P60022 68 aa1.69□□□□□ -2.14
NPM1-212ENST00000524204 LINC00959A0A1B0GUT2 108 aa1.68□□□□□ -2.14
NPM1-212ENST00000524204 PRCDQ00LT1 54 aa1.68□□□□□ -2.14
NPM1-212ENST00000524204 C10orf95Q9H7T3 257 aa1.68□□□□□ -2.14
NPM1-212ENST00000524204 TIMM8BQ9Y5J9 83 aaPredicted RBP1.68□□□□□ -2.14
NPM1-212ENST00000524204 TP53AIP1Q9HCN2 124 aa1.67□□□□□ -2.14
NPM1-212ENST00000524204 A0A087WWC5 75 aa1.66□□□□□ -2.14
NPM1-212ENST00000524204 COX6A2Q02221 97 aa1.66□□□□□ -2.14
NPM1-212ENST00000524204 LINC01556Q5JQF7 62 aa1.66□□□□□ -2.14
NPM1-212ENST00000524204 CNFNQ9BYD5 112 aa1.66□□□□□ -2.14
NPM1-212ENST00000524204 NOP10Q9NPE3 64 aaKnown RBP1.66□□□□□ -2.14
NPM1-212ENST00000524204 MUC17Q685J3 4493 aa1.66□□□□□ -2.14
NPM1-212ENST00000524204 SPINK4O60575 86 aa1.65□□□□□ -2.15
NPM1-212ENST00000524204 COX8AP10176 69 aa1.65□□□□□ -2.15
NPM1-212ENST00000524204 WFDC10BQ8IUB3 73 aa1.65□□□□□ -2.15
NPM1-212ENST00000524204 PRO0255Q9UI72 69 aa1.65□□□□□ -2.15
NPM1-212ENST00000524204 FSIP2Q5CZC0 6907 aa1.64□□□□□ -2.15
NPM1-212ENST00000524204 A0A0D9SG42 100 aa1.64□□□□□ -2.15
NPM1-212ENST00000524204 COX7BP24311 80 aa1.64□□□□□ -2.15
NPM1-212ENST00000524204 GNG13Q9P2W3 67 aa1.64□□□□□ -2.15
NPM1-212ENST00000524204 NREPQ16612 68 aa1.63□□□□□ -2.15
NPM1-212ENST00000524204 SNRPGP15A8MWD9 76 aa1.62□□□□□ -2.15
NPM1-212ENST00000524204 ATXN8Q156A1 80 aa1.61□□□□□ -2.15
NPM1-212ENST00000524204 FXYD6Q9H0Q3 95 aa1.61□□□□□ -2.15
NPM1-212ENST00000524204 HTN1P15515 57 aa1.6□□□□□ -2.15
NPM1-212ENST00000524204 SPINK6Q6UWN8 80 aa1.6□□□□□ -2.15
NPM1-212ENST00000524204 TOMM5Q8N4H5 51 aa1.59□□□□□ -2.15
NPM1-212ENST00000524204 CRIPTQ9P021 101 aa1.59□□□□□ -2.15
NPM1-212ENST00000524204 FXYD6-FXYD2A0A087WZ82 144 aa1.58□□□□□ -2.16
NPM1-212ENST00000524204 SFTA3P0C7M3 94 aa1.58□□□□□ -2.16
NPM1-212ENST00000524204 KRTAP19-2Q3LHN2 52 aa1.57□□□□□ -2.16
NPM1-212ENST00000524204 ENHOQ6UWT2 76 aa1.57□□□□□ -2.16
NPM1-212ENST00000524204 Q8IZM0 81 aa1.57□□□□□ -2.16
NPM1-212ENST00000524204 SSPOA2VEC9 5147 aa1.57□□□□□ -2.16
NPM1-212ENST00000524204 I3L3M4 83 aa1.56□□□□□ -2.16
NPM1-212ENST00000524204 USH2AO75445 5202 aa1.55□□□□□ -2.16
NPM1-212ENST00000524204 K7EQZ3 153 aa1.53□□□□□ -2.16
NPM1-212ENST00000524204 C3orf79P0CE67 100 aa1.53□□□□□ -2.16
NPM1-212ENST00000524204 MT1HP80294 61 aa1.52□□□□□ -2.17
NPM1-212ENST00000524204 NMES1Q9C002 83 aa1.52□□□□□ -2.17
NPM1-212ENST00000524204 A0A096LNI7 61 aa1.51□□□□□ -2.17
NPM1-212ENST00000524204 IAPPP10997 89 aa1.51□□□□□ -2.17
NPM1-212ENST00000524204 FLGP20930 4061 aaPredicted RBP1.48□□□□□ -2.17
NPM1-212ENST00000524204 UBL5Q9BZL1 73 aa1.48□□□□□ -2.17
NPM1-212ENST00000524204 CRIP1P50238 77 aa1.47□□□□□ -2.17
NPM1-212ENST00000524204 MRPL34Q9BQ48 92 aaKnown RBP1.47□□□□□ -2.17
NPM1-212ENST00000524204 M0QY20 66 aa1.45□□□□□ -2.18
NPM1-212ENST00000524204 SERF2P84101 59 aa1.45□□□□□ -2.18
NPM1-212ENST00000524204 CLPSL2Q6UWE3 100 aa1.45□□□□□ -2.18
NPM1-212ENST00000524204 LINC01549A6NIU2 74 aa1.44□□□□□ -2.18
NPM1-212ENST00000524204 MACF1Q9UPN3 7388 aaKnown RBP1.43□□□□□ -2.18
NPM1-212ENST00000524204 SYNE2Q8WXH0 6885 aaKnown RBP1.43□□□□□ -2.18
NPM1-212ENST00000524204 KRTAP19-6Q3LI70 58 aa1.42□□□□□ -2.18
NPM1-212ENST00000524204 NEBP20929 6669 aa1.42□□□□□ -2.18
NPM1-212ENST00000524204 MUC12Q9UKN1 5478 aa1.41□□□□□ -2.18
NPM1-212ENST00000524204 COX6B2Q6YFQ2 88 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms