RNA–Protein interactions for RNA: ENST00000518436.5

LINC01339-202, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 375 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-202ENST00000518436 RPL39P5Q59GN2 51 aa1.12□□□□□ -2.23
LINC01339-202ENST00000518436 MACF1Q9UPN3 7388 aaKnown RBP1.11□□□□□ -2.23
LINC01339-202ENST00000518436 MYMXA0A1B0GTQ4 84 aa1.11□□□□□ -2.23
LINC01339-202ENST00000518436 WFDC2Q14508 124 aa1.11□□□□□ -2.23
LINC01339-202ENST00000518436 PIGYQ3MUY2 71 aa1.11□□□□□ -2.23
LINC01339-202ENST00000518436 SSBP3-AS1Q7Z2R9 100 aa1.11□□□□□ -2.23
LINC01339-202ENST00000518436 RHPN1-AS1Q9BWJ2 59 aa1.11□□□□□ -2.23
LINC01339-202ENST00000518436 CNFNQ9BYD5 112 aa1.11□□□□□ -2.23
LINC01339-202ENST00000518436 UBE2D4Q9Y2X8 147 aa1.11□□□□□ -2.23
LINC01339-202ENST00000518436 USH2AO75445 5202 aa1.11□□□□□ -2.23
LINC01339-202ENST00000518436 GNGT1P63211 74 aa1.1□□□□□ -2.23
LINC01339-202ENST00000518436 LINC01590Q5TEZ4 76 aa1.1□□□□□ -2.23
LINC01339-202ENST00000518436 DEFB107AQ8IZN7 70 aa1.1□□□□□ -2.23
LINC01339-202ENST00000518436 SSPOA2VEC9 5147 aa1.1□□□□□ -2.23
LINC01339-202ENST00000518436 NEBP20929 6669 aa1.09□□□□□ -2.23
LINC01339-202ENST00000518436 A0A096LPF7 62 aa1.09□□□□□ -2.23
LINC01339-202ENST00000518436 DEFB1P60022 68 aa1.09□□□□□ -2.23
LINC01339-202ENST00000518436 NDUFA4O00483 81 aa1.08□□□□□ -2.24
LINC01339-202ENST00000518436 HTN1P15515 57 aa1.08□□□□□ -2.24
LINC01339-202ENST00000518436 COX6A2Q02221 97 aa1.08□□□□□ -2.24
LINC01339-202ENST00000518436 C6orf201Q7Z4U5 140 aa1.08□□□□□ -2.24
LINC01339-202ENST00000518436 MUC17Q685J3 4493 aa1.07□□□□□ -2.24
LINC01339-202ENST00000518436 TRBV7-4A0A0J9YYF1 115 aa1.07□□□□□ -2.24
LINC01339-202ENST00000518436 WFDC10BQ8IUB3 73 aa1.07□□□□□ -2.24
LINC01339-202ENST00000518436 NOP10Q9NPE3 64 aaKnown RBP1.07□□□□□ -2.24
LINC01339-202ENST00000518436 CMC2Q9NRP2 79 aa1.07□□□□□ -2.24
LINC01339-202ENST00000518436 ABRACLQ9P1F3 81 aa1.07□□□□□ -2.24
LINC01339-202ENST00000518436 A0A1B0GU69 56 aa1.06□□□□□ -2.24
LINC01339-202ENST00000518436 CEBPZOSA8MTT3 80 aa1.06□□□□□ -2.24
LINC01339-202ENST00000518436 IGLC3P0DOY3 106 aa1.06□□□□□ -2.24
LINC01339-202ENST00000518436 SPINK7P58062 85 aa1.06□□□□□ -2.24
LINC01339-202ENST00000518436 SNRPGP62308 76 aaKnown RBP1.06□□□□□ -2.24
LINC01339-202ENST00000518436 A0A1B0GUT8 65 aa1.05□□□□□ -2.24
LINC01339-202ENST00000518436 IGLC2P0DOY2 106 aa1.05□□□□□ -2.24
LINC01339-202ENST00000518436 BVES-AS1Q5T3Y7 98 aa1.05□□□□□ -2.24
LINC01339-202ENST00000518436 TMEM167AQ8TBQ9 72 aa1.05□□□□□ -2.24
LINC01339-202ENST00000518436 TIMM8BQ9Y5J9 83 aaPredicted RBP1.05□□□□□ -2.24
LINC01339-202ENST00000518436 H3BNG1 76 aa1.04□□□□□ -2.24
LINC01339-202ENST00000518436 K7EIM0 57 aa1.04□□□□□ -2.24
LINC01339-202ENST00000518436 WT1-ASQ06250 92 aa1.04□□□□□ -2.24
LINC01339-202ENST00000518436 KRTAP20-1Q3LI63 56 aa1.04□□□□□ -2.24
LINC01339-202ENST00000518436 TP53AIP1Q9HCN2 124 aa1.04□□□□□ -2.24
LINC01339-202ENST00000518436 MUC12Q9UKN1 5478 aa1.04□□□□□ -2.24
LINC01339-202ENST00000518436 GPR98Q8WXG9 6306 aa1.03□□□□□ -2.24
LINC01339-202ENST00000518436 H3BUT2 72 aa1.03□□□□□ -2.24
LINC01339-202ENST00000518436 I3L2K1 104 aa1.03□□□□□ -2.24
LINC01339-202ENST00000518436 KLK9Q2XQG4 91 aa1.03□□□□□ -2.24
LINC01339-202ENST00000518436 SPINK6Q6UWN8 80 aa1.03□□□□□ -2.24
LINC01339-202ENST00000518436 LINC00959A0A1B0GUT2 108 aa1.02□□□□□ -2.25
LINC01339-202ENST00000518436 M0R2T5 61 aa1.02□□□□□ -2.25
LINC01339-202ENST00000518436 MT1HP80294 61 aa1.02□□□□□ -2.25
LINC01339-202ENST00000518436 PRCDQ00LT1 54 aa1.02□□□□□ -2.25
LINC01339-202ENST00000518436 C18orf32Q8TCD1 76 aa1.02□□□□□ -2.25
LINC01339-202ENST00000518436 PRO0255Q9UI72 69 aa1.02□□□□□ -2.25
LINC01339-202ENST00000518436 KMT2DO14686 5537 aa1.02□□□□□ -2.25
LINC01339-202ENST00000518436 LINC01556Q5JQF7 62 aa1.01□□□□□ -2.25
LINC01339-202ENST00000518436 ATP5EP2Q5VTU8 51 aa1.01□□□□□ -2.25
LINC01339-202ENST00000518436 MDN1Q9NU22 5596 aa1□□□□□ -2.25
LINC01339-202ENST00000518436 SFTA3P0C7M3 94 aa1□□□□□ -2.25
LINC01339-202ENST00000518436 ARHGAP5-AS1Q96IT6 56 aa1□□□□□ -2.25
LINC01339-202ENST00000518436 A8MTW9 85 aa0.99□□□□□ -2.25
LINC01339-202ENST00000518436 NDUFB1O75438 58 aa0.99□□□□□ -2.25
LINC01339-202ENST00000518436 SMCO4Q9NRQ5 59 aa0.99□□□□□ -2.25
LINC01339-202ENST00000518436 SPINK4O60575 86 aa0.98□□□□□ -2.25
LINC01339-202ENST00000518436 Q8IZM0 81 aa0.98□□□□□ -2.25
LINC01339-202ENST00000518436 KRTAP19-2Q3LHN2 52 aa0.97□□□□□ -2.25
LINC01339-202ENST00000518436 A0A096LNI7 61 aa0.96□□□□□ -2.26
LINC01339-202ENST00000518436 SNRPGP15A8MWD9 76 aa0.96□□□□□ -2.26
LINC01339-202ENST00000518436 PDCD5O14737 125 aa0.96□□□□□ -2.26
LINC01339-202ENST00000518436 CLPSL2Q6UWE3 100 aa0.96□□□□□ -2.26
LINC01339-202ENST00000518436 ENHOQ6UWT2 76 aa0.96□□□□□ -2.26
LINC01339-202ENST00000518436 COX6B2Q6YFQ2 88 aa0.96□□□□□ -2.26
LINC01339-202ENST00000518436 UMAD1C9J7I0 102 aa0.95□□□□□ -2.26
LINC01339-202ENST00000518436 CFDP00746 253 aaPredicted RBP0.95□□□□□ -2.26
LINC01339-202ENST00000518436 KRTAP2-3P0C7H8 128 aa0.95□□□□□ -2.26
LINC01339-202ENST00000518436 SMIM13P0DJ93 91 aa0.95□□□□□ -2.26
LINC01339-202ENST00000518436 KRTAP2-4Q9BYR9 128 aa0.95□□□□□ -2.26
LINC01339-202ENST00000518436 FLGP20930 4061 aaPredicted RBP0.94□□□□□ -2.26
LINC01339-202ENST00000518436 A0A087WWC5 75 aa0.94□□□□□ -2.26
LINC01339-202ENST00000518436 TRAV21A0A0B4J279 112 aa0.93□□□□□ -2.26
LINC01339-202ENST00000518436 IFI27P40305 119 aaPredicted RBP0.93□□□□□ -2.26
LINC01339-202ENST00000518436 KRTAP19-6Q3LI70 58 aa0.93□□□□□ -2.26
LINC01339-202ENST00000518436 K7EQZ3 153 aa0.92□□□□□ -2.26
LINC01339-202ENST00000518436 COX8AP10176 69 aa0.92□□□□□ -2.26
LINC01339-202ENST00000518436 COX7BP24311 80 aa0.92□□□□□ -2.26
LINC01339-202ENST00000518436 KRTAP2-1Q9BYU5 128 aa0.92□□□□□ -2.26
LINC01339-202ENST00000518436 FXYD6Q9H0Q3 95 aa0.92□□□□□ -2.26
LINC01339-202ENST00000518436 CRIPTQ9P021 101 aa0.92□□□□□ -2.26
LINC01339-202ENST00000518436 A0A087WXM4 84 aa0.91□□□□□ -2.26
LINC01339-202ENST00000518436 IAPPP10997 89 aa0.91□□□□□ -2.26
LINC01339-202ENST00000518436 FXYD6-FXYD2A0A087WZ82 144 aa0.9□□□□□ -2.27
LINC01339-202ENST00000518436 MT2AP02795 61 aa0.9□□□□□ -2.27
LINC01339-202ENST00000518436 MT1FP04733 61 aa0.9□□□□□ -2.27
LINC01339-202ENST00000518436 AHNAK2Q8IVF2 5795 aa0.9□□□□□ -2.27
LINC01339-202ENST00000518436 DSTQ03001 7570 aaKnown RBP0.9□□□□□ -2.27
LINC01339-202ENST00000518436 I3L3M4 83 aa0.89□□□□□ -2.27
LINC01339-202ENST00000518436 C9orf92A6NGG3 77 aa0.88□□□□□ -2.27
LINC01339-202ENST00000518436 SPRR2EP22531 72 aa0.88□□□□□ -2.27
LINC01339-202ENST00000518436 SPRR2BP35325 72 aa0.88□□□□□ -2.27
LINC01339-202ENST00000518436 SPRR2AP35326 72 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms