RNA–Protein interactions for RNA: ENST00000516309.1

RNU6ATAC39P-201, Transcript of RNA, U6atac small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6ATAC39P, Length 149 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC39P-201ENST00000516309 NBEAQ8NFP9 2946 aa1.11□□□□□ -2.23
RNU6ATAC39P-201ENST00000516309 ZANQ9Y493 2812 aa1.11□□□□□ -2.23
RNU6ATAC39P-201ENST00000516309 A0A096LNI7 61 aa1.11□□□□□ -2.23
RNU6ATAC39P-201ENST00000516309 KRTAP6-2Q3LI66 62 aa1.11□□□□□ -2.23
RNU6ATAC39P-201ENST00000516309 CEP250Q9BV73 2442 aa1.09□□□□□ -2.24
RNU6ATAC39P-201ENST00000516309 DNAH9Q9NYC9 4486 aa1.09□□□□□ -2.24
RNU6ATAC39P-201ENST00000516309 DEFB124Q8NES8 71 aa1.07□□□□□ -2.24
RNU6ATAC39P-201ENST00000516309 TEP1Q99973 2627 aaKnown RBP1.07□□□□□ -2.24
RNU6ATAC39P-201ENST00000516309 TGP01266 2768 aa1.07□□□□□ -2.24
RNU6ATAC39P-201ENST00000516309 IGSF10Q6WRI0 2623 aa1.06□□□□□ -2.24
RNU6ATAC39P-201ENST00000516309 AKAP9Q99996 3911 aa1.06□□□□□ -2.24
RNU6ATAC39P-201ENST00000516309 KALRNO60229 2985 aa1.06□□□□□ -2.24
RNU6ATAC39P-201ENST00000516309 FASNP49327 2511 aaKnown RBP1.06□□□□□ -2.24
RNU6ATAC39P-201ENST00000516309 MYO18BQ8IUG5 2567 aa1.05□□□□□ -2.24
RNU6ATAC39P-201ENST00000516309 SPTBN5Q9NRC6 3674 aaKnown RBP1.04□□□□□ -2.24
RNU6ATAC39P-201ENST00000516309 TENM3Q9P273 2699 aa1.04□□□□□ -2.24
RNU6ATAC39P-201ENST00000516309 APELAP0DMC3 54 aa1.04□□□□□ -2.24
RNU6ATAC39P-201ENST00000516309 RELNP78509 3460 aa1.04□□□□□ -2.24
RNU6ATAC39P-201ENST00000516309 SMR3BP02814 79 aaPredicted RBP1.03□□□□□ -2.24
RNU6ATAC39P-201ENST00000516309 APOBP04114 4563 aaKnown RBP1.03□□□□□ -2.25
RNU6ATAC39P-201ENST00000516309 USP9XQ93008 2570 aaPredicted RBP1.02□□□□□ -2.25
RNU6ATAC39P-201ENST00000516309 KRTAP19-5Q3LI72 72 aa1.02□□□□□ -2.25
RNU6ATAC39P-201ENST00000516309 PKHD1P08F94 4074 aa1.01□□□□□ -2.25
RNU6ATAC39P-201ENST00000516309 SPRR2EP22531 72 aa1□□□□□ -2.25
RNU6ATAC39P-201ENST00000516309 DEFB136Q30KP8 78 aa1□□□□□ -2.25
RNU6ATAC39P-201ENST00000516309 SPRR2FQ96RM1 72 aa1□□□□□ -2.25
RNU6ATAC39P-201ENST00000516309 DNAH1Q9P2D7 4330 aa1□□□□□ -2.25
RNU6ATAC39P-201ENST00000516309 DEFB1P60022 68 aa0.99□□□□□ -2.25
RNU6ATAC39P-201ENST00000516309 CFAP54Q96N23 3096 aa0.99□□□□□ -2.25
RNU6ATAC39P-201ENST00000516309 ITPR1Q14643 2758 aa0.98□□□□□ -2.25
RNU6ATAC39P-201ENST00000516309 FAT3Q8TDW7 4589 aa0.98□□□□□ -2.25
RNU6ATAC39P-201ENST00000516309 HTTP42858 3142 aa0.97□□□□□ -2.25
RNU6ATAC39P-201ENST00000516309 HTN1P15515 57 aa0.97□□□□□ -2.25
RNU6ATAC39P-201ENST00000516309 COL6A3P12111 3177 aa0.97□□□□□ -2.25
RNU6ATAC39P-201ENST00000516309 TRIOO75962 3097 aa0.96□□□□□ -2.26
RNU6ATAC39P-201ENST00000516309 MXRA5Q9NR99 2828 aa0.96□□□□□ -2.26
RNU6ATAC39P-201ENST00000516309 DNAH10Q8IVF4 4471 aa0.95□□□□□ -2.26
RNU6ATAC39P-201ENST00000516309 CSMD1Q96PZ7 3565 aa0.95□□□□□ -2.26
RNU6ATAC39P-201ENST00000516309 DMXL2Q8TDJ6 3036 aa0.95□□□□□ -2.26
RNU6ATAC39P-201ENST00000516309 LRP1BQ9NZR2 4599 aa0.95□□□□□ -2.26
RNU6ATAC39P-201ENST00000516309 MAST4O15021 2626 aa0.95□□□□□ -2.26
RNU6ATAC39P-201ENST00000516309 MGAM2Q2M2H8 2515 aa0.94□□□□□ -2.26
RNU6ATAC39P-201ENST00000516309 SVEP1Q4LDE5 3571 aa0.93□□□□□ -2.26
RNU6ATAC39P-201ENST00000516309 CMYA5Q8N3K9 4069 aa0.92□□□□□ -2.26
RNU6ATAC39P-201ENST00000516309 LAMA3Q16787 3333 aa0.92□□□□□ -2.26
RNU6ATAC39P-201ENST00000516309 WDR87Q6ZQQ6 2873 aa0.9□□□□□ -2.26
RNU6ATAC39P-201ENST00000516309 LAMA1P25391 3075 aa0.9□□□□□ -2.26
RNU6ATAC39P-201ENST00000516309 FLNAP21333 2647 aaKnown RBP0.9□□□□□ -2.26
RNU6ATAC39P-201ENST00000516309 DEFB133Q30KQ1 61 aa0.89□□□□□ -2.27
RNU6ATAC39P-201ENST00000516309 AHNAK2Q8IVF2 5795 aa0.88□□□□□ -2.27
RNU6ATAC39P-201ENST00000516309 FAT1Q14517 4588 aa0.88□□□□□ -2.27
RNU6ATAC39P-201ENST00000516309 PLECQ15149 4684 aaKnown RBP0.87□□□□□ -2.27
RNU6ATAC39P-201ENST00000516309 NIPBLQ6KC79 2804 aaeCLIP0.87□□□□□ -2.27
RNU6ATAC39P-201ENST00000516309 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
RNU6ATAC39P-201ENST00000516309 SPTAN1Q13813 2472 aaKnown RBP0.86□□□□□ -2.27
RNU6ATAC39P-201ENST00000516309 LRBAP50851 2863 aa0.84□□□□□ -2.27
RNU6ATAC39P-201ENST00000516309 ATMQ13315 3056 aa0.84□□□□□ -2.28
RNU6ATAC39P-201ENST00000516309 FAT4Q6V0I7 4981 aa0.84□□□□□ -2.28
RNU6ATAC39P-201ENST00000516309 MAP1AP78559 2803 aaPredicted RBP0.83□□□□□ -2.28
RNU6ATAC39P-201ENST00000516309 FRYLO94915 3013 aa0.83□□□□□ -2.28
RNU6ATAC39P-201ENST00000516309 TEX15Q9BXT5 2789 aa0.82□□□□□ -2.28
RNU6ATAC39P-201ENST00000516309 RPS29P62273 56 aaKnown RBP0.82□□□□□ -2.28
RNU6ATAC39P-201ENST00000516309 HMCN2Q8NDA2 5059 aa0.81□□□□□ -2.28
RNU6ATAC39P-201ENST00000516309 DOPEY1Q5JWR5 2465 aa0.81□□□□□ -2.28
RNU6ATAC39P-201ENST00000516309 ADGRG4Q8IZF6 3080 aa0.81□□□□□ -2.28
RNU6ATAC39P-201ENST00000516309 SMG1Q96Q15 3661 aaKnown RBP0.81□□□□□ -2.28
RNU6ATAC39P-201ENST00000516309 TRRAPQ9Y4A5 3859 aa0.8□□□□□ -2.28
RNU6ATAC39P-201ENST00000516309 KRTAP5-10Q6L8G5 202 aa0.79□□□□□ -2.28
RNU6ATAC39P-201ENST00000516309 PRUNE2Q8WUY3 3088 aa0.78□□□□□ -2.28
RNU6ATAC39P-201ENST00000516309 NBEAL1Q6ZS30 2694 aa0.78□□□□□ -2.29
RNU6ATAC39P-201ENST00000516309 STAB2Q8WWQ8 2551 aa0.77□□□□□ -2.29
RNU6ATAC39P-201ENST00000516309 CFAP46Q8IYW2 2715 aa0.74□□□□□ -2.29
RNU6ATAC39P-201ENST00000516309 C5orf42Q9H799 3197 aa0.72□□□□□ -2.29
RNU6ATAC39P-201ENST00000516309 HERC1Q15751 4861 aa0.71□□□□□ -2.3
RNU6ATAC39P-201ENST00000516309 PHGR1C9JFL3 82 aa0.69□□□□□ -2.3
RNU6ATAC39P-201ENST00000516309 ITPR2Q14571 2701 aa0.68□□□□□ -2.3
RNU6ATAC39P-201ENST00000516309 DNAH5Q8TE73 4624 aa0.68□□□□□ -2.3
RNU6ATAC39P-201ENST00000516309 LINC01556Q5JQF7 62 aa0.68□□□□□ -2.3
RNU6ATAC39P-201ENST00000516309 LRP2P98164 4655 aa0.68□□□□□ -2.3
RNU6ATAC39P-201ENST00000516309 DNAH12Q6ZR08 3092 aa0.67□□□□□ -2.3
RNU6ATAC39P-201ENST00000516309 DYNC1H1Q14204 4646 aaKnown RBP0.66□□□□□ -2.3
RNU6ATAC39P-201ENST00000516309 CD52P31358 61 aa0.66□□□□□ -2.3
RNU6ATAC39P-201ENST00000516309 MT1HP80294 61 aa0.66□□□□□ -2.3
RNU6ATAC39P-201ENST00000516309 SZT2Q5T011 3432 aa0.66□□□□□ -2.3
RNU6ATAC39P-201ENST00000516309 DMDP11532 3685 aa0.66□□□□□ -2.3
RNU6ATAC39P-201ENST00000516309 DNAH17Q9UFH2 4485 aa0.65□□□□□ -2.3
RNU6ATAC39P-201ENST00000516309 STATHP02808 62 aa0.65□□□□□ -2.31
RNU6ATAC39P-201ENST00000516309 A0A096LPF7 62 aa0.64□□□□□ -2.31
RNU6ATAC39P-201ENST00000516309 MT1EP04732 61 aa0.64□□□□□ -2.31
RNU6ATAC39P-201ENST00000516309 Q9Y3F1 56 aa0.64□□□□□ -2.31
RNU6ATAC39P-201ENST00000516309 TLN1Q9Y490 2541 aaKnown RBP0.61□□□□□ -2.31
RNU6ATAC39P-201ENST00000516309 CSMD2Q7Z408 3487 aa0.6□□□□□ -2.31
RNU6ATAC39P-201ENST00000516309 CEP295Q9C0D2 2601 aa0.6□□□□□ -2.31
RNU6ATAC39P-201ENST00000516309 FREM2Q5SZK8 3169 aa0.58□□□□□ -2.32
RNU6ATAC39P-201ENST00000516309 DEFB108BQ8NET1 73 aa0.58□□□□□ -2.32
RNU6ATAC39P-201ENST00000516309 XIRP2A4UGR9 3374 aa0.58□□□□□ -2.32
RNU6ATAC39P-201ENST00000516309 MUC17Q685J3 4493 aa0.57□□□□□ -2.32
RNU6ATAC39P-201ENST00000516309 VPS13CQ709C8 3753 aa0.56□□□□□ -2.32
RNU6ATAC39P-201ENST00000516309 MUC3AQ02505 3323 aa0.56□□□□□ -2.32
RNU6ATAC39P-201ENST00000516309 MT1LQ93083 61 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms