RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 MT1HL1P0DM35 61 aa6.78□□□□□ -1.32
TRIO-222ENST00000515144 CRCT1Q9UGL9 99 aa6.78□□□□□ -1.32
TRIO-222ENST00000515144 KRTAP3-1Q9BYR8 98 aa6.76□□□□□ -1.33
TRIO-222ENST00000515144 KRTAP12-1P59990 96 aa6.75□□□□□ -1.33
TRIO-222ENST00000515144 DNAH7Q8WXX0 4024 aa6.74□□□□□ -1.33
TRIO-222ENST00000515144 KRTAP13-4Q3LI77 160 aa6.71□□□□□ -1.33
TRIO-222ENST00000515144 DNAH2Q9P225 4427 aa6.71□□□□□ -1.34
TRIO-222ENST00000515144 KRTAP15-1Q3LI76 137 aa6.7□□□□□ -1.34
TRIO-222ENST00000515144 DNAH6Q9C0G6 4158 aa6.58□□□□□ -1.36
TRIO-222ENST00000515144 HECTD4Q9Y4D8 3996 aa6.54□□□□□ -1.36
TRIO-222ENST00000515144 FAT2Q9NYQ8 4349 aa6.51□□□□□ -1.37
TRIO-222ENST00000515144 KRTAP10-6P60371 365 aaPredicted RBP6.51□□□□□ -1.37
TRIO-222ENST00000515144 KRTAP10-4P60372 401 aaPredicted RBP6.47□□□□□ -1.37
TRIO-222ENST00000515144 KRTAP10-12P60413 245 aa6.45□□□□□ -1.38
TRIO-222ENST00000515144 STARD9Q9P2P6 4700 aa6.44□□□□□ -1.38
TRIO-222ENST00000515144 PLECQ15149 4684 aaKnown RBP6.44□□□□□ -1.38
TRIO-222ENST00000515144 LORP23490 312 aaPredicted RBP6.4□□□□□ -1.39
TRIO-222ENST00000515144 DNAH11Q96DT5 4516 aa6.36□□□□□ -1.39
TRIO-222ENST00000515144 KRTAP3-3Q9BYR6 98 aa6.35□□□□□ -1.39
TRIO-222ENST00000515144 VPS13DQ5THJ4 4388 aa6.32□□□□□ -1.4
TRIO-222ENST00000515144 DYNC2H1Q8NCM8 4307 aaKnown RBP6.29□□□□□ -1.4
TRIO-222ENST00000515144 DNAH17Q9UFH2 4485 aa6.26□□□□□ -1.41
TRIO-222ENST00000515144 KRTAP10-7P60409 375 aaPredicted RBP6.25□□□□□ -1.41
TRIO-222ENST00000515144 KRTAP3-2Q9BYR7 98 aa6.21□□□□□ -1.41
TRIO-222ENST00000515144 PKHD1P08F94 4074 aa6.21□□□□□ -1.42
TRIO-222ENST00000515144 KRTAP8-1Q8IUC2 63 aa6.2□□□□□ -1.42
TRIO-222ENST00000515144 LCE3AQ5TA76 89 aa6.19□□□□□ -1.42
TRIO-222ENST00000515144 LRP1BQ9NZR2 4599 aa6.16□□□□□ -1.42
TRIO-222ENST00000515144 KRTAP12-3P60328 96 aa6.14□□□□□ -1.43
TRIO-222ENST00000515144 DNAH5Q8TE73 4624 aa6.13□□□□□ -1.43
TRIO-222ENST00000515144 KRTAP4-1Q9BYQ7 146 aa6.11□□□□□ -1.43
TRIO-222ENST00000515144 DNAH8Q96JB1 4490 aa6.1□□□□□ -1.43
TRIO-222ENST00000515144 MT1HP80294 61 aa6.06□□□□□ -1.44
TRIO-222ENST00000515144 FAT1Q14517 4588 aa5.97□□□□□ -1.45
TRIO-222ENST00000515144 KRTAP10-5P60370 271 aa5.93□□□□□ -1.46
TRIO-222ENST00000515144 FAT3Q8TDW7 4589 aa5.92□□□□□ -1.46
TRIO-222ENST00000515144 SPRR2FQ96RM1 72 aa5.88□□□□□ -1.47
TRIO-222ENST00000515144 HSPG2P98160 4391 aa5.85□□□□□ -1.47
TRIO-222ENST00000515144 DNHD1Q96M86 4753 aa5.84□□□□□ -1.47
TRIO-222ENST00000515144 LPAP08519 4548 aa5.83□□□□□ -1.48
TRIO-222ENST00000515144 MT2AP02795 61 aa5.81□□□□□ -1.48
TRIO-222ENST00000515144 SACSQ9NZJ4 4579 aa5.77□□□□□ -1.49
TRIO-222ENST00000515144 MT1FP04733 61 aa5.75□□□□□ -1.49
TRIO-222ENST00000515144 PKD1P98161 4303 aa5.74□□□□□ -1.49
TRIO-222ENST00000515144 SPRR5A0A1B0GTR4 108 aa5.72□□□□□ -1.49
TRIO-222ENST00000515144 PKHD1L1Q86WI1 4243 aa5.72□□□□□ -1.49
TRIO-222ENST00000515144 DYNC1H1Q14204 4646 aaKnown RBP5.72□□□□□ -1.49
TRIO-222ENST00000515144 LRP1Q07954 4544 aaKnown RBP5.7□□□□□ -1.5
TRIO-222ENST00000515144 KRTAP17-1Q9BYP8 105 aa5.68□□□□□ -1.5
TRIO-222ENST00000515144 TNXBP22105 4242 aa5.67□□□□□ -1.5
TRIO-222ENST00000515144 APOBP04114 4563 aaKnown RBP5.67□□□□□ -1.5
TRIO-222ENST00000515144 MYCBP2O75592 4640 aa5.64□□□□□ -1.51
TRIO-222ENST00000515144 FLGP20930 4061 aaPredicted RBP5.63□□□□□ -1.51
TRIO-222ENST00000515144 INE1O15225 51 aa5.63□□□□□ -1.51
TRIO-222ENST00000515144 KRTAP19-5Q3LI72 72 aa5.63□□□□□ -1.51
TRIO-222ENST00000515144 SPRR2GQ9BYE4 73 aa5.61□□□□□ -1.51
TRIO-222ENST00000515144 SPRR2EP22531 72 aa5.61□□□□□ -1.51
TRIO-222ENST00000515144 SPRR2BP35325 72 aa5.61□□□□□ -1.51
TRIO-222ENST00000515144 SPRR2AP35326 72 aa5.61□□□□□ -1.51
TRIO-222ENST00000515144 KRTAP23-1A1A580 65 aa5.58□□□□□ -1.52
TRIO-222ENST00000515144 RYR1P21817 5038 aa5.42□□□□□ -1.54
TRIO-222ENST00000515144 SPRR2DP22532 72 aa5.39□□□□□ -1.55
TRIO-222ENST00000515144 LCE3CQ5T5A8 94 aa5.36□□□□□ -1.55
TRIO-222ENST00000515144 HYDINQ4G0P3 5121 aa5.35□□□□□ -1.55
TRIO-222ENST00000515144 LCE2BO14633 110 aa5.3□□□□□ -1.56
TRIO-222ENST00000515144 LCE3BQ5TA77 95 aa5.29□□□□□ -1.56
TRIO-222ENST00000515144 KRTAP19-1Q8IUB9 90 aa5.28□□□□□ -1.56
TRIO-222ENST00000515144 KRTAP4-8A0A0G2JLE6 195 aa5.25□□□□□ -1.57
TRIO-222ENST00000515144 KRTAP4-8Q9BYQ9 185 aa5.25□□□□□ -1.57
TRIO-222ENST00000515144 LRP2P98164 4655 aa5.24□□□□□ -1.57
TRIO-222ENST00000515144 MT1GP13640 62 aa5.22□□□□□ -1.57
TRIO-222ENST00000515144 KRTAP9-8Q9BYQ0 159 aa5.21□□□□□ -1.58
TRIO-222ENST00000515144 RYR3Q15413 4870 aa5.19□□□□□ -1.58
TRIO-222ENST00000515144 MT1XP80297 61 aa5.17□□□□□ -1.58
TRIO-222ENST00000515144 KRTAP19-8Q3LI54 63 aa5.09□□□□□ -1.59
TRIO-222ENST00000515144 MT1BP07438 61 aa5.07□□□□□ -1.6
TRIO-222ENST00000515144 KRTAP9-2Q9BYQ4 174 aa5.06□□□□□ -1.6
TRIO-222ENST00000515144 KRTAP12-4P60329 112 aa5.05□□□□□ -1.6
TRIO-222ENST00000515144 LCE2CQ5TA81 110 aa5.05□□□□□ -1.6
TRIO-222ENST00000515144 KRTAP9-3Q9BYQ3 159 aa5.04□□□□□ -1.6
TRIO-222ENST00000515144 MT4P47944 62 aa4.97□□□□□ -1.61
TRIO-222ENST00000515144 LCE2DQ5TA82 110 aaPredicted RBP4.92□□□□□ -1.62
TRIO-222ENST00000515144 KRTAP4-7Q9BYR0 210 aa4.87□□□□□ -1.63
TRIO-222ENST00000515144 KMT2CQ8NEZ4 4911 aaKnown RBP4.85□□□□□ -1.63
TRIO-222ENST00000515144 MUC17Q685J3 4493 aa4.83□□□□□ -1.64
TRIO-222ENST00000515144 KRTAP19-3Q7Z4W3 81 aa4.76□□□□□ -1.65
TRIO-222ENST00000515144 KRTAP9-6A0A140TA67 174 aa4.74□□□□□ -1.65
TRIO-222ENST00000515144 HERC2O95714 4834 aa4.73□□□□□ -1.65
TRIO-222ENST00000515144 LOC100996750A0A140TA64 210 aa4.7□□□□□ -1.66
TRIO-222ENST00000515144 KRTAP19-4Q3LI73 84 aa4.68□□□□□ -1.66
TRIO-222ENST00000515144 LCE3DQ9BYE3 92 aa4.68□□□□□ -1.66
TRIO-222ENST00000515144 KRTAP19-2Q3LHN2 52 aa4.68□□□□□ -1.66
TRIO-222ENST00000515144 SYNE2Q8WXH0 6885 aaKnown RBP4.67□□□□□ -1.66
TRIO-222ENST00000515144 KRTAP4-3Q9BYR4 195 aa4.67□□□□□ -1.66
TRIO-222ENST00000515144 KIAA1109Q2LD37 5005 aa4.65□□□□□ -1.66
TRIO-222ENST00000515144 MT1LQ93083 61 aa4.64□□□□□ -1.67
TRIO-222ENST00000515144 MT1EP04732 61 aa4.63□□□□□ -1.67
TRIO-222ENST00000515144 RYR2Q92736 4967 aa4.58□□□□□ -1.68
TRIO-222ENST00000515144 KRTAP19-6Q3LI70 58 aa4.56□□□□□ -1.68
TRIO-222ENST00000515144 LCE1BQ5T7P3 118 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms