RNA–Protein interactions for RNA: ENST00000521693.1

LAMA4-217, Transcript of laminin subunit alpha 4, humanhuman

TSL 2

Gene LAMA4, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-217ENST00000521693 MAP1AP78559 2803 aaPredicted RBP2.13□□□□□ -2.07
LAMA4-217ENST00000521693 CCDC168Q8NDH2 2452 aa2.13□□□□□ -2.07
LAMA4-217ENST00000521693 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
LAMA4-217ENST00000521693 STAB1Q9NY15 2570 aa2.13□□□□□ -2.07
LAMA4-217ENST00000521693 DEFB4AO15263 64 aa2.12□□□□□ -2.07
LAMA4-217ENST00000521693 S4R3F8 94 aa2.12□□□□□ -2.07
LAMA4-217ENST00000521693 BSNQ9UPA5 3926 aa2.12□□□□□ -2.07
LAMA4-217ENST00000521693 NIPBLQ6KC79 2804 aaeCLIP2.12□□□□□ -2.07
LAMA4-217ENST00000521693 APCP25054 2843 aa2.11□□□□□ -2.07
LAMA4-217ENST00000521693 NOTCH1P46531 2555 aa2.11□□□□□ -2.07
LAMA4-217ENST00000521693 ALMS1Q8TCU4 4167 aa2.11□□□□□ -2.07
LAMA4-217ENST00000521693 APLNQ9ULZ1 77 aa2.1□□□□□ -2.07
LAMA4-217ENST00000521693 ACANP16112 2415 aa2.1□□□□□ -2.07
LAMA4-217ENST00000521693 HIVEP2P31629 2446 aa2.09□□□□□ -2.08
LAMA4-217ENST00000521693 CSMD2Q7Z408 3487 aa2.08□□□□□ -2.08
LAMA4-217ENST00000521693 AKAP9Q99996 3911 aa2.08□□□□□ -2.08
LAMA4-217ENST00000521693 COL6A5A8TX70 2615 aa2.08□□□□□ -2.08
LAMA4-217ENST00000521693 FLNAP21333 2647 aaKnown RBP2.07□□□□□ -2.08
LAMA4-217ENST00000521693 PKD1L1Q8TDX9 2849 aa2.07□□□□□ -2.08
LAMA4-217ENST00000521693 A0A096LNI7 61 aa2.07□□□□□ -2.08
LAMA4-217ENST00000521693 KRTAP13-1Q8IUC0 172 aa2.07□□□□□ -2.08
LAMA4-217ENST00000521693 FLG2Q5D862 2391 aaPredicted RBP2.06□□□□□ -2.08
LAMA4-217ENST00000521693 TLN2Q9Y4G6 2542 aa2.06□□□□□ -2.08
LAMA4-217ENST00000521693 SVEP1Q4LDE5 3571 aa2.05□□□□□ -2.08
LAMA4-217ENST00000521693 TGP01266 2768 aa2.04□□□□□ -2.08
LAMA4-217ENST00000521693 NBEAL2Q6ZNJ1 2754 aa2.04□□□□□ -2.08
LAMA4-217ENST00000521693 Q5VSD8 79 aa2.04□□□□□ -2.08
LAMA4-217ENST00000521693 A0A0D9SG42 100 aa2.03□□□□□ -2.08
LAMA4-217ENST00000521693 SPINK6Q6UWN8 80 aa2.03□□□□□ -2.08
LAMA4-217ENST00000521693 M0QZ58 72 aa2.02□□□□□ -2.09
LAMA4-217ENST00000521693 MXRA5Q9NR99 2828 aa2.02□□□□□ -2.09
LAMA4-217ENST00000521693 ZNF469Q96JG9 3925 aaPredicted RBP2.02□□□□□ -2.09
LAMA4-217ENST00000521693 CUBNO60494 3623 aa2.02□□□□□ -2.09
LAMA4-217ENST00000521693 NSD1Q96L73 2696 aaPredicted RBP2.01□□□□□ -2.09
LAMA4-217ENST00000521693 KRTAP12-1P59990 96 aa2□□□□□ -2.09
LAMA4-217ENST00000521693 SMR3AQ99954 134 aa2□□□□□ -2.09
LAMA4-217ENST00000521693 VPS13CQ709C8 3753 aa2□□□□□ -2.09
LAMA4-217ENST00000521693 TENM2Q9NT68 2774 aa2□□□□□ -2.09
LAMA4-217ENST00000521693 MGAM2Q2M2H8 2515 aa1.99□□□□□ -2.09
LAMA4-217ENST00000521693 RYR3Q15413 4870 aa1.98□□□□□ -2.09
LAMA4-217ENST00000521693 BIRC6Q9NR09 4857 aa1.97□□□□□ -2.09
LAMA4-217ENST00000521693 SONP18583 2426 aaKnown RBP1.97□□□□□ -2.09
LAMA4-217ENST00000521693 KMT2CQ8NEZ4 4911 aaKnown RBP1.96□□□□□ -2.1
LAMA4-217ENST00000521693 ZANQ9Y493 2812 aa1.95□□□□□ -2.1
LAMA4-217ENST00000521693 KRTAP13-4Q3LI77 160 aa1.95□□□□□ -2.1
LAMA4-217ENST00000521693 MEGF8Q7Z7M0 2845 aa1.94□□□□□ -2.1
LAMA4-217ENST00000521693 EPPK1P58107 5090 aaKnown RBP1.93□□□□□ -2.1
LAMA4-217ENST00000521693 ANK2Q01484 3957 aa1.91□□□□□ -2.1
LAMA4-217ENST00000521693 PRKDCP78527 4128 aaKnown RBP1.9□□□□□ -2.1
LAMA4-217ENST00000521693 ANK3Q12955 4377 aaKnown RBP1.9□□□□□ -2.1
LAMA4-217ENST00000521693 RPS29P62273 56 aaKnown RBP1.9□□□□□ -2.11
LAMA4-217ENST00000521693 DNAH1Q9P2D7 4330 aa1.89□□□□□ -2.11
LAMA4-217ENST00000521693 PCLOQ9Y6V0 5065 aa1.89□□□□□ -2.11
LAMA4-217ENST00000521693 HYDINQ4G0P3 5121 aa1.89□□□□□ -2.11
LAMA4-217ENST00000521693 RYR1P21817 5038 aa1.88□□□□□ -2.11
LAMA4-217ENST00000521693 SRRM2Q9UQ35 2752 aaKnown RBP1.87□□□□□ -2.11
LAMA4-217ENST00000521693 TENM1Q9UKZ4 2725 aa1.86□□□□□ -2.11
LAMA4-217ENST00000521693 CRCT1Q9UGL9 99 aa1.86□□□□□ -2.11
LAMA4-217ENST00000521693 TRRAPQ9Y4A5 3859 aa1.85□□□□□ -2.11
LAMA4-217ENST00000521693 RYR2Q92736 4967 aa1.85□□□□□ -2.11
LAMA4-217ENST00000521693 VWFP04275 2813 aa1.85□□□□□ -2.11
LAMA4-217ENST00000521693 TENM3Q9P273 2699 aa1.84□□□□□ -2.12
LAMA4-217ENST00000521693 KRTAP6-3Q3LI67 103 aa1.83□□□□□ -2.12
LAMA4-217ENST00000521693 UBR4Q5T4S7 5183 aa1.82□□□□□ -2.12
LAMA4-217ENST00000521693 HERC2O95714 4834 aa1.82□□□□□ -2.12
LAMA4-217ENST00000521693 TNP1P09430 55 aa1.81□□□□□ -2.12
LAMA4-217ENST00000521693 COL7A1Q02388 2944 aa1.81□□□□□ -2.12
LAMA4-217ENST00000521693 DNAH3Q8TD57 4116 aa1.8□□□□□ -2.12
LAMA4-217ENST00000521693 LYSTQ99698 3801 aa1.8□□□□□ -2.12
LAMA4-217ENST00000521693 DYNC2H1Q8NCM8 4307 aaKnown RBP1.79□□□□□ -2.12
LAMA4-217ENST00000521693 CMYA5Q8N3K9 4069 aa1.78□□□□□ -2.12
LAMA4-217ENST00000521693 KRTAP4-1Q9BYQ7 146 aa1.78□□□□□ -2.12
LAMA4-217ENST00000521693 FRAS1Q86XX4 4008 aa1.77□□□□□ -2.13
LAMA4-217ENST00000521693 SACSQ9NZJ4 4579 aa1.77□□□□□ -2.13
LAMA4-217ENST00000521693 VPS13DQ5THJ4 4388 aa1.77□□□□□ -2.13
LAMA4-217ENST00000521693 C9orf92A6NGG3 77 aa1.77□□□□□ -2.13
LAMA4-217ENST00000521693 DNAH10Q8IVF4 4471 aa1.77□□□□□ -2.13
LAMA4-217ENST00000521693 KRTAP12-4P60329 112 aa1.76□□□□□ -2.13
LAMA4-217ENST00000521693 CSMD3Q7Z407 3707 aa1.76□□□□□ -2.13
LAMA4-217ENST00000521693 DNAH8Q96JB1 4490 aa1.76□□□□□ -2.13
LAMA4-217ENST00000521693 STAB2Q8WWQ8 2551 aa1.75□□□□□ -2.13
LAMA4-217ENST00000521693 DNAH9Q9NYC9 4486 aa1.74□□□□□ -2.13
LAMA4-217ENST00000521693 HECTD4Q9Y4D8 3996 aa1.73□□□□□ -2.13
LAMA4-217ENST00000521693 KRTAP12-3P60328 96 aa1.73□□□□□ -2.13
LAMA4-217ENST00000521693 ABCA13Q86UQ4 5058 aa1.72□□□□□ -2.13
LAMA4-217ENST00000521693 DNAH7Q8WXX0 4024 aa1.72□□□□□ -2.13
LAMA4-217ENST00000521693 KIAA1109Q2LD37 5005 aa1.72□□□□□ -2.13
LAMA4-217ENST00000521693 HUWE1Q7Z6Z7 4374 aaKnown RBP1.72□□□□□ -2.13
LAMA4-217ENST00000521693 DNAH17Q9UFH2 4485 aa1.71□□□□□ -2.14
LAMA4-217ENST00000521693 DMBT1Q9UGM3 2413 aaPredicted RBP1.7□□□□□ -2.14
LAMA4-217ENST00000521693 HERC1Q15751 4861 aa1.7□□□□□ -2.14
LAMA4-217ENST00000521693 DNAH6Q9C0G6 4158 aa1.68□□□□□ -2.14
LAMA4-217ENST00000521693 PLECQ15149 4684 aaKnown RBP1.67□□□□□ -2.14
LAMA4-217ENST00000521693 DNAH11Q96DT5 4516 aa1.65□□□□□ -2.15
LAMA4-217ENST00000521693 KMT2AQ03164 3969 aa1.65□□□□□ -2.15
LAMA4-217ENST00000521693 DNAH2Q9P225 4427 aa1.65□□□□□ -2.15
LAMA4-217ENST00000521693 STARD9Q9P2P6 4700 aa1.62□□□□□ -2.15
LAMA4-217ENST00000521693 FCGBPQ9Y6R7 5405 aaPredicted RBP1.62□□□□□ -2.15
LAMA4-217ENST00000521693 KRTAP10-4P60372 401 aaPredicted RBP1.61□□□□□ -2.15
LAMA4-217ENST00000521693 DNAH5Q8TE73 4624 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms