RNA–Protein interactions for RNA: ENST00000512293.1

PDLIM3-207, Transcript of PDZ and LIM domain 3, humanhuman

TSL 3

Gene PDLIM3, Length 581 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-207ENST00000512293 UBL5Q9BZL1 73 aa7.45□□□□□ -1.22
PDLIM3-207ENST00000512293 PRO0461Q9UI25 63 aa7.43□□□□□ -1.22
PDLIM3-207ENST00000512293 SPCS1Q9Y6A9 102 aa7.43□□□□□ -1.22
PDLIM3-207ENST00000512293 H0YAA0 97 aa7.41□□□□□ -1.22
PDLIM3-207ENST00000512293 COL5A1-AS1Q5SY13 56 aa7.41□□□□□ -1.22
PDLIM3-207ENST00000512293 PRO2289Q9P1D8 64 aa7.41□□□□□ -1.22
PDLIM3-207ENST00000512293 KRTAP2-2Q9BYT5 123 aa7.4□□□□□ -1.22
PDLIM3-207ENST00000512293 KRTAP2-1Q9BYU5 128 aa7.4□□□□□ -1.22
PDLIM3-207ENST00000512293 CYP4F30PQ9H0H9 118 aa7.39□□□□□ -1.23
PDLIM3-207ENST00000512293 A0A087WVE0 104 aa7.38□□□□□ -1.23
PDLIM3-207ENST00000512293 K7EP34 96 aa7.36□□□□□ -1.23
PDLIM3-207ENST00000512293 LCE1AQ5T7P2 110 aa7.36□□□□□ -1.23
PDLIM3-207ENST00000512293 MT1XP80297 61 aa7.35□□□□□ -1.23
PDLIM3-207ENST00000512293 KRTAP8-1Q8IUC2 63 aa7.34□□□□□ -1.23
PDLIM3-207ENST00000512293 KRTAP12-2P59991 146 aa7.31□□□□□ -1.24
PDLIM3-207ENST00000512293 NDUFC1O43677 76 aa7.3□□□□□ -1.24
PDLIM3-207ENST00000512293 A8MUN3 132 aa7.29□□□□□ -1.24
PDLIM3-207ENST00000512293 LOC101927531A0A1B0GV80 90 aa7.28□□□□□ -1.24
PDLIM3-207ENST00000512293 KRTAP3-2Q9BYR7 98 aa7.28□□□□□ -1.24
PDLIM3-207ENST00000512293 PCP4L1A6NKN8 68 aa7.27□□□□□ -1.25
PDLIM3-207ENST00000512293 TRAV22A0A0B4J277 110 aa7.25□□□□□ -1.25
PDLIM3-207ENST00000512293 PLAC4Q8WY50 150 aa7.24□□□□□ -1.25
PDLIM3-207ENST00000512293 SPRR2DP22532 72 aa7.23□□□□□ -1.25
PDLIM3-207ENST00000512293 ADM2Q7Z4H4 148 aa7.23□□□□□ -1.25
PDLIM3-207ENST00000512293 GTF2H5Q6ZYL4 71 aa7.2□□□□□ -1.26
PDLIM3-207ENST00000512293 F8W1H4 67 aa7.18□□□□□ -1.26
PDLIM3-207ENST00000512293 ETDBQ3ZM63 59 aa7.18□□□□□ -1.26
PDLIM3-207ENST00000512293 ACYP1P07311 99 aa7.14□□□□□ -1.27
PDLIM3-207ENST00000512293 KRTAP4-8A0A0G2JLE6 195 aa7.13□□□□□ -1.27
PDLIM3-207ENST00000512293 KRTAP4-8Q9BYQ9 185 aa7.13□□□□□ -1.27
PDLIM3-207ENST00000512293 ATOX1O00244 68 aa7.11□□□□□ -1.27
PDLIM3-207ENST00000512293 R4GN34 69 aa7.1□□□□□ -1.27
PDLIM3-207ENST00000512293 UQCRQO14949 82 aa7.08□□□□□ -1.28
PDLIM3-207ENST00000512293 LCE3BQ5TA77 95 aa7.08□□□□□ -1.28
PDLIM3-207ENST00000512293 H0Y9P7 68 aa7.05□□□□□ -1.28
PDLIM3-207ENST00000512293 C20orf197Q8N268 126 aa7.05□□□□□ -1.28
PDLIM3-207ENST00000512293 P0C880 135 aa7.01□□□□□ -1.29
PDLIM3-207ENST00000512293 KRTAP10-12P60413 245 aa7.01□□□□□ -1.29
PDLIM3-207ENST00000512293 M0QZ58 72 aa7□□□□□ -1.29
PDLIM3-207ENST00000512293 FAM240AA0A1B0GVK7 77 aa6.99□□□□□ -1.29
PDLIM3-207ENST00000512293 KRTAP10-7P60409 375 aaPredicted RBP6.98□□□□□ -1.29
PDLIM3-207ENST00000512293 GPR98Q8WXG9 6306 aa6.96□□□□□ -1.29
PDLIM3-207ENST00000512293 ATP5EP2Q5VTU8 51 aa6.95□□□□□ -1.3
PDLIM3-207ENST00000512293 A0A1B0GV90 55 aa6.94□□□□□ -1.3
PDLIM3-207ENST00000512293 HIST1H4AP62805 103 aaKnown RBP6.9□□□□□ -1.3
PDLIM3-207ENST00000512293 LINC00208Q96KT6 92 aa6.9□□□□□ -1.3
PDLIM3-207ENST00000512293 LINC01554Q52M75 96 aa6.88□□□□□ -1.31
PDLIM3-207ENST00000512293 DSTQ03001 7570 aaKnown RBP6.85□□□□□ -1.31
PDLIM3-207ENST00000512293 MP68P56378 58 aa6.82□□□□□ -1.32
PDLIM3-207ENST00000512293 LINC00643Q86TS7 51 aa6.82□□□□□ -1.32
PDLIM3-207ENST00000512293 DMAC1Q96GE9 116 aa6.79□□□□□ -1.32
PDLIM3-207ENST00000512293 OCR1Q9BZK8 76 aa6.78□□□□□ -1.32
PDLIM3-207ENST00000512293 H3BPC8 53 aa6.72□□□□□ -1.33
PDLIM3-207ENST00000512293 MT-ATP8P03928 68 aa6.69□□□□□ -1.34
PDLIM3-207ENST00000512293 LCE5AQ5TCM9 118 aa6.68□□□□□ -1.34
PDLIM3-207ENST00000512293 TRAV7A0A075B6U4 112 aa6.65□□□□□ -1.34
PDLIM3-207ENST00000512293 KRTAP4-9Q9BYQ8 210 aa6.65□□□□□ -1.34
PDLIM3-207ENST00000512293 J3QR89 54 aa6.62□□□□□ -1.35
PDLIM3-207ENST00000512293 KRTAP19-7Q3SYF9 63 aa6.59□□□□□ -1.35
PDLIM3-207ENST00000512293 KRTAP19-3Q7Z4W3 81 aa6.58□□□□□ -1.36
PDLIM3-207ENST00000512293 MT1EP04732 61 aa6.55□□□□□ -1.36
PDLIM3-207ENST00000512293 SPTSSBQ8NFR3 76 aa6.55□□□□□ -1.36
PDLIM3-207ENST00000512293 ACYP2P14621 99 aa6.54□□□□□ -1.36
PDLIM3-207ENST00000512293 LCE1DQ5T752 114 aa6.49□□□□□ -1.37
PDLIM3-207ENST00000512293 HMCN1Q96RW7 5635 aa6.46□□□□□ -1.37
PDLIM3-207ENST00000512293 K7ERU9 68 aa6.45□□□□□ -1.38
PDLIM3-207ENST00000512293 CAMK2N1Q7Z7J9 78 aa6.44□□□□□ -1.38
PDLIM3-207ENST00000512293 CYSTM1Q9H1C7 97 aa6.44□□□□□ -1.38
PDLIM3-207ENST00000512293 SCGB1A1P11684 91 aa6.43□□□□□ -1.38
PDLIM3-207ENST00000512293 LCE4AQ5TA78 99 aa6.42□□□□□ -1.38
PDLIM3-207ENST00000512293 MT1GP13640 62 aa6.41□□□□□ -1.38
PDLIM3-207ENST00000512293 KRTAP13-4Q3LI77 160 aa6.38□□□□□ -1.39
PDLIM3-207ENST00000512293 CHKB-CPT1BH3BT56 60 aa6.37□□□□□ -1.39
PDLIM3-207ENST00000512293 AHNAK2Q8IVF2 5795 aa6.37□□□□□ -1.39
PDLIM3-207ENST00000512293 PP632Q6XCG6 107 aa6.34□□□□□ -1.39
PDLIM3-207ENST00000512293 MT4P47944 62 aa6.33□□□□□ -1.4
PDLIM3-207ENST00000512293 SMIM20Q8N5G0 67 aa6.33□□□□□ -1.4
PDLIM3-207ENST00000512293 KRTAP19-5Q3LI72 72 aa6.28□□□□□ -1.4
PDLIM3-207ENST00000512293 A0A0D9SG42 100 aa6.27□□□□□ -1.41
PDLIM3-207ENST00000512293 KRTAP5-10Q6L8G5 202 aa6.26□□□□□ -1.41
PDLIM3-207ENST00000512293 KRTAP5-4Q6L8H1 288 aa6.25□□□□□ -1.41
PDLIM3-207ENST00000512293 MT1MQ8N339 61 aa6.25□□□□□ -1.41
PDLIM3-207ENST00000512293 SNURFQ9Y675 71 aa6.23□□□□□ -1.41
PDLIM3-207ENST00000512293 SERP2Q8N6R1 65 aa6.19□□□□□ -1.42
PDLIM3-207ENST00000512293 MT1LQ93083 61 aa6.18□□□□□ -1.42
PDLIM3-207ENST00000512293 SPANXA2-OT1Q8N9U9 137 aa6.16□□□□□ -1.42
PDLIM3-207ENST00000512293 KRTAP4-6Q9BYQ5 205 aa6.13□□□□□ -1.43
PDLIM3-207ENST00000512293 KRTAP5-7Q6L8G8 165 aa6.09□□□□□ -1.43
PDLIM3-207ENST00000512293 KRTAP4-3Q9BYR4 195 aa6.06□□□□□ -1.44
PDLIM3-207ENST00000512293 SPINT4Q6UDR6 99 aa6.05□□□□□ -1.44
PDLIM3-207ENST00000512293 COX7CP15954 63 aa6.03□□□□□ -1.44
PDLIM3-207ENST00000512293 KRTAP12-1P59990 96 aa6.02□□□□□ -1.45
PDLIM3-207ENST00000512293 SEC61GP60059 68 aa6.02□□□□□ -1.45
PDLIM3-207ENST00000512293 SPATA8Q6RVD6 105 aa6.02□□□□□ -1.45
PDLIM3-207ENST00000512293 SERP1Q9Y6X1 66 aa6.02□□□□□ -1.45
PDLIM3-207ENST00000512293 KRTAP5-3Q6L8H2 238 aa6.01□□□□□ -1.45
PDLIM3-207ENST00000512293 COA5Q86WW8 74 aa5.97□□□□□ -1.45
PDLIM3-207ENST00000512293 C10orf95Q9H7T3 257 aa5.97□□□□□ -1.45
PDLIM3-207ENST00000512293 A0A1B0GU33 70 aa5.96□□□□□ -1.46
PDLIM3-207ENST00000512293 H7BZZ5 65 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms