RNA–Protein interactions for RNA: ENST00000515708.5

TSPAN17-209, Transcript of tetraspanin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN17, Length 2,361 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-209ENST00000515708 LRP1Q07954 4544 aaKnown RBP8.76□□□□□ -1.01
TSPAN17-209ENST00000515708 FAT3Q8TDW7 4589 aa8.73□□□□□ -1.01
TSPAN17-209ENST00000515708 RYR1P21817 5038 aa8.7□□□□□ -1.02
TSPAN17-209ENST00000515708 KIAA1109Q2LD37 5005 aa8.69□□□□□ -1.02
TSPAN17-209ENST00000515708 K7ERS5 55 aa8.69□□□□□ -1.02
TSPAN17-209ENST00000515708 TNXBP22105 4242 aa8.68□□□□□ -1.02
TSPAN17-209ENST00000515708 KRTAP3-3Q9BYR6 98 aa8.67□□□□□ -1.02
TSPAN17-209ENST00000515708 EPPK1P58107 5090 aaKnown RBP8.67□□□□□ -1.02
TSPAN17-209ENST00000515708 KRTAP17-1Q9BYP8 105 aa8.65□□□□□ -1.02
TSPAN17-209ENST00000515708 DMBT1Q9UGM3 2413 aaPredicted RBP8.65□□□□□ -1.02
TSPAN17-209ENST00000515708 KRTAP10-6P60371 365 aaPredicted RBP8.64□□□□□ -1.03
TSPAN17-209ENST00000515708 KRTAP10-8P60410 259 aa8.64□□□□□ -1.03
TSPAN17-209ENST00000515708 RPL37P61927 97 aaKnown RBP8.64□□□□□ -1.03
TSPAN17-209ENST00000515708 Q5VSD8 79 aa8.61□□□□□ -1.03
TSPAN17-209ENST00000515708 MYCBP2O75592 4640 aa8.6□□□□□ -1.03
TSPAN17-209ENST00000515708 CRIPTQ9P021 101 aa8.6□□□□□ -1.03
TSPAN17-209ENST00000515708 XP32Q5T750 250 aa8.58□□□□□ -1.04
TSPAN17-209ENST00000515708 KRTAP13-4Q3LI77 160 aa8.57□□□□□ -1.04
TSPAN17-209ENST00000515708 KRTAP3-2Q9BYR7 98 aa8.57□□□□□ -1.04
TSPAN17-209ENST00000515708 S4R3F8 94 aa8.55□□□□□ -1.04
TSPAN17-209ENST00000515708 A0A0D9SG42 100 aa8.5□□□□□ -1.05
TSPAN17-209ENST00000515708 SPINT4Q6UDR6 99 aa8.5□□□□□ -1.05
TSPAN17-209ENST00000515708 NDUFAF8A1L188 74 aa8.44□□□□□ -1.06
TSPAN17-209ENST00000515708 A0A0A0MQY5 61 aa8.39□□□□□ -1.07
TSPAN17-209ENST00000515708 KRTAP15-1Q3LI76 137 aa8.37□□□□□ -1.07
TSPAN17-209ENST00000515708 MT1HL1P0DM35 61 aa8.34□□□□□ -1.07
TSPAN17-209ENST00000515708 TPRXLQ17RH7 258 aa8.33□□□□□ -1.08
TSPAN17-209ENST00000515708 KRTAP12-2P59991 146 aa8.3□□□□□ -1.08
TSPAN17-209ENST00000515708 KRTAP4-5Q9BYR2 181 aa8.3□□□□□ -1.08
TSPAN17-209ENST00000515708 LPAP08519 4548 aa8.29□□□□□ -1.08
TSPAN17-209ENST00000515708 ABCA13Q86UQ4 5058 aa8.26□□□□□ -1.09
TSPAN17-209ENST00000515708 C10orf95Q9H7T3 257 aa8.24□□□□□ -1.09
TSPAN17-209ENST00000515708 LRP2P98164 4655 aa8.24□□□□□ -1.09
TSPAN17-209ENST00000515708 KRTAP12-1P59990 96 aa8.24□□□□□ -1.09
TSPAN17-209ENST00000515708 M0QZ58 72 aa8.17□□□□□ -1.1
TSPAN17-209ENST00000515708 HERC2O95714 4834 aa8.14□□□□□ -1.11
TSPAN17-209ENST00000515708 BIRC6Q9NR09 4857 aa8.06□□□□□ -1.12
TSPAN17-209ENST00000515708 LUZP6Q538Z0 58 aa7.99□□□□□ -1.13
TSPAN17-209ENST00000515708 R4GN34 69 aa7.95□□□□□ -1.14
TSPAN17-209ENST00000515708 J3QL48 77 aa7.9□□□□□ -1.15
TSPAN17-209ENST00000515708 SEC61BP60468 96 aaKnown RBP7.87□□□□□ -1.15
TSPAN17-209ENST00000515708 MUC17Q685J3 4493 aa7.87□□□□□ -1.15
TSPAN17-209ENST00000515708 PCLOQ9Y6V0 5065 aa7.87□□□□□ -1.15
TSPAN17-209ENST00000515708 LORP23490 312 aaPredicted RBP7.84□□□□□ -1.15
TSPAN17-209ENST00000515708 HERC1Q15751 4861 aa7.82□□□□□ -1.16
TSPAN17-209ENST00000515708 KRTAP4-1Q9BYQ7 146 aa7.8□□□□□ -1.16
TSPAN17-209ENST00000515708 MUC2Q02817 5179 aa7.76□□□□□ -1.17
TSPAN17-209ENST00000515708 KRTAP19-2Q3LHN2 52 aa7.7□□□□□ -1.18
TSPAN17-209ENST00000515708 PLAC4Q8WY50 150 aa7.67□□□□□ -1.18
TSPAN17-209ENST00000515708 HMCN2Q8NDA2 5059 aa7.64□□□□□ -1.19
TSPAN17-209ENST00000515708 CAMK2N1Q7Z7J9 78 aa7.55□□□□□ -1.2
TSPAN17-209ENST00000515708 PP632Q6XCG6 107 aa7.5□□□□□ -1.21
TSPAN17-209ENST00000515708 FLGP20930 4061 aaPredicted RBP7.48□□□□□ -1.21
TSPAN17-209ENST00000515708 UBR4Q5T4S7 5183 aa7.41□□□□□ -1.22
TSPAN17-209ENST00000515708 RNF213Q63HN8 5207 aa7.38□□□□□ -1.23
TSPAN17-209ENST00000515708 FAT4Q6V0I7 4981 aa7.38□□□□□ -1.23
TSPAN17-209ENST00000515708 TNP1P09430 55 aa7.29□□□□□ -1.24
TSPAN17-209ENST00000515708 KRTAP23-1A1A580 65 aa7.23□□□□□ -1.25
TSPAN17-209ENST00000515708 LCE2CQ5TA81 110 aa7.18□□□□□ -1.26
TSPAN17-209ENST00000515708 SPRR2GQ9BYE4 73 aa7.13□□□□□ -1.27
TSPAN17-209ENST00000515708 KRTAP19-1Q8IUB9 90 aa7.09□□□□□ -1.27
TSPAN17-209ENST00000515708 SPRR5A0A1B0GTR4 108 aa7.06□□□□□ -1.28
TSPAN17-209ENST00000515708 PRO2289Q9P1D8 64 aa7.02□□□□□ -1.29
TSPAN17-209ENST00000515708 MT1HP80294 61 aa7□□□□□ -1.29
TSPAN17-209ENST00000515708 M0R2T5 61 aa6.99□□□□□ -1.29
TSPAN17-209ENST00000515708 MT1FP04733 61 aa6.9□□□□□ -1.31
TSPAN17-209ENST00000515708 LCE3AQ5TA76 89 aa6.9□□□□□ -1.31
TSPAN17-209ENST00000515708 MT2AP02795 61 aa6.89□□□□□ -1.31
TSPAN17-209ENST00000515708 KRTAP10-10P60014 251 aa6.88□□□□□ -1.31
TSPAN17-209ENST00000515708 KRTAP9-8Q9BYQ0 159 aa6.83□□□□□ -1.32
TSPAN17-209ENST00000515708 INE1O15225 51 aa6.8□□□□□ -1.32
TSPAN17-209ENST00000515708 KRTAP19-8Q3LI54 63 aa6.79□□□□□ -1.32
TSPAN17-209ENST00000515708 KRTAP8-1Q8IUC2 63 aa6.74□□□□□ -1.33
TSPAN17-209ENST00000515708 MT1BP07438 61 aa6.7□□□□□ -1.34
TSPAN17-209ENST00000515708 KRTAP10-5P60370 271 aa6.7□□□□□ -1.34
TSPAN17-209ENST00000515708 MT1XP80297 61 aa6.68□□□□□ -1.34
TSPAN17-209ENST00000515708 KRTAP10-12P60413 245 aa6.59□□□□□ -1.35
TSPAN17-209ENST00000515708 KRTAP12-3P60328 96 aa6.57□□□□□ -1.36
TSPAN17-209ENST00000515708 KRTAP9-3Q9BYQ3 159 aa6.53□□□□□ -1.36
TSPAN17-209ENST00000515708 KRTAP10-7P60409 375 aaPredicted RBP6.51□□□□□ -1.37
TSPAN17-209ENST00000515708 LCE2AQ5TA79 106 aaPredicted RBP6.51□□□□□ -1.37
TSPAN17-209ENST00000515708 USH2AO75445 5202 aa6.45□□□□□ -1.38
TSPAN17-209ENST00000515708 LCE2BO14633 110 aa6.35□□□□□ -1.39
TSPAN17-209ENST00000515708 KRTAP19-5Q3LI72 72 aa6.25□□□□□ -1.41
TSPAN17-209ENST00000515708 LCE3CQ5T5A8 94 aa6.19□□□□□ -1.42
TSPAN17-209ENST00000515708 KMT2DO14686 5537 aa6.14□□□□□ -1.43
TSPAN17-209ENST00000515708 FSIP2Q5CZC0 6907 aa6.09□□□□□ -1.43
TSPAN17-209ENST00000515708 KRTAP4-8A0A0G2JLE6 195 aa6.08□□□□□ -1.44
TSPAN17-209ENST00000515708 KRTAP4-8Q9BYQ9 185 aa6.08□□□□□ -1.44
TSPAN17-209ENST00000515708 SSPOA2VEC9 5147 aa6.02□□□□□ -1.45
TSPAN17-209ENST00000515708 KRTAP9-6A8MVA2 160 aa6□□□□□ -1.45
TSPAN17-209ENST00000515708 KRTAP19-7Q3SYF9 63 aa5.96□□□□□ -1.45
TSPAN17-209ENST00000515708 KRTAP4-7Q9BYR0 210 aa5.87□□□□□ -1.47
TSPAN17-209ENST00000515708 KRTAP2-3P0C7H8 128 aa5.82□□□□□ -1.48
TSPAN17-209ENST00000515708 KRTAP2-4Q9BYR9 128 aa5.82□□□□□ -1.48
TSPAN17-209ENST00000515708 KRTAP2-1Q9BYU5 128 aa5.82□□□□□ -1.48
TSPAN17-209ENST00000515708 KRTAP19-4Q3LI73 84 aa5.8□□□□□ -1.48
TSPAN17-209ENST00000515708 MT1LQ93083 61 aa5.79□□□□□ -1.48
TSPAN17-209ENST00000515708 KRTAP19-6Q3LI70 58 aa5.78□□□□□ -1.48
TSPAN17-209ENST00000515708 MT1EP04732 61 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms