RNA–Protein interactions for RNA: ENST00000522275.5

PCM1-215, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-215ENST00000522275 FBN3Q75N90 2809 aa2.29□□□□□ -2.04
PCM1-215ENST00000522275 DNAH8Q96JB1 4490 aa2.29□□□□□ -2.04
PCM1-215ENST00000522275 MYO18BQ8IUG5 2567 aa2.29□□□□□ -2.04
PCM1-215ENST00000522275 NSD1Q96L73 2696 aaPredicted RBP2.29□□□□□ -2.04
PCM1-215ENST00000522275 INE1O15225 51 aa2.29□□□□□ -2.04
PCM1-215ENST00000522275 USP24Q9UPU5 2620 aa2.29□□□□□ -2.04
PCM1-215ENST00000522275 TENM3Q9P273 2699 aa2.28□□□□□ -2.04
PCM1-215ENST00000522275 KMT2AQ03164 3969 aa2.28□□□□□ -2.04
PCM1-215ENST00000522275 TEP1Q99973 2627 aaKnown RBP2.28□□□□□ -2.04
PCM1-215ENST00000522275 TENM1Q9UKZ4 2725 aa2.27□□□□□ -2.05
PCM1-215ENST00000522275 FLNCQ14315 2725 aa2.27□□□□□ -2.05
PCM1-215ENST00000522275 FLNAP21333 2647 aaKnown RBP2.26□□□□□ -2.05
PCM1-215ENST00000522275 KRTAP1-5Q9BYS1 174 aa2.25□□□□□ -2.05
PCM1-215ENST00000522275 KRTAP10-3P60369 221 aa2.25□□□□□ -2.05
PCM1-215ENST00000522275 DNAH9Q9NYC9 4486 aa2.24□□□□□ -2.05
PCM1-215ENST00000522275 DNAH11Q96DT5 4516 aa2.22□□□□□ -2.05
PCM1-215ENST00000522275 FLNBO75369 2602 aaKnown RBP2.21□□□□□ -2.06
PCM1-215ENST00000522275 SPRR5A0A1B0GTR4 108 aa2.21□□□□□ -2.06
PCM1-215ENST00000522275 KRTAP13-2Q52LG2 175 aa2.21□□□□□ -2.06
PCM1-215ENST00000522275 DNAH7Q8WXX0 4024 aa2.2□□□□□ -2.06
PCM1-215ENST00000522275 HUWE1Q7Z6Z7 4374 aaKnown RBP2.19□□□□□ -2.06
PCM1-215ENST00000522275 PP632Q6XCG6 107 aa2.19□□□□□ -2.06
PCM1-215ENST00000522275 MGAM2Q2M2H8 2515 aa2.18□□□□□ -2.06
PCM1-215ENST00000522275 CMYA5Q8N3K9 4069 aa2.18□□□□□ -2.06
PCM1-215ENST00000522275 IGSF10Q6WRI0 2623 aa2.18□□□□□ -2.06
PCM1-215ENST00000522275 MAST4O15021 2626 aa2.17□□□□□ -2.06
PCM1-215ENST00000522275 M0QZ58 72 aa2.17□□□□□ -2.06
PCM1-215ENST00000522275 STAB1Q9NY15 2570 aa2.16□□□□□ -2.06
PCM1-215ENST00000522275 MYCBP2O75592 4640 aa2.15□□□□□ -2.06
PCM1-215ENST00000522275 C9orf92A6NGG3 77 aa2.15□□□□□ -2.07
PCM1-215ENST00000522275 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.07
PCM1-215ENST00000522275 HECTD4Q9Y4D8 3996 aa2.14□□□□□ -2.07
PCM1-215ENST00000522275 KRTAP10-9P60411 292 aa2.14□□□□□ -2.07
PCM1-215ENST00000522275 DNAH2Q9P225 4427 aa2.13□□□□□ -2.07
PCM1-215ENST00000522275 KRTAP10-11P60412 298 aa2.12□□□□□ -2.07
PCM1-215ENST00000522275 DNAH6Q9C0G6 4158 aa2.09□□□□□ -2.07
PCM1-215ENST00000522275 KRTAP1-4P0C5Y4 121 aa2.09□□□□□ -2.08
PCM1-215ENST00000522275 DNAH3Q8TD57 4116 aa2.09□□□□□ -2.08
PCM1-215ENST00000522275 DYNC2H1Q8NCM8 4307 aaKnown RBP2.08□□□□□ -2.08
PCM1-215ENST00000522275 APOBP04114 4563 aaKnown RBP2.06□□□□□ -2.08
PCM1-215ENST00000522275 RPS29P62273 56 aaKnown RBP2.04□□□□□ -2.08
PCM1-215ENST00000522275 Q5VSD8 79 aa2.03□□□□□ -2.08
PCM1-215ENST00000522275 PRKDCP78527 4128 aaKnown RBP2.02□□□□□ -2.09
PCM1-215ENST00000522275 PKHD1P08F94 4074 aa2.02□□□□□ -2.09
PCM1-215ENST00000522275 A0A1B0GVY2 172 aa2.02□□□□□ -2.09
PCM1-215ENST00000522275 SMR3AQ99954 134 aa2.01□□□□□ -2.09
PCM1-215ENST00000522275 LRP1BQ9NZR2 4599 aa1.99□□□□□ -2.09
PCM1-215ENST00000522275 PLECQ15149 4684 aaKnown RBP1.98□□□□□ -2.09
PCM1-215ENST00000522275 VPS13BQ7Z7G8 4022 aa1.97□□□□□ -2.09
PCM1-215ENST00000522275 TNP1P09430 55 aa1.96□□□□□ -2.1
PCM1-215ENST00000522275 KRTAP5-9P26371 169 aa1.96□□□□□ -2.1
PCM1-215ENST00000522275 KRTAP10-10P60014 251 aa1.93□□□□□ -2.1
PCM1-215ENST00000522275 LRP1Q07954 4544 aaKnown RBP1.93□□□□□ -2.1
PCM1-215ENST00000522275 FAT2Q9NYQ8 4349 aa1.92□□□□□ -2.1
PCM1-215ENST00000522275 PKD1P98161 4303 aa1.91□□□□□ -2.1
PCM1-215ENST00000522275 DNAH5Q8TE73 4624 aa1.91□□□□□ -2.1
PCM1-215ENST00000522275 HSPG2P98160 4391 aa1.91□□□□□ -2.1
PCM1-215ENST00000522275 STARD9Q9P2P6 4700 aa1.88□□□□□ -2.11
PCM1-215ENST00000522275 KRTAP10-1P60331 282 aa1.88□□□□□ -2.11
PCM1-215ENST00000522275 PKHD1L1Q86WI1 4243 aa1.88□□□□□ -2.11
PCM1-215ENST00000522275 FAT1Q14517 4588 aa1.86□□□□□ -2.11
PCM1-215ENST00000522275 SACSQ9NZJ4 4579 aa1.86□□□□□ -2.11
PCM1-215ENST00000522275 LCE1AQ5T7P2 110 aa1.84□□□□□ -2.11
PCM1-215ENST00000522275 LPAP08519 4548 aa1.84□□□□□ -2.12
PCM1-215ENST00000522275 KRTAP21-3Q3LHN1 58 aa1.83□□□□□ -2.12
PCM1-215ENST00000522275 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
PCM1-215ENST00000522275 FAT3Q8TDW7 4589 aa1.83□□□□□ -2.12
PCM1-215ENST00000522275 TNXBP22105 4242 aa1.82□□□□□ -2.12
PCM1-215ENST00000522275 KRTAP5-4Q6L8H1 288 aa1.82□□□□□ -2.12
PCM1-215ENST00000522275 GPR98Q8WXG9 6306 aa1.81□□□□□ -2.12
PCM1-215ENST00000522275 DYNC1H1Q14204 4646 aaKnown RBP1.81□□□□□ -2.12
PCM1-215ENST00000522275 LCE3AQ5TA76 89 aa1.8□□□□□ -2.12
PCM1-215ENST00000522275 KRTAP10-7P60409 375 aaPredicted RBP1.8□□□□□ -2.12
PCM1-215ENST00000522275 KRTAP10-12P60413 245 aa1.8□□□□□ -2.12
PCM1-215ENST00000522275 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.12
PCM1-215ENST00000522275 KIAA1109Q2LD37 5005 aa1.77□□□□□ -2.13
PCM1-215ENST00000522275 SMR3BP02814 79 aaPredicted RBP1.77□□□□□ -2.13
PCM1-215ENST00000522275 KRTAP2-2Q9BYT5 123 aa1.76□□□□□ -2.13
PCM1-215ENST00000522275 UBR4Q5T4S7 5183 aa1.75□□□□□ -2.13
PCM1-215ENST00000522275 KRTAP8-1Q8IUC2 63 aa1.74□□□□□ -2.13
PCM1-215ENST00000522275 KRTAP5-1Q6L8H4 278 aa1.74□□□□□ -2.13
PCM1-215ENST00000522275 FLGP20930 4061 aaPredicted RBP1.73□□□□□ -2.13
PCM1-215ENST00000522275 PCLOQ9Y6V0 5065 aa1.73□□□□□ -2.13
PCM1-215ENST00000522275 LRP2P98164 4655 aa1.71□□□□□ -2.14
PCM1-215ENST00000522275 KRTAP4-4Q9BYR3 166 aa1.71□□□□□ -2.14
PCM1-215ENST00000522275 KRTAP10-4P60372 401 aaPredicted RBP1.7□□□□□ -2.14
PCM1-215ENST00000522275 KRTAP2-3P0C7H8 128 aa1.7□□□□□ -2.14
PCM1-215ENST00000522275 KRTAP12-3P60328 96 aa1.7□□□□□ -2.14
PCM1-215ENST00000522275 KRTAP2-4Q9BYR9 128 aa1.7□□□□□ -2.14
PCM1-215ENST00000522275 KRTAP2-1Q9BYU5 128 aa1.7□□□□□ -2.14
PCM1-215ENST00000522275 KRTAP10-5P60370 271 aa1.67□□□□□ -2.14
PCM1-215ENST00000522275 KRTAP6-3Q3LI67 103 aa1.67□□□□□ -2.14
PCM1-215ENST00000522275 LCE1EQ5T753 118 aa1.67□□□□□ -2.14
PCM1-215ENST00000522275 MT3P25713 68 aa1.66□□□□□ -2.14
PCM1-215ENST00000522275 HYDINQ4G0P3 5121 aa1.65□□□□□ -2.14
PCM1-215ENST00000522275 MUC17Q685J3 4493 aa1.64□□□□□ -2.15
PCM1-215ENST00000522275 KMT2CQ8NEZ4 4911 aaKnown RBP1.64□□□□□ -2.15
PCM1-215ENST00000522275 LCE1FQ5T754 118 aa1.63□□□□□ -2.15
PCM1-215ENST00000522275 M0R2T5 61 aa1.63□□□□□ -2.15
PCM1-215ENST00000522275 KRTAP12-4P60329 112 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms