RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-223ENST00000514402 FSIP2Q5CZC0 6907 aa-0.02□□□□□ -2.41
MATR3-223ENST00000514402 DNAH6Q9C0G6 4158 aa-0.02□□□□□ -2.41
MATR3-223ENST00000514402 MT1HP80294 61 aa-0.02□□□□□ -2.41
MATR3-223ENST00000514402 LAMA5O15230 3695 aa-0.02□□□□□ -2.41
MATR3-223ENST00000514402 DNAH2Q9P225 4427 aa-0.02□□□□□ -2.41
MATR3-223ENST00000514402 NBEAQ8NFP9 2946 aa-0.03□□□□□ -2.41
MATR3-223ENST00000514402 VPS13DQ5THJ4 4388 aa-0.03□□□□□ -2.41
MATR3-223ENST00000514402 FRYQ5TBA9 3013 aa-0.03□□□□□ -2.41
MATR3-223ENST00000514402 SSPOA2VEC9 5147 aa-0.03□□□□□ -2.41
MATR3-223ENST00000514402 NBPF19A0A087WUL8 3843 aa-0.03□□□□□ -2.41
MATR3-223ENST00000514402 CLPSL2Q6UWE3 100 aa-0.03□□□□□ -2.41
MATR3-223ENST00000514402 CCDC168Q8NDH2 2452 aa-0.03□□□□□ -2.41
MATR3-223ENST00000514402 MUC2Q02817 5179 aa-0.03□□□□□ -2.41
MATR3-223ENST00000514402 SPENQ96T58 3664 aaKnown RBP-0.03□□□□□ -2.41
MATR3-223ENST00000514402 ITPR1Q14643 2758 aa-0.04□□□□□ -2.42
MATR3-223ENST00000514402 COL12A1Q99715 3063 aa-0.04□□□□□ -2.42
MATR3-223ENST00000514402 HIVEP1P15822 2718 aa-0.04□□□□□ -2.42
MATR3-223ENST00000514402 KALRNO60229 2985 aa-0.04□□□□□ -2.42
MATR3-223ENST00000514402 MT1EP04732 61 aa-0.04□□□□□ -2.42
MATR3-223ENST00000514402 MROH2BQ7Z745 1585 aa-0.04□□□□□ -2.42
MATR3-223ENST00000514402 MXRA5Q9NR99 2828 aa-0.04□□□□□ -2.42
MATR3-223ENST00000514402 DNAH7Q8WXX0 4024 aa-0.04□□□□□ -2.42
MATR3-223ENST00000514402 CHD7Q9P2D1 2997 aa-0.04□□□□□ -2.42
MATR3-223ENST00000514402 WDR87Q6ZQQ6 2873 aa-0.04□□□□□ -2.42
MATR3-223ENST00000514402 NBEAL2Q6ZNJ1 2754 aa-0.05□□□□□ -2.42
MATR3-223ENST00000514402 COL6A5A8TX70 2615 aa-0.05□□□□□ -2.42
MATR3-223ENST00000514402 MUC12Q9UKN1 5478 aa-0.05□□□□□ -2.42
MATR3-223ENST00000514402 KMT2CQ8NEZ4 4911 aaKnown RBP-0.05□□□□□ -2.42
MATR3-223ENST00000514402 SMR3BP02814 79 aaPredicted RBP-0.05□□□□□ -2.42
MATR3-223ENST00000514402 KRTAP19-7Q3SYF9 63 aa-0.05□□□□□ -2.42
MATR3-223ENST00000514402 DNAH1Q9P2D7 4330 aa-0.05□□□□□ -2.42
MATR3-223ENST00000514402 MGAM2Q2M2H8 2515 aa-0.05□□□□□ -2.42
MATR3-223ENST00000514402 TLN2Q9Y4G6 2542 aa-0.06□□□□□ -2.42
MATR3-223ENST00000514402 CMYA5Q8N3K9 4069 aa-0.06□□□□□ -2.42
MATR3-223ENST00000514402 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.06□□□□□ -2.42
MATR3-223ENST00000514402 CELSR3Q9NYQ7 3312 aa-0.06□□□□□ -2.42
MATR3-223ENST00000514402 RELNP78509 3460 aa-0.06□□□□□ -2.42
MATR3-223ENST00000514402 DNAH8Q96JB1 4490 aa-0.06□□□□□ -2.42
MATR3-223ENST00000514402 FAT1Q14517 4588 aa-0.07□□□□□ -2.42
MATR3-223ENST00000514402 PCLOQ9Y6V0 5065 aa-0.07□□□□□ -2.42
MATR3-223ENST00000514402 GCC2Q8IWJ2 1684 aa-0.07□□□□□ -2.42
MATR3-223ENST00000514402 DEFB1P60022 68 aa-0.07□□□□□ -2.42
MATR3-223ENST00000514402 SNRPGP62308 76 aaKnown RBP-0.07□□□□□ -2.42
MATR3-223ENST00000514402 MT1XP80297 61 aa-0.07□□□□□ -2.42
MATR3-223ENST00000514402 MT1LQ93083 61 aa-0.07□□□□□ -2.42
MATR3-223ENST00000514402 TRRAPQ9Y4A5 3859 aa-0.07□□□□□ -2.42
MATR3-223ENST00000514402 LAMA3Q16787 3333 aa-0.07□□□□□ -2.42
MATR3-223ENST00000514402 MUC17Q685J3 4493 aa-0.08□□□□□ -2.42
MATR3-223ENST00000514402 SPART-AS1P0CW21 52 aa-0.08□□□□□ -2.42
MATR3-223ENST00000514402 DEFB136Q30KP8 78 aa-0.08□□□□□ -2.42
MATR3-223ENST00000514402 KRTAP19-8Q3LI54 63 aa-0.08□□□□□ -2.42
MATR3-223ENST00000514402 LINC01590Q5TEZ4 76 aa-0.08□□□□□ -2.42
MATR3-223ENST00000514402 MGAQ8IWI9 3026 aa-0.08□□□□□ -2.42
MATR3-223ENST00000514402 ITPR3Q14573 2671 aa-0.08□□□□□ -2.42
MATR3-223ENST00000514402 SPTBN5Q9NRC6 3674 aaKnown RBP-0.08□□□□□ -2.42
MATR3-223ENST00000514402 USP9YO00507 2555 aaPredicted RBP-0.08□□□□□ -2.42
MATR3-223ENST00000514402 DMXL2Q8TDJ6 3036 aa-0.08□□□□□ -2.42
MATR3-223ENST00000514402 CRYBG3Q68DQ2 2970 aa-0.09□□□□□ -2.42
MATR3-223ENST00000514402 UBR4Q5T4S7 5183 aa-0.09□□□□□ -2.42
MATR3-223ENST00000514402 HERC1Q15751 4861 aa-0.09□□□□□ -2.42
MATR3-223ENST00000514402 MT4P47944 62 aa-0.09□□□□□ -2.42
MATR3-223ENST00000514402 USH2AO75445 5202 aa-0.09□□□□□ -2.42
MATR3-223ENST00000514402 STARD9Q9P2P6 4700 aa-0.09□□□□□ -2.42
MATR3-223ENST00000514402 C5orf42Q9H799 3197 aa-0.09□□□□□ -2.42
MATR3-223ENST00000514402 CSMD1Q96PZ7 3565 aa-0.09□□□□□ -2.42
MATR3-223ENST00000514402 LAMA2P24043 3122 aaKnown RBP-0.09□□□□□ -2.42
MATR3-223ENST00000514402 RYR1P21817 5038 aa-0.09□□□□□ -2.42
MATR3-223ENST00000514402 USP9XQ93008 2570 aaPredicted RBP-0.09□□□□□ -2.42
MATR3-223ENST00000514402 TEX15Q9BXT5 2789 aa-0.1□□□□□ -2.42
MATR3-223ENST00000514402 EPPK1P58107 5090 aaKnown RBP-0.1□□□□□ -2.43
MATR3-223ENST00000514402 NIPBLQ6KC79 2804 aaeCLIP-0.1□□□□□ -2.43
MATR3-223ENST00000514402 MT1HL1P0DM35 61 aa-0.1□□□□□ -2.43
MATR3-223ENST00000514402 LEAP2Q969E1 77 aa-0.1□□□□□ -2.43
MATR3-223ENST00000514402 DNHD1Q96M86 4753 aa-0.1□□□□□ -2.43
MATR3-223ENST00000514402 DNAH10Q8IVF4 4471 aa-0.11□□□□□ -2.43
MATR3-223ENST00000514402 CFAP46Q8IYW2 2715 aa-0.11□□□□□ -2.43
MATR3-223ENST00000514402 PLECQ15149 4684 aaKnown RBP-0.11□□□□□ -2.43
MATR3-223ENST00000514402 RPL39P62891 51 aaKnown RBP-0.11□□□□□ -2.43
MATR3-223ENST00000514402 LRBAP50851 2863 aa-0.11□□□□□ -2.43
MATR3-223ENST00000514402 DNAH17Q9UFH2 4485 aa-0.11□□□□□ -2.43
MATR3-223ENST00000514402 ADGRG4Q8IZF6 3080 aa-0.11□□□□□ -2.43
MATR3-223ENST00000514402 DYNC1H1Q14204 4646 aaKnown RBP-0.11□□□□□ -2.43
MATR3-223ENST00000514402 EYSQ5T1H1 3165 aa-0.12□□□□□ -2.43
MATR3-223ENST00000514402 FRYLO94915 3013 aa-0.12□□□□□ -2.43
MATR3-223ENST00000514402 RNF213Q63HN8 5207 aa-0.12□□□□□ -2.43
MATR3-223ENST00000514402 MT2AP02795 61 aa-0.12□□□□□ -2.43
MATR3-223ENST00000514402 RPS29P62273 56 aaKnown RBP-0.12□□□□□ -2.43
MATR3-223ENST00000514402 MT1MQ8N339 61 aa-0.12□□□□□ -2.43
MATR3-223ENST00000514402 DSTQ03001 7570 aaKnown RBP-0.12□□□□□ -2.43
MATR3-223ENST00000514402 ATMQ13315 3056 aa-0.12□□□□□ -2.43
MATR3-223ENST00000514402 CFAP54Q96N23 3096 aa-0.12□□□□□ -2.43
MATR3-223ENST00000514402 HERC2O95714 4834 aa-0.13□□□□□ -2.43
MATR3-223ENST00000514402 ZFHX4Q86UP3 3567 aa-0.13□□□□□ -2.43
MATR3-223ENST00000514402 CSMD2Q7Z408 3487 aa-0.13□□□□□ -2.43
MATR3-223ENST00000514402 PRUNE2Q8WUY3 3088 aa-0.13□□□□□ -2.43
MATR3-223ENST00000514402 DEFB124Q8NES8 71 aa-0.13□□□□□ -2.43
MATR3-223ENST00000514402 RPL39LQ96EH5 51 aaKnown RBP-0.13□□□□□ -2.43
MATR3-223ENST00000514402 TOMM7Q9P0U1 55 aa-0.13□□□□□ -2.43
MATR3-223ENST00000514402 SRCAPQ6ZRS2 3230 aa-0.13□□□□□ -2.43
MATR3-223ENST00000514402 BIRC6Q9NR09 4857 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms