RNA–Protein interactions for RNA: ENST00000511171.5

LEMD2-209, Transcript of LEM domain containing 2, humanhuman

TSL 2

Gene LEMD2, Length 4,870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-209ENST00000511171 MT1HL1P0DM35 61 aa6.32□□□□□ -1.4
LEMD2-209ENST00000511171 C10orf95Q9H7T3 257 aa6.32□□□□□ -1.4
LEMD2-209ENST00000511171 KMT2AQ03164 3969 aa6.3□□□□□ -1.4
LEMD2-209ENST00000511171 DNAH2Q9P225 4427 aa6.27□□□□□ -1.41
LEMD2-209ENST00000511171 LYSTQ99698 3801 aa6.27□□□□□ -1.41
LEMD2-209ENST00000511171 LRP1BQ9NZR2 4599 aa6.24□□□□□ -1.41
LEMD2-209ENST00000511171 DNAH8Q96JB1 4490 aa6.23□□□□□ -1.41
LEMD2-209ENST00000511171 FAT1Q14517 4588 aa6.23□□□□□ -1.41
LEMD2-209ENST00000511171 DYNC1H1Q14204 4646 aaKnown RBP6.22□□□□□ -1.41
LEMD2-209ENST00000511171 KRTAP10-6P60371 365 aaPredicted RBP6.19□□□□□ -1.42
LEMD2-209ENST00000511171 KRTAP4-5Q9BYR2 181 aa6.19□□□□□ -1.42
LEMD2-209ENST00000511171 KRTAP12-2P59991 146 aa6.18□□□□□ -1.42
LEMD2-209ENST00000511171 KRTAP13-4Q3LI77 160 aa6.17□□□□□ -1.42
LEMD2-209ENST00000511171 DYNC2H1Q8NCM8 4307 aaKnown RBP6.16□□□□□ -1.42
LEMD2-209ENST00000511171 DNAH7Q8WXX0 4024 aa6.15□□□□□ -1.43
LEMD2-209ENST00000511171 KRTAP3-3Q9BYR6 98 aa6.13□□□□□ -1.43
LEMD2-209ENST00000511171 KRTAP12-1P59990 96 aa6.11□□□□□ -1.43
LEMD2-209ENST00000511171 KRTAP10-10P60014 251 aa6.06□□□□□ -1.44
LEMD2-209ENST00000511171 FRAS1Q86XX4 4008 aa6.06□□□□□ -1.44
LEMD2-209ENST00000511171 KRTAP3-2Q9BYR7 98 aa6.06□□□□□ -1.44
LEMD2-209ENST00000511171 HECTD4Q9Y4D8 3996 aa6.05□□□□□ -1.44
LEMD2-209ENST00000511171 VPS13BQ7Z7G8 4022 aa6.05□□□□□ -1.44
LEMD2-209ENST00000511171 DNAH6Q9C0G6 4158 aa6.05□□□□□ -1.44
LEMD2-209ENST00000511171 SACSQ9NZJ4 4579 aa6.01□□□□□ -1.45
LEMD2-209ENST00000511171 FAT2Q9NYQ8 4349 aa6.01□□□□□ -1.45
LEMD2-209ENST00000511171 PRO2289Q9P1D8 64 aa5.97□□□□□ -1.45
LEMD2-209ENST00000511171 HYDINQ4G0P3 5121 aa5.95□□□□□ -1.46
LEMD2-209ENST00000511171 RYR1P21817 5038 aa5.95□□□□□ -1.46
LEMD2-209ENST00000511171 KIAA1109Q2LD37 5005 aa5.92□□□□□ -1.46
LEMD2-209ENST00000511171 KRTAP15-1Q3LI76 137 aa5.89□□□□□ -1.47
LEMD2-209ENST00000511171 MYCBP2O75592 4640 aa5.89□□□□□ -1.47
LEMD2-209ENST00000511171 APOBP04114 4563 aaKnown RBP5.88□□□□□ -1.47
LEMD2-209ENST00000511171 RYR3Q15413 4870 aa5.84□□□□□ -1.47
LEMD2-209ENST00000511171 LRP1Q07954 4544 aaKnown RBP5.84□□□□□ -1.47
LEMD2-209ENST00000511171 PKHD1P08F94 4074 aa5.83□□□□□ -1.48
LEMD2-209ENST00000511171 RYR2Q92736 4967 aa5.81□□□□□ -1.48
LEMD2-209ENST00000511171 KRTAP17-1Q9BYP8 105 aa5.79□□□□□ -1.48
LEMD2-209ENST00000511171 LORP23490 312 aaPredicted RBP5.75□□□□□ -1.49
LEMD2-209ENST00000511171 KRTAP4-1Q9BYQ7 146 aa5.74□□□□□ -1.49
LEMD2-209ENST00000511171 FAT3Q8TDW7 4589 aa5.71□□□□□ -1.5
LEMD2-209ENST00000511171 PKD1P98161 4303 aa5.7□□□□□ -1.5
LEMD2-209ENST00000511171 INE1O15225 51 aa5.65□□□□□ -1.5
LEMD2-209ENST00000511171 KMT2CQ8NEZ4 4911 aaKnown RBP5.65□□□□□ -1.5
LEMD2-209ENST00000511171 HSPG2P98160 4391 aa5.59□□□□□ -1.51
LEMD2-209ENST00000511171 KRTAP23-1A1A580 65 aa5.56□□□□□ -1.52
LEMD2-209ENST00000511171 LRP2P98164 4655 aa5.53□□□□□ -1.52
LEMD2-209ENST00000511171 HERC2O95714 4834 aa5.5□□□□□ -1.53
LEMD2-209ENST00000511171 MT1HP80294 61 aa5.39□□□□□ -1.55
LEMD2-209ENST00000511171 PKHD1L1Q86WI1 4243 aa5.36□□□□□ -1.55
LEMD2-209ENST00000511171 KRTAP10-12P60413 245 aa5.36□□□□□ -1.55
LEMD2-209ENST00000511171 LPAP08519 4548 aa5.36□□□□□ -1.55
LEMD2-209ENST00000511171 TNXBP22105 4242 aa5.36□□□□□ -1.55
LEMD2-209ENST00000511171 EPPK1P58107 5090 aaKnown RBP5.35□□□□□ -1.55
LEMD2-209ENST00000511171 LCE3AQ5TA76 89 aa5.32□□□□□ -1.56
LEMD2-209ENST00000511171 BIRC6Q9NR09 4857 aa5.31□□□□□ -1.56
LEMD2-209ENST00000511171 MT2AP02795 61 aa5.31□□□□□ -1.56
LEMD2-209ENST00000511171 SPRR2GQ9BYE4 73 aa5.27□□□□□ -1.57
LEMD2-209ENST00000511171 MT1FP04733 61 aa5.26□□□□□ -1.57
LEMD2-209ENST00000511171 ABCA13Q86UQ4 5058 aa5.24□□□□□ -1.57
LEMD2-209ENST00000511171 KRTAP12-3P60328 96 aa5.24□□□□□ -1.57
LEMD2-209ENST00000511171 HERC1Q15751 4861 aa5.16□□□□□ -1.58
LEMD2-209ENST00000511171 KRTAP19-1Q8IUB9 90 aa5.13□□□□□ -1.59
LEMD2-209ENST00000511171 PCLOQ9Y6V0 5065 aa5.1□□□□□ -1.59
LEMD2-209ENST00000511171 LCE2CQ5TA81 110 aa5.09□□□□□ -1.6
LEMD2-209ENST00000511171 KRTAP19-2Q3LHN2 52 aa5.06□□□□□ -1.6
LEMD2-209ENST00000511171 MUC17Q685J3 4493 aa5□□□□□ -1.61
LEMD2-209ENST00000511171 KRTAP9-8Q9BYQ0 159 aa4.98□□□□□ -1.61
LEMD2-209ENST00000511171 KRTAP19-8Q3LI54 63 aa4.97□□□□□ -1.61
LEMD2-209ENST00000511171 FLGP20930 4061 aaPredicted RBP4.95□□□□□ -1.62
LEMD2-209ENST00000511171 KRTAP8-1Q8IUC2 63 aa4.91□□□□□ -1.62
LEMD2-209ENST00000511171 CRCT1Q9UGL9 99 aa4.91□□□□□ -1.62
LEMD2-209ENST00000511171 MT1BP07438 61 aa4.9□□□□□ -1.62
LEMD2-209ENST00000511171 MUC2Q02817 5179 aa4.88□□□□□ -1.63
LEMD2-209ENST00000511171 MT1XP80297 61 aa4.88□□□□□ -1.63
LEMD2-209ENST00000511171 KRTAP10-7P60409 375 aaPredicted RBP4.88□□□□□ -1.63
LEMD2-209ENST00000511171 KRTAP10-5P60370 271 aa4.85□□□□□ -1.63
LEMD2-209ENST00000511171 KRTAP19-5Q3LI72 72 aa4.85□□□□□ -1.63
LEMD2-209ENST00000511171 RNF213Q63HN8 5207 aa4.84□□□□□ -1.63
LEMD2-209ENST00000511171 KRTAP9-3Q9BYQ3 159 aa4.82□□□□□ -1.64
LEMD2-209ENST00000511171 KRTAP19-4Q3LI73 84 aa4.8□□□□□ -1.64
LEMD2-209ENST00000511171 HMCN2Q8NDA2 5059 aa4.8□□□□□ -1.64
LEMD2-209ENST00000511171 FAT4Q6V0I7 4981 aa4.79□□□□□ -1.64
LEMD2-209ENST00000511171 UBR4Q5T4S7 5183 aa4.75□□□□□ -1.65
LEMD2-209ENST00000511171 SPRR5A0A1B0GTR4 108 aa4.74□□□□□ -1.65
LEMD2-209ENST00000511171 LCE3CQ5T5A8 94 aa4.7□□□□□ -1.66
LEMD2-209ENST00000511171 LCE2BO14633 110 aa4.66□□□□□ -1.66
LEMD2-209ENST00000511171 KRTAP4-8A0A0G2JLE6 195 aa4.65□□□□□ -1.66
LEMD2-209ENST00000511171 KRTAP4-8Q9BYQ9 185 aa4.65□□□□□ -1.66
LEMD2-209ENST00000511171 SPRR2FQ96RM1 72 aa4.58□□□□□ -1.68
LEMD2-209ENST00000511171 FSIP2Q5CZC0 6907 aa4.54□□□□□ -1.68
LEMD2-209ENST00000511171 LCE2AQ5TA79 106 aaPredicted RBP4.45□□□□□ -1.7
LEMD2-209ENST00000511171 KRTAP4-7Q9BYR0 210 aa4.38□□□□□ -1.71
LEMD2-209ENST00000511171 MT1GP13640 62 aa4.34□□□□□ -1.71
LEMD2-209ENST00000511171 MT1LQ93083 61 aa4.32□□□□□ -1.72
LEMD2-209ENST00000511171 MT1EP04732 61 aa4.32□□□□□ -1.72
LEMD2-209ENST00000511171 KRTAP19-6Q3LI70 58 aa4.27□□□□□ -1.73
LEMD2-209ENST00000511171 KRTAP19-7Q3SYF9 63 aa4.23□□□□□ -1.73
LEMD2-209ENST00000511171 KRTAP19-3Q7Z4W3 81 aa4.23□□□□□ -1.73
LEMD2-209ENST00000511171 SPRR2EP22531 72 aa4.22□□□□□ -1.73
LEMD2-209ENST00000511171 SPRR2BP35325 72 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms