RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 CEP290O15078 2479 aa1.08□□□□□ -2.24
SKP1-208ENST00000521216 ANK3Q12955 4377 aaKnown RBP1.08□□□□□ -2.24
SKP1-208ENST00000521216 CMYA5Q8N3K9 4069 aa1.08□□□□□ -2.24
SKP1-208ENST00000521216 ASPMQ8IZT6 3477 aa1.08□□□□□ -2.24
SKP1-208ENST00000521216 NOTCH1P46531 2555 aa1.07□□□□□ -2.24
SKP1-208ENST00000521216 PKD1L2Q7Z442 2459 aa1.07□□□□□ -2.24
SKP1-208ENST00000521216 DNAH3Q8TD57 4116 aa1.07□□□□□ -2.24
SKP1-208ENST00000521216 DNAH6Q9C0G6 4158 aa1.06□□□□□ -2.24
SKP1-208ENST00000521216 CENPEQ02224 2701 aa1.06□□□□□ -2.24
SKP1-208ENST00000521216 TGP01266 2768 aa1.06□□□□□ -2.24
SKP1-208ENST00000521216 KRTAP2-3P0C7H8 128 aa1.06□□□□□ -2.24
SKP1-208ENST00000521216 KRTAP8-1Q8IUC2 63 aa1.06□□□□□ -2.24
SKP1-208ENST00000521216 KRTAP2-4Q9BYR9 128 aa1.06□□□□□ -2.24
SKP1-208ENST00000521216 KRTAP2-1Q9BYU5 128 aa1.06□□□□□ -2.24
SKP1-208ENST00000521216 DYNC2H1Q8NCM8 4307 aaKnown RBP1.06□□□□□ -2.24
SKP1-208ENST00000521216 CDH23Q9H251 3354 aa1.06□□□□□ -2.24
SKP1-208ENST00000521216 DNAH2Q9P225 4427 aa1.06□□□□□ -2.24
SKP1-208ENST00000521216 CREBBPQ92793 2442 aa1.06□□□□□ -2.24
SKP1-208ENST00000521216 M0R2T5 61 aa1.05□□□□□ -2.24
SKP1-208ENST00000521216 CACNA1AO00555 2505 aa1.05□□□□□ -2.24
SKP1-208ENST00000521216 SETD2Q9BYW2 2564 aaPredicted RBP1.04□□□□□ -2.24
SKP1-208ENST00000521216 SETXQ7Z333 2677 aaKnown RBP1.04□□□□□ -2.24
SKP1-208ENST00000521216 MYO15AQ9UKN7 3530 aa1.04□□□□□ -2.24
SKP1-208ENST00000521216 DMBT1Q9UGM3 2413 aaPredicted RBP1.04□□□□□ -2.24
SKP1-208ENST00000521216 TTC28Q96AY4 2481 aa1.04□□□□□ -2.24
SKP1-208ENST00000521216 HUWE1Q7Z6Z7 4374 aaKnown RBP1.04□□□□□ -2.24
SKP1-208ENST00000521216 DNAH9Q9NYC9 4486 aa1.04□□□□□ -2.24
SKP1-208ENST00000521216 HRNRQ86YZ3 2850 aaPredicted RBP1.04□□□□□ -2.24
SKP1-208ENST00000521216 FBN2P35556 2912 aa1.04□□□□□ -2.24
SKP1-208ENST00000521216 DNAH10Q8IVF4 4471 aa1.04□□□□□ -2.24
SKP1-208ENST00000521216 KMT2AQ03164 3969 aa1.04□□□□□ -2.24
SKP1-208ENST00000521216 HECTD4Q9Y4D8 3996 aa1.04□□□□□ -2.24
SKP1-208ENST00000521216 USP9YO00507 2555 aaPredicted RBP1.03□□□□□ -2.24
SKP1-208ENST00000521216 CSMD2Q7Z408 3487 aa1.03□□□□□ -2.24
SKP1-208ENST00000521216 DNAH17Q9UFH2 4485 aa1.03□□□□□ -2.24
SKP1-208ENST00000521216 PKD1L1Q8TDX9 2849 aa1.03□□□□□ -2.24
SKP1-208ENST00000521216 FLGP20930 4061 aaPredicted RBP1.03□□□□□ -2.24
SKP1-208ENST00000521216 DNAH7Q8WXX0 4024 aa1.03□□□□□ -2.25
SKP1-208ENST00000521216 PKD1P98161 4303 aa1.03□□□□□ -2.25
SKP1-208ENST00000521216 SONP18583 2426 aaKnown RBP1.03□□□□□ -2.25
SKP1-208ENST00000521216 RIF1Q5UIP0 2472 aaKnown RBP1.03□□□□□ -2.25
SKP1-208ENST00000521216 HECTD1Q9ULT8 2610 aa1.02□□□□□ -2.25
SKP1-208ENST00000521216 CFAP46Q8IYW2 2715 aa1.02□□□□□ -2.25
SKP1-208ENST00000521216 LRRK2Q5S007 2527 aa1.02□□□□□ -2.25
SKP1-208ENST00000521216 KRTAP5-10Q6L8G5 202 aa1.02□□□□□ -2.25
SKP1-208ENST00000521216 VPS13BQ7Z7G8 4022 aa1.02□□□□□ -2.25
SKP1-208ENST00000521216 ZNF292O60281 2723 aa1.02□□□□□ -2.25
SKP1-208ENST00000521216 USP24Q9UPU5 2620 aa1.02□□□□□ -2.25
SKP1-208ENST00000521216 TLN1Q9Y490 2541 aaKnown RBP1.01□□□□□ -2.25
SKP1-208ENST00000521216 ZNF469Q96JG9 3925 aaPredicted RBP1.01□□□□□ -2.25
SKP1-208ENST00000521216 USP9XQ93008 2570 aaPredicted RBP1.01□□□□□ -2.25
SKP1-208ENST00000521216 EYSQ5T1H1 3165 aa1□□□□□ -2.25
SKP1-208ENST00000521216 ZANQ9Y493 2812 aa1□□□□□ -2.25
SKP1-208ENST00000521216 ABCA12Q86UK0 2595 aa1□□□□□ -2.25
SKP1-208ENST00000521216 MXRA5Q9NR99 2828 aa1□□□□□ -2.25
SKP1-208ENST00000521216 PKHD1L1Q86WI1 4243 aa1□□□□□ -2.25
SKP1-208ENST00000521216 FAT3Q8TDW7 4589 aa0.99□□□□□ -2.25
SKP1-208ENST00000521216 DOPEY1Q5JWR5 2465 aa0.99□□□□□ -2.25
SKP1-208ENST00000521216 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
SKP1-208ENST00000521216 TEP1Q99973 2627 aaKnown RBP0.99□□□□□ -2.25
SKP1-208ENST00000521216 SPTAN1Q13813 2472 aaKnown RBP0.99□□□□□ -2.25
SKP1-208ENST00000521216 CUBNO60494 3623 aa0.99□□□□□ -2.25
SKP1-208ENST00000521216 NBEAL1Q6ZS30 2694 aa0.99□□□□□ -2.25
SKP1-208ENST00000521216 NBEAL2Q6ZNJ1 2754 aa0.98□□□□□ -2.25
SKP1-208ENST00000521216 ITPR2Q14571 2701 aa0.98□□□□□ -2.25
SKP1-208ENST00000521216 TLN2Q9Y4G6 2542 aa0.98□□□□□ -2.25
SKP1-208ENST00000521216 APOBP04114 4563 aaKnown RBP0.98□□□□□ -2.25
SKP1-208ENST00000521216 HSPG2P98160 4391 aa0.98□□□□□ -2.25
SKP1-208ENST00000521216 VPS13CQ709C8 3753 aa0.98□□□□□ -2.25
SKP1-208ENST00000521216 PIEZO1Q92508 2521 aa0.97□□□□□ -2.25
SKP1-208ENST00000521216 UNC79Q9P2D8 2635 aa0.97□□□□□ -2.25
SKP1-208ENST00000521216 CHD8Q9HCK8 2581 aa0.97□□□□□ -2.25
SKP1-208ENST00000521216 SVEP1Q4LDE5 3571 aa0.97□□□□□ -2.25
SKP1-208ENST00000521216 FLNCQ14315 2725 aa0.97□□□□□ -2.25
SKP1-208ENST00000521216 GCN1Q92616 2671 aaKnown RBP0.96□□□□□ -2.26
SKP1-208ENST00000521216 ACANP16112 2415 aa0.96□□□□□ -2.26
SKP1-208ENST00000521216 MYO9AB2RTY4 2548 aa0.96□□□□□ -2.26
SKP1-208ENST00000521216 BDP1A6H8Y1 2624 aa0.96□□□□□ -2.26
SKP1-208ENST00000521216 DNAH5Q8TE73 4624 aa0.96□□□□□ -2.26
SKP1-208ENST00000521216 EPG5Q9HCE0 2579 aa0.96□□□□□ -2.26
SKP1-208ENST00000521216 MTORP42345 2549 aa0.95□□□□□ -2.26
SKP1-208ENST00000521216 TENM3Q9P273 2699 aa0.95□□□□□ -2.26
SKP1-208ENST00000521216 SMR3BP02814 79 aaPredicted RBP0.94□□□□□ -2.26
SKP1-208ENST00000521216 HIVEP1P15822 2718 aa0.93□□□□□ -2.26
SKP1-208ENST00000521216 FAT2Q9NYQ8 4349 aa0.93□□□□□ -2.26
SKP1-208ENST00000521216 STAB2Q8WWQ8 2551 aa0.92□□□□□ -2.26
SKP1-208ENST00000521216 NSD1Q96L73 2696 aaPredicted RBP0.92□□□□□ -2.26
SKP1-208ENST00000521216 ZFYVE26Q68DK2 2539 aa0.91□□□□□ -2.26
SKP1-208ENST00000521216 PLECQ15149 4684 aaKnown RBP0.91□□□□□ -2.26
SKP1-208ENST00000521216 LRP1Q07954 4544 aaKnown RBP0.91□□□□□ -2.26
SKP1-208ENST00000521216 ANKRD11Q6UB99 2663 aaPredicted RBP0.91□□□□□ -2.26
SKP1-208ENST00000521216 STARD9Q9P2P6 4700 aa0.9□□□□□ -2.27
SKP1-208ENST00000521216 PKHD1P08F94 4074 aa0.89□□□□□ -2.27
SKP1-208ENST00000521216 POLQO75417 2590 aa0.89□□□□□ -2.27
SKP1-208ENST00000521216 DYNC1H1Q14204 4646 aaKnown RBP0.89□□□□□ -2.27
SKP1-208ENST00000521216 TNXBP22105 4242 aa0.89□□□□□ -2.27
SKP1-208ENST00000521216 ATRQ13535 2644 aa0.89□□□□□ -2.27
SKP1-208ENST00000521216 STAB1Q9NY15 2570 aa0.89□□□□□ -2.27
SKP1-208ENST00000521216 LPAP08519 4548 aa0.88□□□□□ -2.27
SKP1-208ENST00000521216 KRTAP19-5Q3LI72 72 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms