RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 C9orf153Q5TBE3 101 aa3.42□□□□□ -1.86
SDCBP-210ENST00000522843 SS18L2Q9UHA2 77 aa3.42□□□□□ -1.86
SDCBP-210ENST00000522843 J3KT08 172 aa3.41□□□□□ -1.86
SDCBP-210ENST00000522843 Q96NJ1 140 aa3.41□□□□□ -1.86
SDCBP-210ENST00000522843 BPY2O14599 106 aa3.4□□□□□ -1.87
SDCBP-210ENST00000522843 RPL37P61927 97 aaKnown RBP3.4□□□□□ -1.87
SDCBP-210ENST00000522843 HIST1H4AP62805 103 aaKnown RBP3.39□□□□□ -1.87
SDCBP-210ENST00000522843 IGKV3D-7A0A0C4DH55 119 aa3.38□□□□□ -1.87
SDCBP-210ENST00000522843 A8MWP4 228 aa3.37□□□□□ -1.87
SDCBP-210ENST00000522843 IGKV4-1P06312 121 aa3.37□□□□□ -1.87
SDCBP-210ENST00000522843 PRR15Q8IV56 129 aa3.37□□□□□ -1.87
SDCBP-210ENST00000522843 LIMD2Q9BT23 127 aa3.37□□□□□ -1.87
SDCBP-210ENST00000522843 KMT2DO14686 5537 aa3.37□□□□□ -1.87
SDCBP-210ENST00000522843 C1orf195Q5TG92 126 aa3.36□□□□□ -1.87
SDCBP-210ENST00000522843 MDN1Q9NU22 5596 aa3.36□□□□□ -1.87
SDCBP-210ENST00000522843 NDUFB1O75438 58 aa3.35□□□□□ -1.87
SDCBP-210ENST00000522843 LCE1CQ5T751 118 aa3.35□□□□□ -1.87
SDCBP-210ENST00000522843 LCE1BQ5T7P3 118 aa3.35□□□□□ -1.87
SDCBP-210ENST00000522843 HRCT1Q6UXD1 115 aa3.35□□□□□ -1.87
SDCBP-210ENST00000522843 A0A1B0GVX0 72 aa3.33□□□□□ -1.88
SDCBP-210ENST00000522843 K7EQZ3 153 aa3.33□□□□□ -1.88
SDCBP-210ENST00000522843 KRTAP10-10P60014 251 aa3.33□□□□□ -1.88
SDCBP-210ENST00000522843 DEFB116Q30KQ4 102 aa3.33□□□□□ -1.88
SDCBP-210ENST00000522843 SMIM20Q8N5G0 67 aa3.33□□□□□ -1.88
SDCBP-210ENST00000522843 A0A087WVE0 104 aa3.32□□□□□ -1.88
SDCBP-210ENST00000522843 C8orf87E5RJ46 101 aa3.32□□□□□ -1.88
SDCBP-210ENST00000522843 ATOX1O00244 68 aa3.32□□□□□ -1.88
SDCBP-210ENST00000522843 CAMK2N1Q7Z7J9 78 aa3.32□□□□□ -1.88
SDCBP-210ENST00000522843 FAM236AA0A1B0GUQ0 79 aa3.31□□□□□ -1.88
SDCBP-210ENST00000522843 FAM236BA0A1B0GV22 79 aa3.31□□□□□ -1.88
SDCBP-210ENST00000522843 HCG22E2RYF7 251 aa3.31□□□□□ -1.88
SDCBP-210ENST00000522843 Q8N9L7 120 aa3.31□□□□□ -1.88
SDCBP-210ENST00000522843 MMP24-AS1A0A0U1RRL7 71 aa3.3□□□□□ -1.88
SDCBP-210ENST00000522843 C8orf17Q9NRJ1 99 aa3.3□□□□□ -1.88
SDCBP-210ENST00000522843 TRAV7A0A075B6U4 112 aa3.29□□□□□ -1.88
SDCBP-210ENST00000522843 A8MU10 97 aa3.29□□□□□ -1.88
SDCBP-210ENST00000522843 SERP2Q8N6R1 65 aa3.29□□□□□ -1.88
SDCBP-210ENST00000522843 TMEM254Q8TBM7 123 aa3.29□□□□□ -1.88
SDCBP-210ENST00000522843 hDV103S1A0JD37 113 aa3.28□□□□□ -1.88
SDCBP-210ENST00000522843 LINC00313P59037 77 aa3.28□□□□□ -1.88
SDCBP-210ENST00000522843 CASC2Q6XLA1 102 aa3.28□□□□□ -1.88
SDCBP-210ENST00000522843 TP53AIP1Q9HCN2 124 aa3.28□□□□□ -1.88
SDCBP-210ENST00000522843 IGHV6-1A0A0B4J1U7 121 aa3.27□□□□□ -1.89
SDCBP-210ENST00000522843 COX7CP15954 63 aa3.27□□□□□ -1.89
SDCBP-210ENST00000522843 MRPL34Q9BQ48 92 aaKnown RBP3.27□□□□□ -1.89
SDCBP-210ENST00000522843 ANAPC13Q9BS18 74 aa3.27□□□□□ -1.89
SDCBP-210ENST00000522843 UQCRQO14949 82 aa3.26□□□□□ -1.89
SDCBP-210ENST00000522843 C5orf47Q569G3 176 aa3.26□□□□□ -1.89
SDCBP-210ENST00000522843 GPR98Q8WXG9 6306 aa3.25□□□□□ -1.89
SDCBP-210ENST00000522843 H3BPC8 53 aa3.24□□□□□ -1.89
SDCBP-210ENST00000522843 WFDC13Q8IUB5 93 aa3.24□□□□□ -1.89
SDCBP-210ENST00000522843 A8MUU9 505 aa3.23□□□□□ -1.89
SDCBP-210ENST00000522843 KRTAP2-3P0C7H8 128 aa3.23□□□□□ -1.89
SDCBP-210ENST00000522843 KLKP1Q107X0 134 aa3.23□□□□□ -1.89
SDCBP-210ENST00000522843 C20orf166-AS1Q96NR2 134 aa3.23□□□□□ -1.89
SDCBP-210ENST00000522843 KRTAP2-4Q9BYR9 128 aa3.23□□□□□ -1.89
SDCBP-210ENST00000522843 KRTAP5-8O75690 187 aa3.22□□□□□ -1.89
SDCBP-210ENST00000522843 ATP11AUNQ6ZP68 121 aa3.22□□□□□ -1.89
SDCBP-210ENST00000522843 ZCCHC13Q8WW36 166 aaKnown RBP3.21□□□□□ -1.9
SDCBP-210ENST00000522843 CCDC179H3BU77 68 aa3.2□□□□□ -1.9
SDCBP-210ENST00000522843 NDUFC1O43677 76 aa3.19□□□□□ -1.9
SDCBP-210ENST00000522843 MP68P56378 58 aa3.19□□□□□ -1.9
SDCBP-210ENST00000522843 Q5W150 140 aa3.19□□□□□ -1.9
SDCBP-210ENST00000522843 TRAV22A0A0B4J277 110 aa3.18□□□□□ -1.9
SDCBP-210ENST00000522843 H0Y9P7 68 aa3.17□□□□□ -1.9
SDCBP-210ENST00000522843 C20orf197Q8N268 126 aa3.17□□□□□ -1.9
SDCBP-210ENST00000522843 H7BZZ5 65 aa3.16□□□□□ -1.9
SDCBP-210ENST00000522843 NDUFS5O43920 106 aa3.16□□□□□ -1.9
SDCBP-210ENST00000522843 C1orf64Q8NEQ6 169 aa3.16□□□□□ -1.9
SDCBP-210ENST00000522843 LOC101927531A0A1B0GV80 90 aa3.15□□□□□ -1.91
SDCBP-210ENST00000522843 HRES1P13985 223 aa3.15□□□□□ -1.91
SDCBP-210ENST00000522843 LINC00208Q96KT6 92 aa3.15□□□□□ -1.91
SDCBP-210ENST00000522843 CYP4F30PQ9H0H9 118 aa3.15□□□□□ -1.91
SDCBP-210ENST00000522843 FAM236DA0A1B0GTK5 79 aa3.14□□□□□ -1.91
SDCBP-210ENST00000522843 FAM236CP0DP71 79 aa3.14□□□□□ -1.91
SDCBP-210ENST00000522843 SPANXA2-OT1Q8N9U9 137 aa3.14□□□□□ -1.91
SDCBP-210ENST00000522843 CYSTM1Q9H1C7 97 aa3.14□□□□□ -1.91
SDCBP-210ENST00000522843 SNURFQ9Y675 71 aa3.14□□□□□ -1.91
SDCBP-210ENST00000522843 TMEM258P61165 79 aa3.12□□□□□ -1.91
SDCBP-210ENST00000522843 ATP5EP56381 51 aaPredicted RBP3.1□□□□□ -1.91
SDCBP-210ENST00000522843 KRTAP2-1Q9BYU5 128 aa3.1□□□□□ -1.91
SDCBP-210ENST00000522843 V9GYY9 64 aa3.1□□□□□ -1.91
SDCBP-210ENST00000522843 A6NN06 94 aa3.09□□□□□ -1.91
SDCBP-210ENST00000522843 RPS28P62857 69 aaKnown RBP3.09□□□□□ -1.91
SDCBP-210ENST00000522843 SPINK7P58062 85 aa3.08□□□□□ -1.92
SDCBP-210ENST00000522843 C7orf65Q6ZTY9 151 aa3.08□□□□□ -1.92
SDCBP-210ENST00000522843 RBM12B-AS1Q9P1G2 102 aa3.07□□□□□ -1.92
SDCBP-210ENST00000522843 MT1BP07438 61 aa3.06□□□□□ -1.92
SDCBP-210ENST00000522843 A8MUN3 132 aa3.05□□□□□ -1.92
SDCBP-210ENST00000522843 PSPHP1O15172 72 aa3.05□□□□□ -1.92
SDCBP-210ENST00000522843 SPRR2EP22531 72 aa3.04□□□□□ -1.92
SDCBP-210ENST00000522843 SPRR2BP35325 72 aa3.04□□□□□ -1.92
SDCBP-210ENST00000522843 SPRR2AP35326 72 aa3.04□□□□□ -1.92
SDCBP-210ENST00000522843 DMAC1Q96GE9 116 aa3.04□□□□□ -1.92
SDCBP-210ENST00000522843 SERP1Q9Y6X1 66 aa3.03□□□□□ -1.92
SDCBP-210ENST00000522843 ACYP2P14621 99 aa3.02□□□□□ -1.93
SDCBP-210ENST00000522843 C4orf26Q17RF5 130 aa2.99□□□□□ -1.93
SDCBP-210ENST00000522843 SPRR2FQ96RM1 72 aa2.99□□□□□ -1.93
SDCBP-210ENST00000522843 SMIM26A0A096LP01 95 aa2.97□□□□□ -1.93
SDCBP-210ENST00000522843 COA5Q86WW8 74 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 213.5 ms