RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 BRCA2P51587 3418 aa0.35□□□□□ -2.35
LDHBP3-201ENST00000514909 ABCA5Q8WWZ7 1642 aa0.35□□□□□ -2.35
LDHBP3-201ENST00000514909 FAT3Q8TDW7 4589 aa0.35□□□□□ -2.35
LDHBP3-201ENST00000514909 VPS13BQ7Z7G8 4022 aa0.35□□□□□ -2.35
LDHBP3-201ENST00000514909 MAP1AP78559 2803 aaPredicted RBP0.34□□□□□ -2.35
LDHBP3-201ENST00000514909 ABCC8Q09428 1581 aa0.34□□□□□ -2.36
LDHBP3-201ENST00000514909 FREM2Q5SZK8 3169 aa0.34□□□□□ -2.36
LDHBP3-201ENST00000514909 NBPF19A0A087WUL8 3843 aa0.33□□□□□ -2.36
LDHBP3-201ENST00000514909 NRXN3Q9Y4C0 1643 aa0.33□□□□□ -2.36
LDHBP3-201ENST00000514909 ASPMQ8IZT6 3477 aa0.33□□□□□ -2.36
LDHBP3-201ENST00000514909 CMC2Q9NRP2 79 aa0.32□□□□□ -2.36
LDHBP3-201ENST00000514909 DMXL2Q8TDJ6 3036 aa0.32□□□□□ -2.36
LDHBP3-201ENST00000514909 LOC400499M0QZD8 3231 aa0.31□□□□□ -2.36
LDHBP3-201ENST00000514909 LAMA1P25391 3075 aa0.3□□□□□ -2.36
LDHBP3-201ENST00000514909 USP34Q70CQ2 3546 aa0.3□□□□□ -2.36
LDHBP3-201ENST00000514909 LRP2P98164 4655 aa0.3□□□□□ -2.36
LDHBP3-201ENST00000514909 EFCAB6Q5THR3 1501 aa0.29□□□□□ -2.36
LDHBP3-201ENST00000514909 PKHD1P08F94 4074 aa0.29□□□□□ -2.36
LDHBP3-201ENST00000514909 SVEP1Q4LDE5 3571 aa0.29□□□□□ -2.36
LDHBP3-201ENST00000514909 TACC2O95359 2948 aa0.29□□□□□ -2.36
LDHBP3-201ENST00000514909 CFAP54Q96N23 3096 aa0.28□□□□□ -2.36
LDHBP3-201ENST00000514909 SRRM2Q9UQ35 2752 aaKnown RBP0.28□□□□□ -2.36
LDHBP3-201ENST00000514909 SPRR2AP35326 72 aa0.28□□□□□ -2.36
LDHBP3-201ENST00000514909 NF1P21359 2839 aa0.28□□□□□ -2.37
LDHBP3-201ENST00000514909 CUBNO60494 3623 aa0.27□□□□□ -2.37
LDHBP3-201ENST00000514909 H3BNG1 76 aa0.26□□□□□ -2.37
LDHBP3-201ENST00000514909 CSMD2Q7Z408 3487 aa0.26□□□□□ -2.37
LDHBP3-201ENST00000514909 WDFY3Q8IZQ1 3526 aa0.25□□□□□ -2.37
LDHBP3-201ENST00000514909 HTTP42858 3142 aa0.25□□□□□ -2.37
LDHBP3-201ENST00000514909 SNRPGP15A8MWD9 76 aa0.25□□□□□ -2.37
LDHBP3-201ENST00000514909 SPTBN5Q9NRC6 3674 aaKnown RBP0.25□□□□□ -2.37
LDHBP3-201ENST00000514909 UTRNP46939 3433 aa0.25□□□□□ -2.37
LDHBP3-201ENST00000514909 LMO7Q8WWI1 1683 aa0.24□□□□□ -2.37
LDHBP3-201ENST00000514909 MGAQ8IWI9 3026 aa0.24□□□□□ -2.37
LDHBP3-201ENST00000514909 CENPEQ02224 2701 aa0.24□□□□□ -2.37
LDHBP3-201ENST00000514909 FRYLO94915 3013 aa0.24□□□□□ -2.37
LDHBP3-201ENST00000514909 IGLV5-48A0A075B6I7 105 aa0.23□□□□□ -2.37
LDHBP3-201ENST00000514909 A0A1B0GUL6 1792 aa0.23□□□□□ -2.37
LDHBP3-201ENST00000514909 LAMA5O15230 3695 aa0.23□□□□□ -2.37
LDHBP3-201ENST00000514909 VPS13AQ96RL7 3174 aa0.22□□□□□ -2.37
LDHBP3-201ENST00000514909 KRTAP6-2Q3LI66 62 aa0.22□□□□□ -2.37
LDHBP3-201ENST00000514909 NOP10Q9NPE3 64 aaKnown RBP0.22□□□□□ -2.37
LDHBP3-201ENST00000514909 ADGRG4Q8IZF6 3080 aa0.22□□□□□ -2.37
LDHBP3-201ENST00000514909 DMXL1Q9Y485 3027 aa0.21□□□□□ -2.38
LDHBP3-201ENST00000514909 MYO15AQ9UKN7 3530 aa0.2□□□□□ -2.38
LDHBP3-201ENST00000514909 SPRR2GQ9BYE4 73 aa0.2□□□□□ -2.38
LDHBP3-201ENST00000514909 ABRACLQ9P1F3 81 aa0.2□□□□□ -2.38
LDHBP3-201ENST00000514909 FLGP20930 4061 aaPredicted RBP0.19□□□□□ -2.38
LDHBP3-201ENST00000514909 KIF21BO75037 1637 aa0.19□□□□□ -2.38
LDHBP3-201ENST00000514909 SACSQ9NZJ4 4579 aa0.18□□□□□ -2.38
LDHBP3-201ENST00000514909 DNAH14Q0VDD8 3507 aa0.18□□□□□ -2.38
LDHBP3-201ENST00000514909 DNAH3Q8TD57 4116 aa0.16□□□□□ -2.38
LDHBP3-201ENST00000514909 FRYQ5TBA9 3013 aa0.16□□□□□ -2.38
LDHBP3-201ENST00000514909 SMIM27A0A1W2PRY6 76 aa0.16□□□□□ -2.38
LDHBP3-201ENST00000514909 VPS13CQ709C8 3753 aa0.16□□□□□ -2.38
LDHBP3-201ENST00000514909 ZZEF1O43149 2961 aa0.16□□□□□ -2.38
LDHBP3-201ENST00000514909 DNAH9Q9NYC9 4486 aa0.15□□□□□ -2.38
LDHBP3-201ENST00000514909 DNAH7Q8WXX0 4024 aa0.15□□□□□ -2.39
LDHBP3-201ENST00000514909 PRUNE2Q8WUY3 3088 aa0.15□□□□□ -2.39
LDHBP3-201ENST00000514909 STARD9Q9P2P6 4700 aa0.14□□□□□ -2.39
LDHBP3-201ENST00000514909 ATMQ13315 3056 aa0.13□□□□□ -2.39
LDHBP3-201ENST00000514909 PKHD1L1Q86WI1 4243 aa0.13□□□□□ -2.39
LDHBP3-201ENST00000514909 TRIOO75962 3097 aa0.12□□□□□ -2.39
LDHBP3-201ENST00000514909 LINC01546A6NGU7 62 aa0.12□□□□□ -2.39
LDHBP3-201ENST00000514909 KAAG1Q9UBP8 84 aa0.12□□□□□ -2.39
LDHBP3-201ENST00000514909 ANK3Q12955 4377 aaKnown RBP0.12□□□□□ -2.39
LDHBP3-201ENST00000514909 CHD7Q9P2D1 2997 aa0.12□□□□□ -2.39
LDHBP3-201ENST00000514909 XIRP2A4UGR9 3374 aa0.11□□□□□ -2.39
LDHBP3-201ENST00000514909 CDH23Q9H251 3354 aa0.11□□□□□ -2.39
LDHBP3-201ENST00000514909 SPENQ96T58 3664 aaKnown RBP0.11□□□□□ -2.39
LDHBP3-201ENST00000514909 IQGAP1P46940 1657 aa0.11□□□□□ -2.39
LDHBP3-201ENST00000514909 SMG1Q96Q15 3661 aaKnown RBP0.1□□□□□ -2.39
LDHBP3-201ENST00000514909 SPRR2EP22531 72 aa0.1□□□□□ -2.39
LDHBP3-201ENST00000514909 KRTAP19-6Q3LI70 58 aa0.1□□□□□ -2.39
LDHBP3-201ENST00000514909 DYNC1H1Q14204 4646 aaKnown RBP0.1□□□□□ -2.39
LDHBP3-201ENST00000514909 GOLGB1Q14789 3259 aaKnown RBP0.08□□□□□ -2.4
LDHBP3-201ENST00000514909 FAM208AQ9UK61 1670 aaKnown RBP0.08□□□□□ -2.4
LDHBP3-201ENST00000514909 AKAP9Q99996 3911 aa0.07□□□□□ -2.4
LDHBP3-201ENST00000514909 MT1AP04731 61 aa0.07□□□□□ -2.4
LDHBP3-201ENST00000514909 MMP24-AS1A0A0U1RRL7 71 aa0.06□□□□□ -2.4
LDHBP3-201ENST00000514909 MT4P47944 62 aa0.06□□□□□ -2.4
LDHBP3-201ENST00000514909 WFDC10BQ8IUB3 73 aa0.06□□□□□ -2.4
LDHBP3-201ENST00000514909 DDX60Q8IY21 1712 aaKnown RBP0.06□□□□□ -2.4
LDHBP3-201ENST00000514909 DNAH1Q9P2D7 4330 aa0.03□□□□□ -2.4
LDHBP3-201ENST00000514909 APOBP04114 4563 aaKnown RBP0.03□□□□□ -2.4
LDHBP3-201ENST00000514909 ACACAQ13085 2346 aa0.02□□□□□ -2.41
LDHBP3-201ENST00000514909 TFF3Q07654 80 aa0.01□□□□□ -2.41
LDHBP3-201ENST00000514909 M0QY20 66 aa-0.02□□□□□ -2.41
LDHBP3-201ENST00000514909 SMIM2Q9BVW6 85 aa-0.02□□□□□ -2.41
LDHBP3-201ENST00000514909 DEFB110Q30KQ9 67 aa-0.03□□□□□ -2.41
LDHBP3-201ENST00000514909 FAT1Q14517 4588 aa-0.04□□□□□ -2.42
LDHBP3-201ENST00000514909 TNP1P09430 55 aa-0.05□□□□□ -2.42
LDHBP3-201ENST00000514909 DNAH2Q9P225 4427 aa-0.05□□□□□ -2.42
LDHBP3-201ENST00000514909 IQGAP2Q13576 1575 aa-0.06□□□□□ -2.42
LDHBP3-201ENST00000514909 A8MTW9 85 aa-0.06□□□□□ -2.42
LDHBP3-201ENST00000514909 SPRR2FQ96RM1 72 aa-0.06□□□□□ -2.42
LDHBP3-201ENST00000514909 DNAH5Q8TE73 4624 aa-0.07□□□□□ -2.42
LDHBP3-201ENST00000514909 NFAT5O94916 1531 aa-0.08□□□□□ -2.42
LDHBP3-201ENST00000514909 CMYA5Q8N3K9 4069 aa-0.09□□□□□ -2.42
LDHBP3-201ENST00000514909 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms