RNA–Protein interactions for RNA: ENST00000513803.5

NFKB1-211, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-211ENST00000513803 KRTAP4-8Q9BYQ9 185 aa4.5□□□□□ -1.69
NFKB1-211ENST00000513803 MMP24-AS1A0A0U1RRL7 71 aa4.49□□□□□ -1.69
NFKB1-211ENST00000513803 hDV103S1A0JD37 113 aa4.49□□□□□ -1.69
NFKB1-211ENST00000513803 ATXN8Q156A1 80 aa4.49□□□□□ -1.69
NFKB1-211ENST00000513803 KRTAP3-1Q9BYR8 98 aa4.49□□□□□ -1.69
NFKB1-211ENST00000513803 A0A1B0GW54 56 aa4.47□□□□□ -1.69
NFKB1-211ENST00000513803 K7EQZ3 153 aa4.46□□□□□ -1.7
NFKB1-211ENST00000513803 C1orf64Q8NEQ6 169 aa4.45□□□□□ -1.7
NFKB1-211ENST00000513803 PLAC4Q8WY50 150 aa4.45□□□□□ -1.7
NFKB1-211ENST00000513803 H3BT86 120 aa4.43□□□□□ -1.7
NFKB1-211ENST00000513803 BAALC-AS2P0C853 105 aa4.42□□□□□ -1.7
NFKB1-211ENST00000513803 ETDBQ3ZM63 59 aa4.42□□□□□ -1.7
NFKB1-211ENST00000513803 NREPQ16612 68 aa4.41□□□□□ -1.7
NFKB1-211ENST00000513803 KRTAP3-3Q9BYR6 98 aa4.4□□□□□ -1.71
NFKB1-211ENST00000513803 A8MUN3 132 aa4.38□□□□□ -1.71
NFKB1-211ENST00000513803 K7ERU9 68 aa4.38□□□□□ -1.71
NFKB1-211ENST00000513803 PDE6GP18545 87 aa4.37□□□□□ -1.71
NFKB1-211ENST00000513803 HCG22E2RYF7 251 aa4.36□□□□□ -1.71
NFKB1-211ENST00000513803 CXCL6P80162 114 aa4.36□□□□□ -1.71
NFKB1-211ENST00000513803 LOC110117498A0A087WWA1 95 aa4.35□□□□□ -1.71
NFKB1-211ENST00000513803 JMJD7-PLA2G4BH0Y9G9 81 aa4.35□□□□□ -1.71
NFKB1-211ENST00000513803 J3QR89 54 aa4.35□□□□□ -1.71
NFKB1-211ENST00000513803 LCE1DQ5T752 114 aa4.33□□□□□ -1.72
NFKB1-211ENST00000513803 H0YAA0 97 aa4.32□□□□□ -1.72
NFKB1-211ENST00000513803 CASC2Q6XLA1 102 aa4.32□□□□□ -1.72
NFKB1-211ENST00000513803 HMCN1Q96RW7 5635 aa4.3□□□□□ -1.72
NFKB1-211ENST00000513803 FAM240AA0A1B0GVK7 77 aa4.3□□□□□ -1.72
NFKB1-211ENST00000513803 ACYP1P07311 99 aa4.3□□□□□ -1.72
NFKB1-211ENST00000513803 KRTAP10-7P60409 375 aaPredicted RBP4.3□□□□□ -1.72
NFKB1-211ENST00000513803 KRTAP10-12P60413 245 aa4.3□□□□□ -1.72
NFKB1-211ENST00000513803 KRTAP5-10Q6L8G5 202 aa4.29□□□□□ -1.72
NFKB1-211ENST00000513803 AHNAK2Q8IVF2 5795 aa4.29□□□□□ -1.72
NFKB1-211ENST00000513803 C14orf132Q9NPU4 83 aa4.28□□□□□ -1.72
NFKB1-211ENST00000513803 BPY2O14599 106 aa4.27□□□□□ -1.73
NFKB1-211ENST00000513803 A0A087WVE0 104 aa4.25□□□□□ -1.73
NFKB1-211ENST00000513803 ADM2Q7Z4H4 148 aa4.25□□□□□ -1.73
NFKB1-211ENST00000513803 NDUFC1O43677 76 aa4.24□□□□□ -1.73
NFKB1-211ENST00000513803 MT4P47944 62 aa4.23□□□□□ -1.73
NFKB1-211ENST00000513803 LCE4AQ5TA78 99 aa4.22□□□□□ -1.73
NFKB1-211ENST00000513803 LINC00643Q86TS7 51 aa4.22□□□□□ -1.73
NFKB1-211ENST00000513803 LCE5AQ5TCM9 118 aa4.21□□□□□ -1.74
NFKB1-211ENST00000513803 Q8N9L7 120 aa4.21□□□□□ -1.74
NFKB1-211ENST00000513803 R4GN34 69 aa4.21□□□□□ -1.74
NFKB1-211ENST00000513803 KRTAP5-7Q6L8G8 165 aa4.2□□□□□ -1.74
NFKB1-211ENST00000513803 MT-ATP8P03928 68 aa4.19□□□□□ -1.74
NFKB1-211ENST00000513803 SCGB1A1P11684 91 aa4.16□□□□□ -1.74
NFKB1-211ENST00000513803 UBL5Q9BZL1 73 aa4.16□□□□□ -1.74
NFKB1-211ENST00000513803 M0QZ58 72 aa4.14□□□□□ -1.75
NFKB1-211ENST00000513803 ATP5EP2Q5VTU8 51 aa4.14□□□□□ -1.75
NFKB1-211ENST00000513803 TP53AIP1Q9HCN2 124 aa4.14□□□□□ -1.75
NFKB1-211ENST00000513803 KRTAP19-3Q7Z4W3 81 aa4.13□□□□□ -1.75
NFKB1-211ENST00000513803 CYP4F30PQ9H0H9 118 aa4.13□□□□□ -1.75
NFKB1-211ENST00000513803 LINC01554Q52M75 96 aa4.11□□□□□ -1.75
NFKB1-211ENST00000513803 C20orf197Q8N268 126 aa4.11□□□□□ -1.75
NFKB1-211ENST00000513803 SPRR5A0A1B0GTR4 108 aa4.1□□□□□ -1.75
NFKB1-211ENST00000513803 HIST1H4AP62805 103 aaKnown RBP4.09□□□□□ -1.75
NFKB1-211ENST00000513803 CYSTM1Q9H1C7 97 aa4.09□□□□□ -1.75
NFKB1-211ENST00000513803 KRTAP5-3Q6L8H2 238 aa4.08□□□□□ -1.76
NFKB1-211ENST00000513803 P0C880 135 aa4.06□□□□□ -1.76
NFKB1-211ENST00000513803 PCP4P48539 62 aa4.05□□□□□ -1.76
NFKB1-211ENST00000513803 MT1EP04732 61 aa4.04□□□□□ -1.76
NFKB1-211ENST00000513803 KRTAP19-7Q3SYF9 63 aa4.04□□□□□ -1.76
NFKB1-211ENST00000513803 KRTAP4-6Q9BYQ5 205 aa4.04□□□□□ -1.76
NFKB1-211ENST00000513803 LOC101927531A0A1B0GV80 90 aa4.02□□□□□ -1.77
NFKB1-211ENST00000513803 TRAV22A0A0B4J277 110 aa4.01□□□□□ -1.77
NFKB1-211ENST00000513803 ATOX1O00244 68 aa4.01□□□□□ -1.77
NFKB1-211ENST00000513803 KRTAP5-4Q6L8H1 288 aa4.01□□□□□ -1.77
NFKB1-211ENST00000513803 MT1GP13640 62 aa4□□□□□ -1.77
NFKB1-211ENST00000513803 PP632Q6XCG6 107 aa3.99□□□□□ -1.77
NFKB1-211ENST00000513803 SMIM20Q8N5G0 67 aa3.99□□□□□ -1.77
NFKB1-211ENST00000513803 ANAPC13Q9BS18 74 aa3.99□□□□□ -1.77
NFKB1-211ENST00000513803 SERP2Q8N6R1 65 aa3.98□□□□□ -1.77
NFKB1-211ENST00000513803 TRAV7A0A075B6U4 112 aa3.97□□□□□ -1.77
NFKB1-211ENST00000513803 OCR1Q9BZK8 76 aa3.97□□□□□ -1.77
NFKB1-211ENST00000513803 COX7CP15954 63 aa3.96□□□□□ -1.78
NFKB1-211ENST00000513803 UQCRQO14949 82 aa3.95□□□□□ -1.78
NFKB1-211ENST00000513803 CCDC179H3BU77 68 aa3.93□□□□□ -1.78
NFKB1-211ENST00000513803 KRTAP3-2Q9BYR7 98 aa3.92□□□□□ -1.78
NFKB1-211ENST00000513803 MT1MQ8N339 61 aa3.88□□□□□ -1.79
NFKB1-211ENST00000513803 H3BPC8 53 aa3.86□□□□□ -1.79
NFKB1-211ENST00000513803 MP68P56378 58 aa3.83□□□□□ -1.8
NFKB1-211ENST00000513803 H0Y9P7 68 aa3.82□□□□□ -1.8
NFKB1-211ENST00000513803 H7BZZ5 65 aa3.82□□□□□ -1.8
NFKB1-211ENST00000513803 KRTAP20-2Q3LI61 65 aa3.82□□□□□ -1.8
NFKB1-211ENST00000513803 KRTAP19-5Q3LI72 72 aa3.82□□□□□ -1.8
NFKB1-211ENST00000513803 SNURFQ9Y675 71 aa3.82□□□□□ -1.8
NFKB1-211ENST00000513803 CAMK2N1Q7Z7J9 78 aa3.8□□□□□ -1.8
NFKB1-211ENST00000513803 LINC00208Q96KT6 92 aa3.8□□□□□ -1.8
NFKB1-211ENST00000513803 KRTAP4-3Q9BYR4 195 aa3.8□□□□□ -1.8
NFKB1-211ENST00000513803 TMEM258P61165 79 aa3.78□□□□□ -1.8
NFKB1-211ENST00000513803 MT1LQ93083 61 aa3.78□□□□□ -1.8
NFKB1-211ENST00000513803 AHNAKQ09666 5890 aaKnown RBP3.76□□□□□ -1.81
NFKB1-211ENST00000513803 SPANXA2-OT1Q8N9U9 137 aa3.76□□□□□ -1.81
NFKB1-211ENST00000513803 A0A0D9SG42 100 aa3.75□□□□□ -1.81
NFKB1-211ENST00000513803 RPS28P62857 69 aaKnown RBP3.74□□□□□ -1.81
NFKB1-211ENST00000513803 ATP5EP56381 51 aaPredicted RBP3.73□□□□□ -1.81
NFKB1-211ENST00000513803 KRTAP12-4P60329 112 aa3.71□□□□□ -1.82
NFKB1-211ENST00000513803 SVIPQ8NHG7 77 aa3.7□□□□□ -1.82
NFKB1-211ENST00000513803 SERP1Q9Y6X1 66 aa3.68□□□□□ -1.82
NFKB1-211ENST00000513803 MUC5ACP98088 5654 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms