RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 IGLV1-50A0A075B6I6 118 aa1.07□□□□□ -2.24
TRAPPC13-211ENST00000512009 K7EQZ3 153 aa1.07□□□□□ -2.24
TRAPPC13-211ENST00000512009 LCA10Q71F78 164 aa1.07□□□□□ -2.24
TRAPPC13-211ENST00000512009 CD164Q04900 197 aa1.07□□□□□ -2.24
TRAPPC13-211ENST00000512009 FAM229BQ4G0N7 80 aa1.07□□□□□ -2.24
TRAPPC13-211ENST00000512009 IGLV1-40P01703 118 aa1.06□□□□□ -2.24
TRAPPC13-211ENST00000512009 SPINK7P58062 85 aa1.06□□□□□ -2.24
TRAPPC13-211ENST00000512009 DEFB116Q30KQ4 102 aa1.06□□□□□ -2.24
TRAPPC13-211ENST00000512009 ST20-AS1Q8NBB2 130 aa1.06□□□□□ -2.24
TRAPPC13-211ENST00000512009 OBSCNQ5VST9 7968 aa1.06□□□□□ -2.24
TRAPPC13-211ENST00000512009 TRBV7-4A0A0J9YYF1 115 aa1.06□□□□□ -2.24
TRAPPC13-211ENST00000512009 LINC00242Q5T6M2 205 aa1.06□□□□□ -2.24
TRAPPC13-211ENST00000512009 ZNF861PO60384 105 aa1.06□□□□□ -2.24
TRAPPC13-211ENST00000512009 MACF1Q9UPN3 7388 aaKnown RBP1.06□□□□□ -2.24
TRAPPC13-211ENST00000512009 Q6ZRN7 208 aaPredicted RBP1.06□□□□□ -2.24
TRAPPC13-211ENST00000512009 PRR15Q8IV56 129 aa1.06□□□□□ -2.24
TRAPPC13-211ENST00000512009 NRGNQ92686 78 aa1.06□□□□□ -2.24
TRAPPC13-211ENST00000512009 A0A0D9SG42 100 aa1.06□□□□□ -2.24
TRAPPC13-211ENST00000512009 A0A1W2PNN7 141 aa1.06□□□□□ -2.24
TRAPPC13-211ENST00000512009 Q6ZRX8 168 aa1.06□□□□□ -2.24
TRAPPC13-211ENST00000512009 A0A087WYN8 130 aa1.05□□□□□ -2.24
TRAPPC13-211ENST00000512009 A0A1B0GU33 70 aa1.05□□□□□ -2.24
TRAPPC13-211ENST00000512009 KRTAP10-11P60412 298 aa1.05□□□□□ -2.24
TRAPPC13-211ENST00000512009 Q8N377 158 aa1.05□□□□□ -2.24
TRAPPC13-211ENST00000512009 Q6ZRU5 148 aa1.05□□□□□ -2.24
TRAPPC13-211ENST00000512009 MUC5ACP98088 5654 aa1.05□□□□□ -2.24
TRAPPC13-211ENST00000512009 P0C880 135 aa1.05□□□□□ -2.24
TRAPPC13-211ENST00000512009 KRTAP13-1Q8IUC0 172 aa1.05□□□□□ -2.24
TRAPPC13-211ENST00000512009 COA5Q86WW8 74 aa1.04□□□□□ -2.24
TRAPPC13-211ENST00000512009 A0A1B0GVX0 72 aa1.04□□□□□ -2.24
TRAPPC13-211ENST00000512009 Q5VSD8 79 aa1.03□□□□□ -2.24
TRAPPC13-211ENST00000512009 SMIM29Q86T20 159 aa1.03□□□□□ -2.24
TRAPPC13-211ENST00000512009 DEFB1P60022 68 aa1.03□□□□□ -2.24
TRAPPC13-211ENST00000512009 KRTAP6-3Q3LI67 103 aa1.03□□□□□ -2.24
TRAPPC13-211ENST00000512009 SPATA8Q6RVD6 105 aa1.03□□□□□ -2.24
TRAPPC13-211ENST00000512009 PRR26Q8N8Z3 221 aa1.03□□□□□ -2.24
TRAPPC13-211ENST00000512009 MUC12Q9UKN1 5478 aa1.03□□□□□ -2.24
TRAPPC13-211ENST00000512009 C9orf92A6NGG3 77 aa1.03□□□□□ -2.24
TRAPPC13-211ENST00000512009 SMR3BP02814 79 aaPredicted RBP1.03□□□□□ -2.25
TRAPPC13-211ENST00000512009 ROMO1P60602 79 aa1.03□□□□□ -2.25
TRAPPC13-211ENST00000512009 RPL37P61927 97 aaKnown RBP1.03□□□□□ -2.25
TRAPPC13-211ENST00000512009 Q5W150 140 aa1.03□□□□□ -2.25
TRAPPC13-211ENST00000512009 IGFL1Q6UW32 110 aa1.03□□□□□ -2.25
TRAPPC13-211ENST00000512009 C15orf56Q8N910 161 aa1.03□□□□□ -2.25
TRAPPC13-211ENST00000512009 KRTAP16-1A8MUX0 517 aa1.02□□□□□ -2.25
TRAPPC13-211ENST00000512009 KRTAP5-5Q701N2 237 aaPredicted RBP1.02□□□□□ -2.25
TRAPPC13-211ENST00000512009 GVQW2A0A096LPI5 108 aaPredicted RBP1.02□□□□□ -2.25
TRAPPC13-211ENST00000512009 DNAH10OSP0CZ25 163 aa1.02□□□□□ -2.25
TRAPPC13-211ENST00000512009 SPANXA2-OT1Q8N9U9 137 aa1.02□□□□□ -2.25
TRAPPC13-211ENST00000512009 PP632Q6XCG6 107 aa1.02□□□□□ -2.25
TRAPPC13-211ENST00000512009 A0A087WTM6 91 aa1.02□□□□□ -2.25
TRAPPC13-211ENST00000512009 PHF5AQ7RTV0 110 aaKnown RBP1.02□□□□□ -2.25
TRAPPC13-211ENST00000512009 KRTAP19-6Q3LI70 58 aa1.01□□□□□ -2.25
TRAPPC13-211ENST00000512009 LOC110117498A0A087WWA1 95 aa1.01□□□□□ -2.25
TRAPPC13-211ENST00000512009 M0QZ58 72 aa1.01□□□□□ -2.25
TRAPPC13-211ENST00000512009 LCE5AQ5TCM9 118 aa1.01□□□□□ -2.25
TRAPPC13-211ENST00000512009 DSCR10P59022 87 aa1.01□□□□□ -2.25
TRAPPC13-211ENST00000512009 SPRR1AP35321 89 aa1.01□□□□□ -2.25
TRAPPC13-211ENST00000512009 KRTAP10-8P60410 259 aa1.01□□□□□ -2.25
TRAPPC13-211ENST00000512009 PRR3P79522 188 aaKnown RBP1.01□□□□□ -2.25
TRAPPC13-211ENST00000512009 Q8N9P0 234 aaPredicted RBP1.01□□□□□ -2.25
TRAPPC13-211ENST00000512009 Q8N1X5 172 aa1□□□□□ -2.25
TRAPPC13-211ENST00000512009 KCNQ1DNQ9H478 68 aa1□□□□□ -2.25
TRAPPC13-211ENST00000512009 TNP1P09430 55 aa1□□□□□ -2.25
TRAPPC13-211ENST00000512009 C10orf99Q6UWK7 81 aa1□□□□□ -2.25
TRAPPC13-211ENST00000512009 KRTAP3-1Q9BYR8 98 aa1□□□□□ -2.25
TRAPPC13-211ENST00000512009 KRTAP1-5Q9BYS1 174 aa1□□□□□ -2.25
TRAPPC13-211ENST00000512009 K7EIL1 84 aa1□□□□□ -2.25
TRAPPC13-211ENST00000512009 KLKP1Q107X0 134 aa1□□□□□ -2.25
TRAPPC13-211ENST00000512009 SPRR4Q96PI1 79 aa0.99□□□□□ -2.25
TRAPPC13-211ENST00000512009 S4R3F8 94 aa0.99□□□□□ -2.25
TRAPPC13-211ENST00000512009 C4orf26Q17RF5 130 aa0.99□□□□□ -2.25
TRAPPC13-211ENST00000512009 CNBPP62633 177 aaKnown RBP0.99□□□□□ -2.25
TRAPPC13-211ENST00000512009 C18orf65Q6ZTR6 163 aa0.99□□□□□ -2.25
TRAPPC13-211ENST00000512009 C20orf166-AS1Q96NR2 134 aa0.99□□□□□ -2.25
TRAPPC13-211ENST00000512009 SMR3AQ99954 134 aa0.99□□□□□ -2.25
TRAPPC13-211ENST00000512009 PRO2289Q9P1D8 64 aa0.98□□□□□ -2.25
TRAPPC13-211ENST00000512009 SYNE1Q8NF91 8797 aaKnown RBP0.98□□□□□ -2.25
TRAPPC13-211ENST00000512009 OCR1Q9BZK8 76 aa0.98□□□□□ -2.25
TRAPPC13-211ENST00000512009 MMP24-AS1A0A0U1RRL7 71 aa0.97□□□□□ -2.25
TRAPPC13-211ENST00000512009 NOTCH2NLQ7Z3S9 236 aa0.97□□□□□ -2.25
TRAPPC13-211ENST00000512009 FAM168BA1KXE4 195 aa0.97□□□□□ -2.25
TRAPPC13-211ENST00000512009 KRTAP4-4Q9BYR3 166 aa0.97□□□□□ -2.25
TRAPPC13-211ENST00000512009 LINC01558Q9Y6Z2 57 aa0.96□□□□□ -2.26
TRAPPC13-211ENST00000512009 PANO1I0J062 215 aa0.96□□□□□ -2.26
TRAPPC13-211ENST00000512009 FSIP2Q5CZC0 6907 aa0.96□□□□□ -2.26
TRAPPC13-211ENST00000512009 SPRR1BP22528 89 aa0.96□□□□□ -2.26
TRAPPC13-211ENST00000512009 KRTAP5-8O75690 187 aa0.95□□□□□ -2.26
TRAPPC13-211ENST00000512009 CASC10Q5T4H9 136 aa0.95□□□□□ -2.26
TRAPPC13-211ENST00000512009 KRTAP5-10Q6L8G5 202 aa0.95□□□□□ -2.26
TRAPPC13-211ENST00000512009 KRTAP9-3Q9BYQ3 159 aa0.95□□□□□ -2.26
TRAPPC13-211ENST00000512009 ADM2Q7Z4H4 148 aa0.95□□□□□ -2.26
TRAPPC13-211ENST00000512009 SYNE2Q8WXH0 6885 aaKnown RBP0.95□□□□□ -2.26
TRAPPC13-211ENST00000512009 KRTAP5-11Q6L8G4 156 aa0.95□□□□□ -2.26
TRAPPC13-211ENST00000512009 KRTAP1-4P0C5Y4 121 aa0.95□□□□□ -2.26
TRAPPC13-211ENST00000512009 A0A087X002 238 aa0.94□□□□□ -2.26
TRAPPC13-211ENST00000512009 RPS29P62273 56 aaKnown RBP0.94□□□□□ -2.26
TRAPPC13-211ENST00000512009 SPRR5A0A1B0GTR4 108 aa0.94□□□□□ -2.26
TRAPPC13-211ENST00000512009 KRTAP20-1Q3LI63 56 aa0.94□□□□□ -2.26
TRAPPC13-211ENST00000512009 Q75L30 129 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms