RNA–Protein interactions for RNA: ENST00000520776.5

EFCAB13-208, Transcript of EF-hand calcium binding domain 13, human

TSL 2

Gene EFCAB13, Length 1,979 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFCAB13-208	ENST00000520776	MYO15A	Q9UKN7	3530 aa		0.41	□□□□□ -2.34
EFCAB13-208	ENST00000520776	C9orf92	A6NGG3	77 aa		0.41	□□□□□ -2.34
EFCAB13-208	ENST00000520776	DEFB4A	O15263	64 aa		0.41	□□□□□ -2.34
EFCAB13-208	ENST00000520776	TNP1	P09430	55 aa		0.41	□□□□□ -2.34
EFCAB13-208	ENST00000520776	LYST	Q99698	3801 aa		0.41	□□□□□ -2.34
EFCAB13-208	ENST00000520776	TRIO	O75962	3097 aa		0.41	□□□□□ -2.34
EFCAB13-208	ENST00000520776	DNAH12	Q6ZR08	3092 aa		0.41	□□□□□ -2.34
EFCAB13-208	ENST00000520776	COL12A1	Q99715	3063 aa		0.41	□□□□□ -2.34
EFCAB13-208	ENST00000520776	BRCA2	P51587	3418 aa		0.41	□□□□□ -2.34
EFCAB13-208	ENST00000520776	LAMA3	Q16787	3333 aa		0.41	□□□□□ -2.34
EFCAB13-208	ENST00000520776	FLNC	Q14315	2725 aa		0.41	□□□□□ -2.34
EFCAB13-208	ENST00000520776	APC2	O95996	2303 aa		0.41	□□□□□ -2.34
EFCAB13-208	ENST00000520776	ITPR1	Q14643	2758 aa		0.41	□□□□□ -2.34
EFCAB13-208	ENST00000520776	COL6A5	A8TX70	2615 aa		0.41	□□□□□ -2.34
EFCAB13-208	ENST00000520776	LRBA	P50851	2863 aa		0.41	□□□□□ -2.34
EFCAB13-208	ENST00000520776	FAM186A	A6NE01	2351 aa		0.41	□□□□□ -2.34
EFCAB13-208	ENST00000520776	FRY	Q5TBA9	3013 aa		0.41	□□□□□ -2.34
EFCAB13-208	ENST00000520776	HIVEP3	Q5T1R4	2406 aa		0.4	□□□□□ -2.34
EFCAB13-208	ENST00000520776	LAMA5	O15230	3695 aa		0.4	□□□□□ -2.34
EFCAB13-208	ENST00000520776	USP24	Q9UPU5	2620 aa		0.4	□□□□□ -2.35
EFCAB13-208	ENST00000520776	UTP20	O75691	2785 aa	Known RBP	0.4	□□□□□ -2.35
EFCAB13-208	ENST00000520776	FREM2	Q5SZK8	3169 aa		0.4	□□□□□ -2.35
EFCAB13-208	ENST00000520776	CSMD1	Q96PZ7	3565 aa		0.4	□□□□□ -2.35
EFCAB13-208	ENST00000520776	LRRK2	Q5S007	2527 aa		0.4	□□□□□ -2.35
EFCAB13-208	ENST00000520776	LOC400499	M0QZD8	3231 aa		0.4	□□□□□ -2.35
EFCAB13-208	ENST00000520776	DNAH8	Q96JB1	4490 aa		0.4	□□□□□ -2.35
EFCAB13-208	ENST00000520776	CDH23	Q9H251	3354 aa		0.4	□□□□□ -2.35
EFCAB13-208	ENST00000520776	ITPR3	Q14573	2671 aa		0.39	□□□□□ -2.35
EFCAB13-208	ENST00000520776	MAP1A	P78559	2803 aa	Predicted RBP	0.39	□□□□□ -2.35
EFCAB13-208	ENST00000520776	KALRN	O60229	2985 aa		0.39	□□□□□ -2.35
EFCAB13-208	ENST00000520776	MYCBP2	O75592	4640 aa		0.39	□□□□□ -2.35
EFCAB13-208	ENST00000520776	EP400	Q96L91	3159 aa		0.39	□□□□□ -2.35
EFCAB13-208	ENST00000520776	ZFYVE26	Q68DK2	2539 aa		0.39	□□□□□ -2.35
EFCAB13-208	ENST00000520776	ANKHD1	Q8IWZ3	2542 aa	Known RBP	0.39	□□□□□ -2.35
EFCAB13-208	ENST00000520776	SPG11	Q96JI7	2443 aa		0.39	□□□□□ -2.35
EFCAB13-208	ENST00000520776	FAT2	Q9NYQ8	4349 aa		0.39	□□□□□ -2.35
EFCAB13-208	ENST00000520776	HIVEP1	P15822	2718 aa		0.39	□□□□□ -2.35
EFCAB13-208	ENST00000520776	PRKDC	P78527	4128 aa	Known RBP	0.39	□□□□□ -2.35
EFCAB13-208	ENST00000520776	LAMA2	P24043	3122 aa	Known RBP	0.39	□□□□□ -2.35
EFCAB13-208	ENST00000520776	CACNA1A	O00555	2505 aa		0.38	□□□□□ -2.35
EFCAB13-208	ENST00000520776	MUC3A	Q02505	3323 aa		0.38	□□□□□ -2.35
EFCAB13-208	ENST00000520776	DMXL2	Q8TDJ6	3036 aa		0.38	□□□□□ -2.35
EFCAB13-208	ENST00000520776	USP9X	Q93008	2570 aa	Predicted RBP	0.38	□□□□□ -2.35
EFCAB13-208	ENST00000520776	VPS13B	Q7Z7G8	4022 aa		0.38	□□□□□ -2.35
EFCAB13-208	ENST00000520776	PKHD1L1	Q86WI1	4243 aa		0.38	□□□□□ -2.35
EFCAB13-208	ENST00000520776	KMT2A	Q03164	3969 aa		0.38	□□□□□ -2.35
EFCAB13-208	ENST00000520776	DNAH1	Q9P2D7	4330 aa		0.38	□□□□□ -2.35
EFCAB13-208	ENST00000520776	DMXL1	Q9Y485	3027 aa		0.38	□□□□□ -2.35
EFCAB13-208	ENST00000520776	CSMD2	Q7Z408	3487 aa		0.38	□□□□□ -2.35
EFCAB13-208	ENST00000520776	NIPBL	Q6KC79	2804 aa	eCLIP	0.38	□□□□□ -2.35
EFCAB13-208	ENST00000520776	ZAN	Q9Y493	2812 aa		0.38	□□□□□ -2.35
EFCAB13-208	ENST00000520776	GCN1	Q92616	2671 aa	Known RBP	0.38	□□□□□ -2.35
EFCAB13-208	ENST00000520776	CUBN	O60494	3623 aa		0.37	□□□□□ -2.35
EFCAB13-208	ENST00000520776	PHGR1	C9JFL3	82 aa		0.37	□□□□□ -2.35
EFCAB13-208	ENST00000520776	TACC2	O95359	2948 aa		0.37	□□□□□ -2.35
EFCAB13-208	ENST00000520776	MYO18B	Q8IUG5	2567 aa		0.37	□□□□□ -2.35
EFCAB13-208	ENST00000520776	DYNC2H1	Q8NCM8	4307 aa	Known RBP	0.37	□□□□□ -2.35
EFCAB13-208	ENST00000520776	SVEP1	Q4LDE5	3571 aa		0.37	□□□□□ -2.35
EFCAB13-208	ENST00000520776	PKD1L1	Q8TDX9	2849 aa		0.37	□□□□□ -2.35
EFCAB13-208	ENST00000520776	SON	P18583	2426 aa	Known RBP	0.37	□□□□□ -2.35
EFCAB13-208	ENST00000520776	SETX	Q7Z333	2677 aa	Known RBP	0.37	□□□□□ -2.35
EFCAB13-208	ENST00000520776	ITPR2	Q14571	2701 aa		0.37	□□□□□ -2.35
EFCAB13-208	ENST00000520776	KRTAP8-1	Q8IUC2	63 aa		0.37	□□□□□ -2.35
EFCAB13-208	ENST00000520776	MXRA5	Q9NR99	2828 aa		0.37	□□□□□ -2.35
EFCAB13-208	ENST00000520776	ANKRD11	Q6UB99	2663 aa	Predicted RBP	0.37	□□□□□ -2.35
EFCAB13-208	ENST00000520776	KIAA1109	Q2LD37	5005 aa		0.37	□□□□□ -2.35
EFCAB13-208	ENST00000520776	SACS	Q9NZJ4	4579 aa		0.37	□□□□□ -2.35
EFCAB13-208	ENST00000520776	DNAH3	Q8TD57	4116 aa		0.37	□□□□□ -2.35
EFCAB13-208	ENST00000520776	NCOR2	Q9Y618	2525 aa		0.37	□□□□□ -2.35
EFCAB13-208	ENST00000520776	LAMA1	P25391	3075 aa		0.36	□□□□□ -2.35
EFCAB13-208	ENST00000520776	PTPN13	Q12923	2485 aa		0.36	□□□□□ -2.35
EFCAB13-208	ENST00000520776	DOPEY1	Q5JWR5	2465 aa		0.36	□□□□□ -2.35
EFCAB13-208	ENST00000520776	CFAP46	Q8IYW2	2715 aa		0.36	□□□□□ -2.35
EFCAB13-208	ENST00000520776	TENM4	Q6N022	2769 aa		0.36	□□□□□ -2.35
EFCAB13-208	ENST00000520776	TEX15	Q9BXT5	2789 aa		0.36	□□□□□ -2.35
EFCAB13-208	ENST00000520776	MAST4	O15021	2626 aa		0.36	□□□□□ -2.35
EFCAB13-208	ENST00000520776	NBEAL1	Q6ZS30	2694 aa		0.36	□□□□□ -2.35
EFCAB13-208	ENST00000520776	ADGRG4	Q8IZF6	3080 aa		0.36	□□□□□ -2.35
EFCAB13-208	ENST00000520776	ACACB	O00763	2458 aa		0.36	□□□□□ -2.35
EFCAB13-208	ENST00000520776	ANK3	Q12955	4377 aa	Known RBP	0.36	□□□□□ -2.35
EFCAB13-208	ENST00000520776		M0R2T5	61 aa		0.36	□□□□□ -2.35
EFCAB13-208	ENST00000520776	COL7A1	Q02388	2944 aa		0.35	□□□□□ -2.35
EFCAB13-208	ENST00000520776	HRNR	Q86YZ3	2850 aa	Predicted RBP	0.35	□□□□□ -2.35
EFCAB13-208	ENST00000520776	STAB1	Q9NY15	2570 aa		0.35	□□□□□ -2.35
EFCAB13-208	ENST00000520776	TEP1	Q99973	2627 aa	Known RBP	0.35	□□□□□ -2.35
EFCAB13-208	ENST00000520776	ACAN	P16112	2415 aa		0.35	□□□□□ -2.35
EFCAB13-208	ENST00000520776	SPTAN1	Q13813	2472 aa	Known RBP	0.35	□□□□□ -2.35
EFCAB13-208	ENST00000520776	TRRAP	Q9Y4A5	3859 aa		0.35	□□□□□ -2.35
EFCAB13-208	ENST00000520776	NSD1	Q96L73	2696 aa	Predicted RBP	0.35	□□□□□ -2.35
EFCAB13-208	ENST00000520776	CENPE	Q02224	2701 aa		0.35	□□□□□ -2.35
EFCAB13-208	ENST00000520776	DNAH7	Q8WXX0	4024 aa		0.35	□□□□□ -2.35
EFCAB13-208	ENST00000520776	FASN	P49327	2511 aa	Known RBP	0.35	□□□□□ -2.35
EFCAB13-208	ENST00000520776	TLN1	Q9Y490	2541 aa	Known RBP	0.35	□□□□□ -2.35
EFCAB13-208	ENST00000520776	TG	P01266	2768 aa		0.34	□□□□□ -2.35
EFCAB13-208	ENST00000520776	VPS13C	Q709C8	3753 aa		0.34	□□□□□ -2.35
EFCAB13-208	ENST00000520776	TLN2	Q9Y4G6	2542 aa		0.34	□□□□□ -2.35
EFCAB13-208	ENST00000520776	DNAH2	Q9P225	4427 aa		0.34	□□□□□ -2.35
EFCAB13-208	ENST00000520776	DNAH17	Q9UFH2	4485 aa		0.34	□□□□□ -2.35
EFCAB13-208	ENST00000520776	MUC2	Q02817	5179 aa		0.34	□□□□□ -2.35
EFCAB13-208	ENST00000520776	FLNB	O75369	2602 aa	Known RBP	0.34	□□□□□ -2.35

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms