RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 TIAM1Q13009 1591 aa-0.8□□□□□ -2.54
RFC1-214ENST00000512726 COL6A5A8TX70 2615 aa-0.81□□□□□ -2.54
RFC1-214ENST00000512726 LRBAP50851 2863 aa-0.81□□□□□ -2.54
RFC1-214ENST00000512726 ADGRG4Q8IZF6 3080 aa-0.81□□□□□ -2.54
RFC1-214ENST00000512726 A0A1B0GUL6 1792 aa-0.81□□□□□ -2.54
RFC1-214ENST00000512726 LAMA2P24043 3122 aaKnown RBP-0.81□□□□□ -2.54
RFC1-214ENST00000512726 HYDINQ4G0P3 5121 aa-0.82□□□□□ -2.54
RFC1-214ENST00000512726 ABCA6Q8N139 1617 aa-0.82□□□□□ -2.54
RFC1-214ENST00000512726 SMR3BP02814 79 aaPredicted RBP-0.82□□□□□ -2.54
RFC1-214ENST00000512726 MAST1Q9Y2H9 1570 aa-0.83□□□□□ -2.54
RFC1-214ENST00000512726 CLPSL2Q6UWE3 100 aa-0.83□□□□□ -2.54
RFC1-214ENST00000512726 DYNC1H1Q14204 4646 aaKnown RBP-0.83□□□□□ -2.54
RFC1-214ENST00000512726 MYO9AB2RTY4 2548 aa-0.83□□□□□ -2.54
RFC1-214ENST00000512726 ALS2Q96Q42 1657 aa-0.84□□□□□ -2.54
RFC1-214ENST00000512726 KRTAP8-1Q8IUC2 63 aa-0.84□□□□□ -2.54
RFC1-214ENST00000512726 GLI2P10070 1586 aa-0.84□□□□□ -2.54
RFC1-214ENST00000512726 RNF213Q63HN8 5207 aa-0.84□□□□□ -2.54
RFC1-214ENST00000512726 M0R1W7 72 aa-0.85□□□□□ -2.55
RFC1-214ENST00000512726 CSMD1Q96PZ7 3565 aa-0.86□□□□□ -2.55
RFC1-214ENST00000512726 DNAH17Q9UFH2 4485 aa-0.86□□□□□ -2.55
RFC1-214ENST00000512726 MGAQ8IWI9 3026 aa-0.87□□□□□ -2.55
RFC1-214ENST00000512726 CHD7Q9P2D1 2997 aa-0.87□□□□□ -2.55
RFC1-214ENST00000512726 FAM208AQ9UK61 1670 aaKnown RBP-0.88□□□□□ -2.55
RFC1-214ENST00000512726 RYR3Q15413 4870 aa-0.88□□□□□ -2.55
RFC1-214ENST00000512726 TRRAPQ9Y4A5 3859 aa-0.89□□□□□ -2.55
RFC1-214ENST00000512726 M0QY20 66 aa-0.9□□□□□ -2.55
RFC1-214ENST00000512726 SERF2P84101 59 aa-0.9□□□□□ -2.55
RFC1-214ENST00000512726 DNAH10Q8IVF4 4471 aa-0.9□□□□□ -2.55
RFC1-214ENST00000512726 EEA1Q15075 1411 aa-0.9□□□□□ -2.55
RFC1-214ENST00000512726 IGIPA6NJ69 53 aa-0.91□□□□□ -2.56
RFC1-214ENST00000512726 NMES1Q9C002 83 aa-0.91□□□□□ -2.56
RFC1-214ENST00000512726 M0QZ58 72 aa-0.92□□□□□ -2.56
RFC1-214ENST00000512726 MT1XP80297 61 aa-0.92□□□□□ -2.56
RFC1-214ENST00000512726 LINC00308Q8TCZ7 52 aa-0.92□□□□□ -2.56
RFC1-214ENST00000512726 TMEM167BQ9NRX6 74 aa-0.92□□□□□ -2.56
RFC1-214ENST00000512726 KAAG1Q9UBP8 84 aa-0.92□□□□□ -2.56
RFC1-214ENST00000512726 RYR2Q92736 4967 aa-0.93□□□□□ -2.56
RFC1-214ENST00000512726 ABRACLQ9P1F3 81 aa-0.93□□□□□ -2.56
RFC1-214ENST00000512726 CFAP46Q8IYW2 2715 aa-0.94□□□□□ -2.56
RFC1-214ENST00000512726 CEP295Q9C0D2 2601 aa-0.94□□□□□ -2.56
RFC1-214ENST00000512726 A8MTW9 85 aa-0.94□□□□□ -2.56
RFC1-214ENST00000512726 EYSQ5T1H1 3165 aa-0.94□□□□□ -2.56
RFC1-214ENST00000512726 UGGT1Q9NYU2 1555 aa-0.95□□□□□ -2.56
RFC1-214ENST00000512726 ABCA10Q8WWZ4 1543 aa-0.95□□□□□ -2.56
RFC1-214ENST00000512726 MT1EP04732 61 aa-0.96□□□□□ -2.56
RFC1-214ENST00000512726 EFCAB6Q5THR3 1501 aa-0.96□□□□□ -2.56
RFC1-214ENST00000512726 KIAA1109Q2LD37 5005 aa-0.96□□□□□ -2.56
RFC1-214ENST00000512726 KIF21BO75037 1637 aa-0.97□□□□□ -2.56
RFC1-214ENST00000512726 PREX2Q70Z35 1606 aa-0.97□□□□□ -2.56
RFC1-214ENST00000512726 SMIM27A0A1W2PRY6 76 aa-0.97□□□□□ -2.56
RFC1-214ENST00000512726 SMIM31A0A1B0GVY4 71 aa-0.98□□□□□ -2.57
RFC1-214ENST00000512726 ZFHX4Q86UP3 3567 aa-0.98□□□□□ -2.57
RFC1-214ENST00000512726 LMO7Q8WWI1 1683 aa-0.98□□□□□ -2.57
RFC1-214ENST00000512726 S100ZQ8WXG8 99 aa-0.99□□□□□ -2.57
RFC1-214ENST00000512726 CPS1P31327 1500 aa-0.99□□□□□ -2.57
RFC1-214ENST00000512726 WFDC10BQ8IUB3 73 aa-1□□□□□ -2.57
RFC1-214ENST00000512726 MT1LQ93083 61 aa-1□□□□□ -2.57
RFC1-214ENST00000512726 SMG1Q96Q15 3661 aaKnown RBP-1.01□□□□□ -2.57
RFC1-214ENST00000512726 H0YGX0 51 aa-1.01□□□□□ -2.57
RFC1-214ENST00000512726 DNAH5Q8TE73 4624 aa-1.02□□□□□ -2.57
RFC1-214ENST00000512726 AGLP35573 1532 aa-1.03□□□□□ -2.57
RFC1-214ENST00000512726 LINC01546A6NGU7 62 aa-1.03□□□□□ -2.57
RFC1-214ENST00000512726 CSMD2Q7Z408 3487 aa-1.03□□□□□ -2.58
RFC1-214ENST00000512726 PRXQ9BXM0 1461 aa-1.05□□□□□ -2.58
RFC1-214ENST00000512726 SPART-AS1P0CW21 52 aa-1.05□□□□□ -2.58
RFC1-214ENST00000512726 SMIM5Q71RC9 77 aa-1.05□□□□□ -2.58
RFC1-214ENST00000512726 MROH2AA6NES4 1674 aa-1.06□□□□□ -2.58
RFC1-214ENST00000512726 ITPR2Q14571 2701 aa-1.06□□□□□ -2.58
RFC1-214ENST00000512726 SYCP2Q9BX26 1530 aa-1.08□□□□□ -2.58
RFC1-214ENST00000512726 TLN1Q9Y490 2541 aaKnown RBP-1.08□□□□□ -2.58
RFC1-214ENST00000512726 DMXL2Q8TDJ6 3036 aa-1.08□□□□□ -2.58
RFC1-214ENST00000512726 DDX60Q8IY21 1712 aaKnown RBP-1.09□□□□□ -2.58
RFC1-214ENST00000512726 CRYBG3Q68DQ2 2970 aa-1.09□□□□□ -2.58
RFC1-214ENST00000512726 ABCA5Q8WWZ7 1642 aa-1.09□□□□□ -2.58
RFC1-214ENST00000512726 DEFB131AP59861 70 aa-1.1□□□□□ -2.59
RFC1-214ENST00000512726 NRXN3Q9Y4C0 1643 aa-1.11□□□□□ -2.59
RFC1-214ENST00000512726 MT1HL1P0DM35 61 aa-1.11□□□□□ -2.59
RFC1-214ENST00000512726 IQGAP1P46940 1657 aa-1.12□□□□□ -2.59
RFC1-214ENST00000512726 PLNP26678 52 aa-1.12□□□□□ -2.59
RFC1-214ENST00000512726 TFF3Q07654 80 aa-1.12□□□□□ -2.59
RFC1-214ENST00000512726 ADCY10Q96PN6 1610 aa-1.12□□□□□ -2.59
RFC1-214ENST00000512726 MT1GP13640 62 aa-1.13□□□□□ -2.59
RFC1-214ENST00000512726 POLR2KP53803 58 aaKnown RBP-1.14□□□□□ -2.59
RFC1-214ENST00000512726 CFAP54Q96N23 3096 aa-1.14□□□□□ -2.59
RFC1-214ENST00000512726 PRUNE2Q8WUY3 3088 aa-1.14□□□□□ -2.59
RFC1-214ENST00000512726 ATMQ13315 3056 aa-1.15□□□□□ -2.59
RFC1-214ENST00000512726 VPS13CQ709C8 3753 aa-1.16□□□□□ -2.59
RFC1-214ENST00000512726 ABCC8Q09428 1581 aa-1.17□□□□□ -2.6
RFC1-214ENST00000512726 SMIM2Q9BVW6 85 aa-1.19□□□□□ -2.6
RFC1-214ENST00000512726 ERICH3Q5RHP9 1530 aa-1.2□□□□□ -2.6
RFC1-214ENST00000512726 MT1MQ8N339 61 aa-1.2□□□□□ -2.6
RFC1-214ENST00000512726 LEAP2Q969E1 77 aa-1.2□□□□□ -2.6
RFC1-214ENST00000512726 CLTCL1P53675 1640 aa-1.21□□□□□ -2.6
RFC1-214ENST00000512726 MT2AP02795 61 aa-1.21□□□□□ -2.6
RFC1-214ENST00000512726 NFAT5O94916 1531 aa-1.21□□□□□ -2.6
RFC1-214ENST00000512726 FANCD2Q9BXW9 1451 aa-1.22□□□□□ -2.6
RFC1-214ENST00000512726 CMC2Q9NRP2 79 aa-1.22□□□□□ -2.6
RFC1-214ENST00000512726 FREM2Q5SZK8 3169 aa-1.22□□□□□ -2.61
RFC1-214ENST00000512726 MYO15AQ9UKN7 3530 aa-1.23□□□□□ -2.61
RFC1-214ENST00000512726 FRYLO94915 3013 aa-1.24□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms