RNA–Protein interactions for RNA: ENST00000513654.5

EXOSC9-212, Transcript of exosome component 9, humanhuman

TSL 2

Gene EXOSC9, Length 3,882 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-212ENST00000513654 RPS29P62273 56 aaKnown RBP3.46□□□□□ -1.85
EXOSC9-212ENST00000513654 TPRXLQ17RH7 258 aa3.46□□□□□ -1.85
EXOSC9-212ENST00000513654 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
EXOSC9-212ENST00000513654 VPS13BQ7Z7G8 4022 aa3.45□□□□□ -1.86
EXOSC9-212ENST00000513654 PRKDCP78527 4128 aaKnown RBP3.44□□□□□ -1.86
EXOSC9-212ENST00000513654 KRTAP13-4Q3LI77 160 aa3.44□□□□□ -1.86
EXOSC9-212ENST00000513654 KRTAP10-6P60371 365 aaPredicted RBP3.43□□□□□ -1.86
EXOSC9-212ENST00000513654 LOC100996750A0A140TA64 210 aa3.41□□□□□ -1.86
EXOSC9-212ENST00000513654 KRTAP4-6Q9BYQ5 205 aa3.41□□□□□ -1.86
EXOSC9-212ENST00000513654 S4R3F8 94 aa3.39□□□□□ -1.87
EXOSC9-212ENST00000513654 KRTAP15-1Q3LI76 137 aa3.37□□□□□ -1.87
EXOSC9-212ENST00000513654 KRTAP12-2P59991 146 aa3.36□□□□□ -1.87
EXOSC9-212ENST00000513654 DNHD1Q96M86 4753 aa3.34□□□□□ -1.87
EXOSC9-212ENST00000513654 FAT2Q9NYQ8 4349 aa3.34□□□□□ -1.88
EXOSC9-212ENST00000513654 HYDINQ4G0P3 5121 aa3.33□□□□□ -1.88
EXOSC9-212ENST00000513654 PKD1P98161 4303 aa3.33□□□□□ -1.88
EXOSC9-212ENST00000513654 KRTAP10-8P60410 259 aa3.32□□□□□ -1.88
EXOSC9-212ENST00000513654 FAT1Q14517 4588 aa3.31□□□□□ -1.88
EXOSC9-212ENST00000513654 KRTAP12-1P59990 96 aa3.31□□□□□ -1.88
EXOSC9-212ENST00000513654 SACSQ9NZJ4 4579 aa3.31□□□□□ -1.88
EXOSC9-212ENST00000513654 PKHD1P08F94 4074 aa3.27□□□□□ -1.89
EXOSC9-212ENST00000513654 DYNC1H1Q14204 4646 aaKnown RBP3.26□□□□□ -1.89
EXOSC9-212ENST00000513654 XP32Q5T750 250 aa3.26□□□□□ -1.89
EXOSC9-212ENST00000513654 KRTAP10-4P60372 401 aaPredicted RBP3.25□□□□□ -1.89
EXOSC9-212ENST00000513654 M0QZ58 72 aa3.24□□□□□ -1.89
EXOSC9-212ENST00000513654 MYCBP2O75592 4640 aa3.21□□□□□ -1.9
EXOSC9-212ENST00000513654 PKHD1L1Q86WI1 4243 aa3.21□□□□□ -1.9
EXOSC9-212ENST00000513654 PLAC4Q8WY50 150 aa3.2□□□□□ -1.9
EXOSC9-212ENST00000513654 R4GN34 69 aa3.2□□□□□ -1.9
EXOSC9-212ENST00000513654 APOBP04114 4563 aaKnown RBP3.19□□□□□ -1.9
EXOSC9-212ENST00000513654 HSPG2P98160 4391 aa3.19□□□□□ -1.9
EXOSC9-212ENST00000513654 LUZP6Q538Z0 58 aa3.19□□□□□ -1.9
EXOSC9-212ENST00000513654 A0A1B0GVY2 172 aa3.18□□□□□ -1.9
EXOSC9-212ENST00000513654 FAT3Q8TDW7 4589 aa3.18□□□□□ -1.9
EXOSC9-212ENST00000513654 LRP1Q07954 4544 aaKnown RBP3.18□□□□□ -1.9
EXOSC9-212ENST00000513654 Q5VSD8 79 aa3.15□□□□□ -1.9
EXOSC9-212ENST00000513654 CAMK2N1Q7Z7J9 78 aa3.09□□□□□ -1.91
EXOSC9-212ENST00000513654 TNXBP22105 4242 aa3.08□□□□□ -1.92
EXOSC9-212ENST00000513654 LPAP08519 4548 aa3.07□□□□□ -1.92
EXOSC9-212ENST00000513654 LRP2P98164 4655 aa3.06□□□□□ -1.92
EXOSC9-212ENST00000513654 KMT2CQ8NEZ4 4911 aaKnown RBP3.05□□□□□ -1.92
EXOSC9-212ENST00000513654 PP632Q6XCG6 107 aa3.04□□□□□ -1.92
EXOSC9-212ENST00000513654 MT1HL1P0DM35 61 aa3.03□□□□□ -1.92
EXOSC9-212ENST00000513654 KRTAP17-1Q9BYP8 105 aa2.98□□□□□ -1.93
EXOSC9-212ENST00000513654 RYR2Q92736 4967 aa2.98□□□□□ -1.93
EXOSC9-212ENST00000513654 TNP1P09430 55 aa2.94□□□□□ -1.94
EXOSC9-212ENST00000513654 RYR1P21817 5038 aa2.94□□□□□ -1.94
EXOSC9-212ENST00000513654 KRTAP4-5Q9BYR2 181 aa2.93□□□□□ -1.94
EXOSC9-212ENST00000513654 KIAA1109Q2LD37 5005 aa2.93□□□□□ -1.94
EXOSC9-212ENST00000513654 KRTAP4-8Q9BYQ9 185 aa2.91□□□□□ -1.94
EXOSC9-212ENST00000513654 KRTAP4-1Q9BYQ7 146 aa2.9□□□□□ -1.95
EXOSC9-212ENST00000513654 RYR3Q15413 4870 aa2.89□□□□□ -1.95
EXOSC9-212ENST00000513654 LCE4AQ5TA78 99 aa2.89□□□□□ -1.95
EXOSC9-212ENST00000513654 ABCA13Q86UQ4 5058 aa2.86□□□□□ -1.95
EXOSC9-212ENST00000513654 KRTAP9-4Q9BYQ2 154 aa2.83□□□□□ -1.96
EXOSC9-212ENST00000513654 KRTAP9-6A0A140TA67 174 aa2.83□□□□□ -1.96
EXOSC9-212ENST00000513654 SPRR5A0A1B0GTR4 108 aa2.83□□□□□ -1.96
EXOSC9-212ENST00000513654 KRTAP9-7A8MTY7 169 aa2.83□□□□□ -1.96
EXOSC9-212ENST00000513654 MUC17Q685J3 4493 aa2.82□□□□□ -1.96
EXOSC9-212ENST00000513654 KRTAP9-9Q9BYP9 154 aa2.8□□□□□ -1.96
EXOSC9-212ENST00000513654 EPPK1P58107 5090 aaKnown RBP2.8□□□□□ -1.96
EXOSC9-212ENST00000513654 KRTAP19-4Q3LI73 84 aa2.79□□□□□ -1.96
EXOSC9-212ENST00000513654 KRTAP19-2Q3LHN2 52 aa2.78□□□□□ -1.96
EXOSC9-212ENST00000513654 KRTAP4-8A0A0G2JLE6 195 aa2.78□□□□□ -1.96
EXOSC9-212ENST00000513654 KRTAP9-2Q9BYQ4 174 aa2.77□□□□□ -1.97
EXOSC9-212ENST00000513654 M0R2T5 61 aa2.77□□□□□ -1.97
EXOSC9-212ENST00000513654 BIRC6Q9NR09 4857 aa2.77□□□□□ -1.97
EXOSC9-212ENST00000513654 PRO2289Q9P1D8 64 aa2.76□□□□□ -1.97
EXOSC9-212ENST00000513654 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.76□□□□□ -1.97
EXOSC9-212ENST00000513654 HERC2O95714 4834 aa2.76□□□□□ -1.97
EXOSC9-212ENST00000513654 LCE3AQ5TA76 89 aa2.74□□□□□ -1.97
EXOSC9-212ENST00000513654 KRTAP4-7Q9BYR0 210 aa2.74□□□□□ -1.97
EXOSC9-212ENST00000513654 MUC2Q02817 5179 aa2.74□□□□□ -1.97
EXOSC9-212ENST00000513654 LCE5AQ5TCM9 118 aa2.73□□□□□ -1.97
EXOSC9-212ENST00000513654 KRTAP9-8Q9BYQ0 159 aa2.71□□□□□ -1.98
EXOSC9-212ENST00000513654 FLGP20930 4061 aaPredicted RBP2.7□□□□□ -1.98
EXOSC9-212ENST00000513654 KRTAP19-1Q8IUB9 90 aa2.7□□□□□ -1.98
EXOSC9-212ENST00000513654 INE1O15225 51 aa2.69□□□□□ -1.98
EXOSC9-212ENST00000513654 KRTAP5-3Q6L8H2 238 aa2.69□□□□□ -1.98
EXOSC9-212ENST00000513654 LCE3BQ5TA77 95 aa2.69□□□□□ -1.98
EXOSC9-212ENST00000513654 HERC1Q15751 4861 aa2.66□□□□□ -1.98
EXOSC9-212ENST00000513654 SPRR2GQ9BYE4 73 aa2.66□□□□□ -1.98
EXOSC9-212ENST00000513654 KRTAP10-10P60014 251 aa2.64□□□□□ -1.99
EXOSC9-212ENST00000513654 PCLOQ9Y6V0 5065 aa2.64□□□□□ -1.99
EXOSC9-212ENST00000513654 KRTAP8-1Q8IUC2 63 aa2.62□□□□□ -1.99
EXOSC9-212ENST00000513654 FAT4Q6V0I7 4981 aa2.61□□□□□ -1.99
EXOSC9-212ENST00000513654 KRTAP12-3P60328 96 aa2.61□□□□□ -1.99
EXOSC9-212ENST00000513654 KRTAP9-3Q9BYQ3 159 aa2.6□□□□□ -1.99
EXOSC9-212ENST00000513654 KRTAP10-12P60413 245 aa2.57□□□□□ -2
EXOSC9-212ENST00000513654 KRTAP4-9Q9BYQ8 210 aa2.57□□□□□ -2
EXOSC9-212ENST00000513654 LCE1DQ5T752 114 aa2.57□□□□□ -2
EXOSC9-212ENST00000513654 KRTAP4-2Q9BYR5 136 aa2.57□□□□□ -2
EXOSC9-212ENST00000513654 MT1FP04733 61 aa2.55□□□□□ -2
EXOSC9-212ENST00000513654 KRTAP4-12Q9BQ66 201 aa2.55□□□□□ -2
EXOSC9-212ENST00000513654 MT2AP02795 61 aa2.54□□□□□ -2
EXOSC9-212ENST00000513654 HMCN2Q8NDA2 5059 aa2.53□□□□□ -2
EXOSC9-212ENST00000513654 KRTAP10-5P60370 271 aa2.52□□□□□ -2.01
EXOSC9-212ENST00000513654 MT1HP80294 61 aa2.52□□□□□ -2.01
EXOSC9-212ENST00000513654 MT1XP80297 61 aa2.52□□□□□ -2.01
EXOSC9-212ENST00000513654 KRTAP10-7P60409 375 aaPredicted RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms