RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 F8W1H4 67 aa3.39□□□□□ -1.87
HTT-212ENST00000513639 K7EP34 96 aa3.39□□□□□ -1.87
HTT-212ENST00000513639 C5orf47Q569G3 176 aa3.38□□□□□ -1.87
HTT-212ENST00000513639 C1orf64Q8NEQ6 169 aa3.38□□□□□ -1.87
HTT-212ENST00000513639 FAM236AA0A1B0GUQ0 79 aa3.37□□□□□ -1.87
HTT-212ENST00000513639 FAM236BA0A1B0GV22 79 aa3.37□□□□□ -1.87
HTT-212ENST00000513639 S4R3F8 94 aa3.37□□□□□ -1.87
HTT-212ENST00000513639 ACYP1P07311 99 aa3.33□□□□□ -1.88
HTT-212ENST00000513639 ETDBQ3ZM63 59 aa3.33□□□□□ -1.88
HTT-212ENST00000513639 LCA10Q71F78 164 aa3.33□□□□□ -1.88
HTT-212ENST00000513639 CYP4F30PQ9H0H9 118 aa3.32□□□□□ -1.88
HTT-212ENST00000513639 KRTAP6-3Q3LI67 103 aa3.31□□□□□ -1.88
HTT-212ENST00000513639 Q5VV11 94 aa3.31□□□□□ -1.88
HTT-212ENST00000513639 KRTAP5-3Q6L8H2 238 aa3.31□□□□□ -1.88
HTT-212ENST00000513639 LOC101927531A0A1B0GV80 90 aa3.3□□□□□ -1.88
HTT-212ENST00000513639 SPRR2GQ9BYE4 73 aa3.3□□□□□ -1.88
HTT-212ENST00000513639 TRAV22A0A0B4J277 110 aa3.29□□□□□ -1.88
HTT-212ENST00000513639 A6NN06 94 aa3.29□□□□□ -1.88
HTT-212ENST00000513639 KLKP1Q107X0 134 aa3.29□□□□□ -1.88
HTT-212ENST00000513639 CRIPTQ9P021 101 aa3.29□□□□□ -1.88
HTT-212ENST00000513639 PCP4L1A6NKN8 68 aa3.28□□□□□ -1.88
HTT-212ENST00000513639 ATOX1O00244 68 aa3.28□□□□□ -1.88
HTT-212ENST00000513639 ATP5EP2Q5VTU8 51 aa3.28□□□□□ -1.88
HTT-212ENST00000513639 FAM240AA0A1B0GVK7 77 aa3.27□□□□□ -1.89
HTT-212ENST00000513639 UQCRQO14949 82 aa3.27□□□□□ -1.89
HTT-212ENST00000513639 KRTAP19-8Q3LI54 63 aa3.27□□□□□ -1.89
HTT-212ENST00000513639 IMUPQ9GZP8 106 aa3.27□□□□□ -1.89
HTT-212ENST00000513639 NDUFC1O43677 76 aa3.26□□□□□ -1.89
HTT-212ENST00000513639 HIST1H4AP62805 103 aaKnown RBP3.26□□□□□ -1.89
HTT-212ENST00000513639 MT1BP07438 61 aa3.25□□□□□ -1.89
HTT-212ENST00000513639 A8MUN3 132 aa3.23□□□□□ -1.89
HTT-212ENST00000513639 H0Y9P7 68 aa3.23□□□□□ -1.89
HTT-212ENST00000513639 H0YAA0 97 aa3.22□□□□□ -1.89
HTT-212ENST00000513639 KRTAP10-5P60370 271 aa3.22□□□□□ -1.89
HTT-212ENST00000513639 LINC00643Q86TS7 51 aa3.22□□□□□ -1.89
HTT-212ENST00000513639 NEBP20929 6669 aa3.22□□□□□ -1.89
HTT-212ENST00000513639 MUC12Q9UKN1 5478 aa3.21□□□□□ -1.9
HTT-212ENST00000513639 A0A087WVE0 104 aa3.2□□□□□ -1.9
HTT-212ENST00000513639 MP68P56378 58 aa3.2□□□□□ -1.9
HTT-212ENST00000513639 LINC00208Q96KT6 92 aa3.19□□□□□ -1.9
HTT-212ENST00000513639 ADM2Q7Z4H4 148 aa3.17□□□□□ -1.9
HTT-212ENST00000513639 KMT2DO14686 5537 aa3.16□□□□□ -1.9
HTT-212ENST00000513639 MDN1Q9NU22 5596 aa3.15□□□□□ -1.9
HTT-212ENST00000513639 H3BPC8 53 aa3.15□□□□□ -1.91
HTT-212ENST00000513639 C20orf197Q8N268 126 aa3.15□□□□□ -1.91
HTT-212ENST00000513639 PRO2289Q9P1D8 64 aa3.15□□□□□ -1.91
HTT-212ENST00000513639 PLAC4Q8WY50 150 aa3.14□□□□□ -1.91
HTT-212ENST00000513639 OCR1Q9BZK8 76 aa3.14□□□□□ -1.91
HTT-212ENST00000513639 J3QR89 54 aa3.13□□□□□ -1.91
HTT-212ENST00000513639 SCGB1A1P11684 91 aa3.13□□□□□ -1.91
HTT-212ENST00000513639 KRTAP5-9P26371 169 aa3.12□□□□□ -1.91
HTT-212ENST00000513639 R4GN34 69 aa3.12□□□□□ -1.91
HTT-212ENST00000513639 PRAC1Q96KF2 57 aa3.11□□□□□ -1.91
HTT-212ENST00000513639 KRTAP20-1Q3LI63 56 aa3.08□□□□□ -1.92
HTT-212ENST00000513639 DMAC1Q96GE9 116 aa3.08□□□□□ -1.92
HTT-212ENST00000513639 A0A1B0GV90 55 aa3.07□□□□□ -1.92
HTT-212ENST00000513639 TRAV7A0A075B6U4 112 aa3.06□□□□□ -1.92
HTT-212ENST00000513639 M0QZ58 72 aa3.06□□□□□ -1.92
HTT-212ENST00000513639 P0C880 135 aa3.05□□□□□ -1.92
HTT-212ENST00000513639 ACYP2P14621 99 aa3.05□□□□□ -1.92
HTT-212ENST00000513639 SPTSSBQ8NFR3 76 aa3.05□□□□□ -1.92
HTT-212ENST00000513639 MT1XP80297 61 aa3.04□□□□□ -1.92
HTT-212ENST00000513639 LCE1AQ5T7P2 110 aa3.04□□□□□ -1.92
HTT-212ENST00000513639 SMIM20Q8N5G0 67 aa3.03□□□□□ -1.92
HTT-212ENST00000513639 SPRR2FQ96RM1 72 aa3.03□□□□□ -1.92
HTT-212ENST00000513639 KRTAP2-3P0C7H8 128 aa3.02□□□□□ -1.93
HTT-212ENST00000513639 KRTAP12-2P59991 146 aa3.02□□□□□ -1.93
HTT-212ENST00000513639 LINC01554Q52M75 96 aa3.02□□□□□ -1.93
HTT-212ENST00000513639 KRTAP2-4Q9BYR9 128 aa3.02□□□□□ -1.93
HTT-212ENST00000513639 KRTAP8-1Q8IUC2 63 aa3.01□□□□□ -1.93
HTT-212ENST00000513639 CHKB-CPT1BH3BT56 60 aa2.98□□□□□ -1.93
HTT-212ENST00000513639 MT-ATP8P03928 68 aa2.98□□□□□ -1.93
HTT-212ENST00000513639 SPRR2EP22531 72 aa2.98□□□□□ -1.93
HTT-212ENST00000513639 MT3P25713 68 aa2.98□□□□□ -1.93
HTT-212ENST00000513639 SPRR2BP35325 72 aa2.98□□□□□ -1.93
HTT-212ENST00000513639 SPRR2AP35326 72 aa2.98□□□□□ -1.93
HTT-212ENST00000513639 NDUFAF8A1L188 74 aa2.97□□□□□ -1.93
HTT-212ENST00000513639 K7ERU9 68 aa2.97□□□□□ -1.93
HTT-212ENST00000513639 SPANXA2-OT1Q8N9U9 137 aa2.92□□□□□ -1.94
HTT-212ENST00000513639 KRTAP2-2Q9BYT5 123 aa2.92□□□□□ -1.94
HTT-212ENST00000513639 KRTAP2-1Q9BYU5 128 aa2.92□□□□□ -1.94
HTT-212ENST00000513639 KRTAP10-12P60413 245 aa2.91□□□□□ -1.94
HTT-212ENST00000513639 KRTAP10-7P60409 375 aaPredicted RBP2.9□□□□□ -1.95
HTT-212ENST00000513639 SNURFQ9Y675 71 aa2.9□□□□□ -1.95
HTT-212ENST00000513639 SPRR2DP22532 72 aa2.89□□□□□ -1.95
HTT-212ENST00000513639 SERP2Q8N6R1 65 aa2.88□□□□□ -1.95
HTT-212ENST00000513639 SEC61GP60059 68 aa2.87□□□□□ -1.95
HTT-212ENST00000513639 CAMK2N1Q7Z7J9 78 aa2.87□□□□□ -1.95
HTT-212ENST00000513639 SERP1Q9Y6X1 66 aa2.85□□□□□ -1.95
HTT-212ENST00000513639 KRTAP13-4Q3LI77 160 aa2.81□□□□□ -1.96
HTT-212ENST00000513639 COA5Q86WW8 74 aa2.8□□□□□ -1.96
HTT-212ENST00000513639 A0A1B0GU33 70 aa2.78□□□□□ -1.96
HTT-212ENST00000513639 DSTQ03001 7570 aaKnown RBP2.77□□□□□ -1.97
HTT-212ENST00000513639 A0A0D9SG42 100 aa2.77□□□□□ -1.97
HTT-212ENST00000513639 COX7CP15954 63 aa2.76□□□□□ -1.97
HTT-212ENST00000513639 SPINT4Q6UDR6 99 aa2.75□□□□□ -1.97
HTT-212ENST00000513639 SPATA8Q6RVD6 105 aa2.74□□□□□ -1.97
HTT-212ENST00000513639 SMIM26A0A096LP01 95 aa2.72□□□□□ -1.97
HTT-212ENST00000513639 KRTAP19-7Q3SYF9 63 aa2.72□□□□□ -1.97
HTT-212ENST00000513639 H7BZZ5 65 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms