RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 PKHD1P08F94 4074 aa5.17□□□□□ -1.58
CTNNA1-230ENST00000521724 DMBT1Q9UGM3 2413 aaPredicted RBP5.12□□□□□ -1.59
CTNNA1-230ENST00000521724 RPL37P61927 97 aaKnown RBP5.11□□□□□ -1.59
CTNNA1-230ENST00000521724 C9orf92A6NGG3 77 aa5.11□□□□□ -1.59
CTNNA1-230ENST00000521724 TPRXLQ17RH7 258 aa5.1□□□□□ -1.59
CTNNA1-230ENST00000521724 KRTAP21-3Q3LHN1 58 aa5.09□□□□□ -1.6
CTNNA1-230ENST00000521724 NDUFAF8A1L188 74 aa5.08□□□□□ -1.6
CTNNA1-230ENST00000521724 C20orf166-AS1Q96NR2 134 aa5.08□□□□□ -1.6
CTNNA1-230ENST00000521724 A0A0D9SG42 100 aa5.07□□□□□ -1.6
CTNNA1-230ENST00000521724 FAT1Q14517 4588 aa5.06□□□□□ -1.6
CTNNA1-230ENST00000521724 SACSQ9NZJ4 4579 aa5.06□□□□□ -1.6
CTNNA1-230ENST00000521724 C10orf95Q9H7T3 257 aa5.05□□□□□ -1.6
CTNNA1-230ENST00000521724 SMR3BP02814 79 aaPredicted RBP5.04□□□□□ -1.6
CTNNA1-230ENST00000521724 RPS29P62273 56 aaKnown RBP5.04□□□□□ -1.6
CTNNA1-230ENST00000521724 KRTAP15-1Q3LI76 137 aa5.03□□□□□ -1.6
CTNNA1-230ENST00000521724 KRTAP13-4Q3LI77 160 aa5.02□□□□□ -1.61
CTNNA1-230ENST00000521724 DYNC1H1Q14204 4646 aaKnown RBP5.02□□□□□ -1.61
CTNNA1-230ENST00000521724 KRTAP10-6P60371 365 aaPredicted RBP5.01□□□□□ -1.61
CTNNA1-230ENST00000521724 PKHD1L1Q86WI1 4243 aa4.98□□□□□ -1.61
CTNNA1-230ENST00000521724 KMT2CQ8NEZ4 4911 aaKnown RBP4.97□□□□□ -1.61
CTNNA1-230ENST00000521724 APOBP04114 4563 aaKnown RBP4.94□□□□□ -1.62
CTNNA1-230ENST00000521724 S4R3F8 94 aa4.93□□□□□ -1.62
CTNNA1-230ENST00000521724 RYR2Q92736 4967 aa4.91□□□□□ -1.62
CTNNA1-230ENST00000521724 KRTAP12-2P59991 146 aa4.9□□□□□ -1.63
CTNNA1-230ENST00000521724 KRTAP10-4P60372 401 aaPredicted RBP4.89□□□□□ -1.63
CTNNA1-230ENST00000521724 LRP1Q07954 4544 aaKnown RBP4.88□□□□□ -1.63
CTNNA1-230ENST00000521724 A0A1B0GVY2 172 aa4.85□□□□□ -1.63
CTNNA1-230ENST00000521724 HSPG2P98160 4391 aa4.85□□□□□ -1.63
CTNNA1-230ENST00000521724 MYCBP2O75592 4640 aa4.84□□□□□ -1.64
CTNNA1-230ENST00000521724 KRTAP12-1P59990 96 aa4.83□□□□□ -1.64
CTNNA1-230ENST00000521724 XP32Q5T750 250 aa4.82□□□□□ -1.64
CTNNA1-230ENST00000521724 FAT3Q8TDW7 4589 aa4.82□□□□□ -1.64
CTNNA1-230ENST00000521724 TNXBP22105 4242 aa4.81□□□□□ -1.64
CTNNA1-230ENST00000521724 RYR3Q15413 4870 aa4.81□□□□□ -1.64
CTNNA1-230ENST00000521724 KRTAP10-8P60410 259 aa4.78□□□□□ -1.64
CTNNA1-230ENST00000521724 KRTAP17-1Q9BYP8 105 aa4.74□□□□□ -1.65
CTNNA1-230ENST00000521724 KIAA1109Q2LD37 5005 aa4.72□□□□□ -1.65
CTNNA1-230ENST00000521724 M0QZ58 72 aa4.72□□□□□ -1.65
CTNNA1-230ENST00000521724 LPAP08519 4548 aa4.7□□□□□ -1.66
CTNNA1-230ENST00000521724 PLAC4Q8WY50 150 aa4.69□□□□□ -1.66
CTNNA1-230ENST00000521724 RYR1P21817 5038 aa4.68□□□□□ -1.66
CTNNA1-230ENST00000521724 Q5VSD8 79 aa4.68□□□□□ -1.66
CTNNA1-230ENST00000521724 EPPK1P58107 5090 aaKnown RBP4.65□□□□□ -1.67
CTNNA1-230ENST00000521724 LRP2P98164 4655 aa4.61□□□□□ -1.67
CTNNA1-230ENST00000521724 ABCA13Q86UQ4 5058 aa4.58□□□□□ -1.68
CTNNA1-230ENST00000521724 R4GN34 69 aa4.58□□□□□ -1.68
CTNNA1-230ENST00000521724 MT1HL1P0DM35 61 aa4.55□□□□□ -1.68
CTNNA1-230ENST00000521724 KRTAP4-5Q9BYR2 181 aa4.5□□□□□ -1.69
CTNNA1-230ENST00000521724 PP632Q6XCG6 107 aa4.46□□□□□ -1.69
CTNNA1-230ENST00000521724 PRO2289Q9P1D8 64 aa4.4□□□□□ -1.71
CTNNA1-230ENST00000521724 MUC17Q685J3 4493 aa4.36□□□□□ -1.71
CTNNA1-230ENST00000521724 MUC2Q02817 5179 aa4.35□□□□□ -1.71
CTNNA1-230ENST00000521724 HERC2O95714 4834 aa4.33□□□□□ -1.72
CTNNA1-230ENST00000521724 KRTAP4-1Q9BYQ7 146 aa4.32□□□□□ -1.72
CTNNA1-230ENST00000521724 SPRR5A0A1B0GTR4 108 aa4.25□□□□□ -1.73
CTNNA1-230ENST00000521724 TNP1P09430 55 aa4.24□□□□□ -1.73
CTNNA1-230ENST00000521724 KRTAP19-4Q3LI73 84 aa4.24□□□□□ -1.73
CTNNA1-230ENST00000521724 BIRC6Q9NR09 4857 aa4.23□□□□□ -1.73
CTNNA1-230ENST00000521724 HERC1Q15751 4861 aa4.22□□□□□ -1.73
CTNNA1-230ENST00000521724 KRTAP19-2Q3LHN2 52 aa4.22□□□□□ -1.73
CTNNA1-230ENST00000521724 PCLOQ9Y6V0 5065 aa4.19□□□□□ -1.74
CTNNA1-230ENST00000521724 LCE5AQ5TCM9 118 aa4.17□□□□□ -1.74
CTNNA1-230ENST00000521724 FLGP20930 4061 aaPredicted RBP4.12□□□□□ -1.75
CTNNA1-230ENST00000521724 FAT4Q6V0I7 4981 aa4.12□□□□□ -1.75
CTNNA1-230ENST00000521724 KRTAP9-4Q9BYQ2 154 aa4.09□□□□□ -1.75
CTNNA1-230ENST00000521724 RNF213Q63HN8 5207 aa4.08□□□□□ -1.76
CTNNA1-230ENST00000521724 HMCN2Q8NDA2 5059 aa4.06□□□□□ -1.76
CTNNA1-230ENST00000521724 INE1O15225 51 aa4.03□□□□□ -1.76
CTNNA1-230ENST00000521724 UBR4Q5T4S7 5183 aa4.02□□□□□ -1.77
CTNNA1-230ENST00000521724 LCE3AQ5TA76 89 aa3.96□□□□□ -1.78
CTNNA1-230ENST00000521724 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
CTNNA1-230ENST00000521724 KRTAP9-6A0A140TA67 174 aa3.88□□□□□ -1.79
CTNNA1-230ENST00000521724 KRTAP9-7A8MTY7 169 aa3.88□□□□□ -1.79
CTNNA1-230ENST00000521724 KRTAP19-1Q8IUB9 90 aa3.87□□□□□ -1.79
CTNNA1-230ENST00000521724 SPRR2GQ9BYE4 73 aa3.86□□□□□ -1.79
CTNNA1-230ENST00000521724 M0R2T5 61 aa3.86□□□□□ -1.79
CTNNA1-230ENST00000521724 LCE4AQ5TA78 99 aa3.86□□□□□ -1.79
CTNNA1-230ENST00000521724 KRTAP8-1Q8IUC2 63 aa3.84□□□□□ -1.8
CTNNA1-230ENST00000521724 MT1HP80294 61 aa3.8□□□□□ -1.8
CTNNA1-230ENST00000521724 MT1FP04733 61 aa3.78□□□□□ -1.8
CTNNA1-230ENST00000521724 KRTAP12-3P60328 96 aa3.76□□□□□ -1.81
CTNNA1-230ENST00000521724 LCE1FQ5T754 118 aa3.76□□□□□ -1.81
CTNNA1-230ENST00000521724 MT2AP02795 61 aa3.75□□□□□ -1.81
CTNNA1-230ENST00000521724 KRTAP2-2Q9BYT5 123 aa3.75□□□□□ -1.81
CTNNA1-230ENST00000521724 KRTAP10-10P60014 251 aa3.74□□□□□ -1.81
CTNNA1-230ENST00000521724 KRTAP9-8Q9BYQ0 159 aa3.73□□□□□ -1.81
CTNNA1-230ENST00000521724 KRTAP10-12P60413 245 aa3.73□□□□□ -1.81
CTNNA1-230ENST00000521724 MT1BP07438 61 aa3.66□□□□□ -1.82
CTNNA1-230ENST00000521724 KRTAP10-5P60370 271 aa3.65□□□□□ -1.82
CTNNA1-230ENST00000521724 MT1XP80297 61 aa3.64□□□□□ -1.83
CTNNA1-230ENST00000521724 KRTAP19-8Q3LI54 63 aa3.64□□□□□ -1.83
CTNNA1-230ENST00000521724 USH2AO75445 5202 aa3.63□□□□□ -1.83
CTNNA1-230ENST00000521724 LCE1AQ5T7P2 110 aa3.61□□□□□ -1.83
CTNNA1-230ENST00000521724 KRTAP10-7P60409 375 aaPredicted RBP3.59□□□□□ -1.83
CTNNA1-230ENST00000521724 KRTAP9-3Q9BYQ3 159 aa3.56□□□□□ -1.84
CTNNA1-230ENST00000521724 LCE3CQ5T5A8 94 aa3.55□□□□□ -1.84
CTNNA1-230ENST00000521724 KMT2DO14686 5537 aa3.54□□□□□ -1.84
CTNNA1-230ENST00000521724 MT3P25713 68 aa3.53□□□□□ -1.84
CTNNA1-230ENST00000521724 KRTAP19-5Q3LI72 72 aa3.49□□□□□ -1.85
CTNNA1-230ENST00000521724 KRTAP9-6A8MVA2 160 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms