RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 KRTAP10-4P60372 401 aaPredicted RBP1.76□□□□□ -2.13
RNU4ATAC3P-201ENST00000516699 KRTAP3-1Q9BYR8 98 aa1.76□□□□□ -2.13
RNU4ATAC3P-201ENST00000516699 CRIPTQ9P021 101 aa1.76□□□□□ -2.13
RNU4ATAC3P-201ENST00000516699 KMT2AQ03164 3969 aa1.76□□□□□ -2.13
RNU4ATAC3P-201ENST00000516699 PLECQ15149 4684 aaKnown RBP1.75□□□□□ -2.13
RNU4ATAC3P-201ENST00000516699 KRTAP4-9Q9BYQ8 210 aa1.74□□□□□ -2.13
RNU4ATAC3P-201ENST00000516699 KRTAP4-2Q9BYR5 136 aa1.74□□□□□ -2.13
RNU4ATAC3P-201ENST00000516699 DNAH8Q96JB1 4490 aa1.74□□□□□ -2.13
RNU4ATAC3P-201ENST00000516699 H3BS24 57 aa1.73□□□□□ -2.13
RNU4ATAC3P-201ENST00000516699 KRTAP10-8P60410 259 aa1.73□□□□□ -2.13
RNU4ATAC3P-201ENST00000516699 TPRXLQ17RH7 258 aa1.73□□□□□ -2.13
RNU4ATAC3P-201ENST00000516699 Q5VSD8 79 aa1.73□□□□□ -2.13
RNU4ATAC3P-201ENST00000516699 FLG2Q5D862 2391 aaPredicted RBP1.72□□□□□ -2.13
RNU4ATAC3P-201ENST00000516699 KRTAP10-6P60371 365 aaPredicted RBP1.72□□□□□ -2.13
RNU4ATAC3P-201ENST00000516699 SPINT4Q6UDR6 99 aa1.72□□□□□ -2.13
RNU4ATAC3P-201ENST00000516699 DNAH2Q9P225 4427 aa1.72□□□□□ -2.13
RNU4ATAC3P-201ENST00000516699 VPS13BQ7Z7G8 4022 aa1.71□□□□□ -2.14
RNU4ATAC3P-201ENST00000516699 DNAH11Q96DT5 4516 aa1.7□□□□□ -2.14
RNU4ATAC3P-201ENST00000516699 A0A0D9SG42 100 aa1.7□□□□□ -2.14
RNU4ATAC3P-201ENST00000516699 LCE4AQ5TA78 99 aa1.7□□□□□ -2.14
RNU4ATAC3P-201ENST00000516699 SEC61BP60468 96 aaKnown RBP1.69□□□□□ -2.14
RNU4ATAC3P-201ENST00000516699 PKD1P98161 4303 aa1.68□□□□□ -2.14
RNU4ATAC3P-201ENST00000516699 PKHD1P08F94 4074 aa1.68□□□□□ -2.14
RNU4ATAC3P-201ENST00000516699 KRTAP4-11Q9BYQ6 195 aa1.68□□□□□ -2.14
RNU4ATAC3P-201ENST00000516699 R4GN34 69 aa1.68□□□□□ -2.14
RNU4ATAC3P-201ENST00000516699 DNAH5Q8TE73 4624 aa1.67□□□□□ -2.14
RNU4ATAC3P-201ENST00000516699 DMBT1Q9UGM3 2413 aaPredicted RBP1.67□□□□□ -2.14
RNU4ATAC3P-201ENST00000516699 KRTAP12-1P59990 96 aa1.67□□□□□ -2.14
RNU4ATAC3P-201ENST00000516699 KRTAP13-4Q3LI77 160 aa1.67□□□□□ -2.14
RNU4ATAC3P-201ENST00000516699 PP632Q6XCG6 107 aa1.67□□□□□ -2.14
RNU4ATAC3P-201ENST00000516699 PKHD1L1Q86WI1 4243 aa1.66□□□□□ -2.14
RNU4ATAC3P-201ENST00000516699 P0C880 135 aa1.66□□□□□ -2.14
RNU4ATAC3P-201ENST00000516699 KRTAP17-1Q9BYP8 105 aa1.66□□□□□ -2.14
RNU4ATAC3P-201ENST00000516699 KRTAP4-5Q9BYR2 181 aa1.66□□□□□ -2.14
RNU4ATAC3P-201ENST00000516699 KRTAP12-2P59991 146 aa1.65□□□□□ -2.15
RNU4ATAC3P-201ENST00000516699 FAT2Q9NYQ8 4349 aa1.65□□□□□ -2.15
RNU4ATAC3P-201ENST00000516699 SACSQ9NZJ4 4579 aa1.64□□□□□ -2.15
RNU4ATAC3P-201ENST00000516699 KRTAP9-7A8MTY7 169 aa1.64□□□□□ -2.15
RNU4ATAC3P-201ENST00000516699 MT1HL1P0DM35 61 aa1.63□□□□□ -2.15
RNU4ATAC3P-201ENST00000516699 HYDINQ4G0P3 5121 aa1.62□□□□□ -2.15
RNU4ATAC3P-201ENST00000516699 LRP1BQ9NZR2 4599 aa1.62□□□□□ -2.15
RNU4ATAC3P-201ENST00000516699 KRTAP15-1Q3LI76 137 aa1.62□□□□□ -2.15
RNU4ATAC3P-201ENST00000516699 KRTAP23-1A1A580 65 aa1.61□□□□□ -2.15
RNU4ATAC3P-201ENST00000516699 LUZP6Q538Z0 58 aa1.61□□□□□ -2.15
RNU4ATAC3P-201ENST00000516699 APOBP04114 4563 aaKnown RBP1.61□□□□□ -2.15
RNU4ATAC3P-201ENST00000516699 NDUFAF8A1L188 74 aa1.6□□□□□ -2.15
RNU4ATAC3P-201ENST00000516699 LCE5AQ5TCM9 118 aa1.6□□□□□ -2.15
RNU4ATAC3P-201ENST00000516699 KRTAP5-3Q6L8H2 238 aa1.6□□□□□ -2.15
RNU4ATAC3P-201ENST00000516699 CAMK2N1Q7Z7J9 78 aa1.6□□□□□ -2.15
RNU4ATAC3P-201ENST00000516699 C10orf95Q9H7T3 257 aa1.6□□□□□ -2.15
RNU4ATAC3P-201ENST00000516699 TNXBP22105 4242 aa1.6□□□□□ -2.15
RNU4ATAC3P-201ENST00000516699 PLAC4Q8WY50 150 aa1.58□□□□□ -2.16
RNU4ATAC3P-201ENST00000516699 TNP1P09430 55 aa1.57□□□□□ -2.16
RNU4ATAC3P-201ENST00000516699 A0A0A0MQY5 61 aa1.56□□□□□ -2.16
RNU4ATAC3P-201ENST00000516699 KRTAP9-3Q9BYQ3 159 aa1.56□□□□□ -2.16
RNU4ATAC3P-201ENST00000516699 DYNC1H1Q14204 4646 aaKnown RBP1.55□□□□□ -2.16
RNU4ATAC3P-201ENST00000516699 DNHD1Q96M86 4753 aa1.53□□□□□ -2.16
RNU4ATAC3P-201ENST00000516699 KRTAP9-8Q9BYQ0 159 aa1.53□□□□□ -2.16
RNU4ATAC3P-201ENST00000516699 HSPG2P98160 4391 aa1.52□□□□□ -2.17
RNU4ATAC3P-201ENST00000516699 FAT1Q14517 4588 aa1.52□□□□□ -2.17
RNU4ATAC3P-201ENST00000516699 LRP1Q07954 4544 aaKnown RBP1.51□□□□□ -2.17
RNU4ATAC3P-201ENST00000516699 FAT3Q8TDW7 4589 aa1.51□□□□□ -2.17
RNU4ATAC3P-201ENST00000516699 RYR2Q92736 4967 aa1.51□□□□□ -2.17
RNU4ATAC3P-201ENST00000516699 KRTAP19-4Q3LI73 84 aa1.5□□□□□ -2.17
RNU4ATAC3P-201ENST00000516699 RYR1P21817 5038 aa1.47□□□□□ -2.17
RNU4ATAC3P-201ENST00000516699 KRTAP19-2Q3LHN2 52 aa1.47□□□□□ -2.17
RNU4ATAC3P-201ENST00000516699 SPRR2GQ9BYE4 73 aa1.47□□□□□ -2.17
RNU4ATAC3P-201ENST00000516699 SPRR5A0A1B0GTR4 108 aa1.46□□□□□ -2.18
RNU4ATAC3P-201ENST00000516699 KRTAP4-1Q9BYQ7 146 aa1.45□□□□□ -2.18
RNU4ATAC3P-201ENST00000516699 MYCBP2O75592 4640 aa1.44□□□□□ -2.18
RNU4ATAC3P-201ENST00000516699 M0R2T5 61 aa1.44□□□□□ -2.18
RNU4ATAC3P-201ENST00000516699 PRO2289Q9P1D8 64 aa1.43□□□□□ -2.18
RNU4ATAC3P-201ENST00000516699 INE1O15225 51 aa1.42□□□□□ -2.18
RNU4ATAC3P-201ENST00000516699 KMT2CQ8NEZ4 4911 aaKnown RBP1.42□□□□□ -2.18
RNU4ATAC3P-201ENST00000516699 LRP2P98164 4655 aa1.41□□□□□ -2.18
RNU4ATAC3P-201ENST00000516699 KIAA1109Q2LD37 5005 aa1.4□□□□□ -2.18
RNU4ATAC3P-201ENST00000516699 RYR3Q15413 4870 aa1.4□□□□□ -2.19
RNU4ATAC3P-201ENST00000516699 KRTAP10-10P60014 251 aa1.39□□□□□ -2.19
RNU4ATAC3P-201ENST00000516699 KRTAP19-8Q3LI54 63 aa1.39□□□□□ -2.19
RNU4ATAC3P-201ENST00000516699 KRTAP8-1Q8IUC2 63 aa1.39□□□□□ -2.19
RNU4ATAC3P-201ENST00000516699 MUC17Q685J3 4493 aa1.38□□□□□ -2.19
RNU4ATAC3P-201ENST00000516699 FLGP20930 4061 aaPredicted RBP1.38□□□□□ -2.19
RNU4ATAC3P-201ENST00000516699 KRTAP10-12P60413 245 aa1.37□□□□□ -2.19
RNU4ATAC3P-201ENST00000516699 MT1HP80294 61 aa1.37□□□□□ -2.19
RNU4ATAC3P-201ENST00000516699 LCE3AQ5TA76 89 aa1.37□□□□□ -2.19
RNU4ATAC3P-201ENST00000516699 LPAP08519 4548 aa1.37□□□□□ -2.19
RNU4ATAC3P-201ENST00000516699 UBR4Q5T4S7 5183 aa1.36□□□□□ -2.19
RNU4ATAC3P-201ENST00000516699 ABCA13Q86UQ4 5058 aa1.36□□□□□ -2.19
RNU4ATAC3P-201ENST00000516699 MT2AP02795 61 aa1.35□□□□□ -2.19
RNU4ATAC3P-201ENST00000516699 KRTAP12-3P60328 96 aa1.35□□□□□ -2.19
RNU4ATAC3P-201ENST00000516699 MT1FP04733 61 aa1.34□□□□□ -2.19
RNU4ATAC3P-201ENST00000516699 PCLOQ9Y6V0 5065 aa1.34□□□□□ -2.2
RNU4ATAC3P-201ENST00000516699 KRTAP10-5P60370 271 aa1.32□□□□□ -2.2
RNU4ATAC3P-201ENST00000516699 BIRC6Q9NR09 4857 aa1.31□□□□□ -2.2
RNU4ATAC3P-201ENST00000516699 MT1XP80297 61 aa1.31□□□□□ -2.2
RNU4ATAC3P-201ENST00000516699 MT1BP07438 61 aa1.3□□□□□ -2.2
RNU4ATAC3P-201ENST00000516699 EPPK1P58107 5090 aaKnown RBP1.3□□□□□ -2.2
RNU4ATAC3P-201ENST00000516699 HERC1Q15751 4861 aa1.29□□□□□ -2.2
RNU4ATAC3P-201ENST00000516699 LCE3CQ5T5A8 94 aa1.27□□□□□ -2.21
RNU4ATAC3P-201ENST00000516699 HERC2O95714 4834 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms