RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 C7orf65Q6ZTY9 151 aa2.11□□□□□ -2.07
USP53-206ENST00000510737 P0C880 135 aa2.1□□□□□ -2.07
USP53-206ENST00000510737 FABP2P12104 132 aa2.1□□□□□ -2.07
USP53-206ENST00000510737 MT1GP13640 62 aa2.1□□□□□ -2.07
USP53-206ENST00000510737 BVES-AS1Q5T3Y7 98 aa2.1□□□□□ -2.07
USP53-206ENST00000510737 TMEM218A2RU14 115 aa2.09□□□□□ -2.07
USP53-206ENST00000510737 J3KT08 172 aa2.09□□□□□ -2.07
USP53-206ENST00000510737 TRACP01848 142 aa2.09□□□□□ -2.07
USP53-206ENST00000510737 CCKP06307 115 aa2.09□□□□□ -2.07
USP53-206ENST00000510737 SMIM26A0A096LP01 95 aa2.08□□□□□ -2.08
USP53-206ENST00000510737 A0A1B0GV72 72 aa2.08□□□□□ -2.08
USP53-206ENST00000510737 NDUFB1O75438 58 aa2.08□□□□□ -2.08
USP53-206ENST00000510737 C1orf64Q8NEQ6 169 aa2.08□□□□□ -2.08
USP53-206ENST00000510737 MT1MQ8N339 61 aa2.07□□□□□ -2.08
USP53-206ENST00000510737 MRPL34Q9BQ48 92 aaKnown RBP2.07□□□□□ -2.08
USP53-206ENST00000510737 A0A087WVE0 104 aa2.06□□□□□ -2.08
USP53-206ENST00000510737 SYS1-DBNDD2H3BUS1 97 aa2.06□□□□□ -2.08
USP53-206ENST00000510737 SYNE1Q8NF91 8797 aaKnown RBP2.05□□□□□ -2.08
USP53-206ENST00000510737 K7EQZ3 153 aa2.05□□□□□ -2.08
USP53-206ENST00000510737 LINC01545Q5VT33 79 aa2.04□□□□□ -2.08
USP53-206ENST00000510737 TMEM254Q8TBM7 123 aa2.04□□□□□ -2.08
USP53-206ENST00000510737 MMP24-AS1A0A0U1RRL7 71 aa2.03□□□□□ -2.08
USP53-206ENST00000510737 H0YGX0 51 aa2.03□□□□□ -2.08
USP53-206ENST00000510737 NDUFS5O43920 106 aa2.03□□□□□ -2.08
USP53-206ENST00000510737 SNCGO76070 127 aa2.03□□□□□ -2.08
USP53-206ENST00000510737 VPS25Q9BRG1 176 aa2.03□□□□□ -2.08
USP53-206ENST00000510737 ADM2Q7Z4H4 148 aa2.02□□□□□ -2.09
USP53-206ENST00000510737 YPEL4Q96NS1 127 aa2.02□□□□□ -2.09
USP53-206ENST00000510737 Q6ZQT0 140 aa2.01□□□□□ -2.09
USP53-206ENST00000510737 A0A1B0GX51 115 aa1.99□□□□□ -2.09
USP53-206ENST00000510737 hDV103S1A0JD37 113 aa1.99□□□□□ -2.09
USP53-206ENST00000510737 SPANXA2-OT1Q8N9U9 137 aa1.98□□□□□ -2.09
USP53-206ENST00000510737 PSPHP1O15172 72 aa1.97□□□□□ -2.09
USP53-206ENST00000510737 CLLU1Q5K131 121 aa1.97□□□□□ -2.09
USP53-206ENST00000510737 SPINT4Q6UDR6 99 aa1.97□□□□□ -2.09
USP53-206ENST00000510737 R4GN34 69 aa1.97□□□□□ -2.09
USP53-206ENST00000510737 KRTAP19-5Q3LI72 72 aa1.96□□□□□ -2.1
USP53-206ENST00000510737 LINC01554Q52M75 96 aa1.96□□□□□ -2.1
USP53-206ENST00000510737 MT1LQ93083 61 aa1.96□□□□□ -2.1
USP53-206ENST00000510737 TMEM256-PLSCR3K7ERE1 68 aa1.95□□□□□ -2.1
USP53-206ENST00000510737 M0QZ58 72 aa1.95□□□□□ -2.1
USP53-206ENST00000510737 PSMB2P49721 201 aa1.95□□□□□ -2.1
USP53-206ENST00000510737 LUZP6Q538Z0 58 aa1.95□□□□□ -2.1
USP53-206ENST00000510737 ATOH7Q8N100 152 aa1.95□□□□□ -2.1
USP53-206ENST00000510737 ORMDL1Q9P0S3 153 aa1.95□□□□□ -2.1
USP53-206ENST00000510737 HCG22E2RYF7 251 aa1.93□□□□□ -2.1
USP53-206ENST00000510737 H3BQ85 93 aa1.92□□□□□ -2.1
USP53-206ENST00000510737 C9JAW5 83 aa1.91□□□□□ -2.1
USP53-206ENST00000510737 NDUFC1O43677 76 aa1.91□□□□□ -2.1
USP53-206ENST00000510737 APOC3P02656 99 aa1.91□□□□□ -2.1
USP53-206ENST00000510737 KRTDAPP60985 99 aa1.91□□□□□ -2.1
USP53-206ENST00000510737 FAM240AA0A1B0GVK7 77 aa1.89□□□□□ -2.11
USP53-206ENST00000510737 DNAL4O96015 105 aa1.89□□□□□ -2.11
USP53-206ENST00000510737 A0A0B4J2C4 111 aa1.88□□□□□ -2.11
USP53-206ENST00000510737 PRO0628Q9UI54 55 aa1.88□□□□□ -2.11
USP53-206ENST00000510737 NREPQ16612 68 aa1.87□□□□□ -2.11
USP53-206ENST00000510737 V9GYY9 64 aa1.87□□□□□ -2.11
USP53-206ENST00000510737 A0A1B0GW54 56 aa1.86□□□□□ -2.11
USP53-206ENST00000510737 CASC2Q6XLA1 102 aa1.86□□□□□ -2.11
USP53-206ENST00000510737 SVBPQ8N300 66 aa1.86□□□□□ -2.11
USP53-206ENST00000510737 PRO1854Q9UHT4 67 aa1.85□□□□□ -2.11
USP53-206ENST00000510737 A0A0D9SG42 100 aa1.83□□□□□ -2.12
USP53-206ENST00000510737 K7EP34 96 aa1.83□□□□□ -2.12
USP53-206ENST00000510737 HIST1H2BKO60814 126 aa1.83□□□□□ -2.12
USP53-206ENST00000510737 HIST1H2BJP06899 126 aa1.83□□□□□ -2.12
USP53-206ENST00000510737 HIST1H2BOP23527 126 aa1.83□□□□□ -2.12
USP53-206ENST00000510737 HIST1H2BBP33778 126 aa1.83□□□□□ -2.12
USP53-206ENST00000510737 HIST1H2BDP58876 126 aa1.83□□□□□ -2.12
USP53-206ENST00000510737 HIST1H2BCP62807 126 aa1.83□□□□□ -2.12
USP53-206ENST00000510737 HIST2H2BEQ16778 126 aa1.83□□□□□ -2.12
USP53-206ENST00000510737 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.83□□□□□ -2.12
USP53-206ENST00000510737 HIST1H2BHQ93079 126 aa1.83□□□□□ -2.12
USP53-206ENST00000510737 HIST1H2BNQ99877 126 aa1.83□□□□□ -2.12
USP53-206ENST00000510737 HIST1H2BMQ99879 126 aa1.83□□□□□ -2.12
USP53-206ENST00000510737 BATFQ16520 125 aa1.82□□□□□ -2.12
USP53-206ENST00000510737 C20orf197Q8N268 126 aa1.82□□□□□ -2.12
USP53-206ENST00000510737 CYP4F30PQ9H0H9 118 aa1.82□□□□□ -2.12
USP53-206ENST00000510737 LOC110117498A0A087WWA1 95 aa1.81□□□□□ -2.12
USP53-206ENST00000510737 A0A1W2PPM0 123 aa1.81□□□□□ -2.12
USP53-206ENST00000510737 K7ERS5 55 aa1.81□□□□□ -2.12
USP53-206ENST00000510737 BAALC-AS2P0C853 105 aa1.81□□□□□ -2.12
USP53-206ENST00000510737 SCGB1C2P0DMR2 95 aa1.81□□□□□ -2.12
USP53-206ENST00000510737 NDUFA5Q16718 116 aa1.8□□□□□ -2.12
USP53-206ENST00000510737 HIST3H2BBQ8N257 126 aa1.8□□□□□ -2.12
USP53-206ENST00000510737 ANAPC13Q9BS18 74 aa1.8□□□□□ -2.12
USP53-206ENST00000510737 MT-ATP8P03928 68 aa1.78□□□□□ -2.12
USP53-206ENST00000510737 HSBP1L1C9JCN9 74 aa1.77□□□□□ -2.13
USP53-206ENST00000510737 COX8AP10176 69 aa1.77□□□□□ -2.13
USP53-206ENST00000510737 JMJD7-PLA2G4BH0Y9G9 81 aa1.76□□□□□ -2.13
USP53-206ENST00000510737 DLEU1O43261 78 aa1.76□□□□□ -2.13
USP53-206ENST00000510737 COX6CP09669 75 aa1.76□□□□□ -2.13
USP53-206ENST00000510737 FXYD2P54710 66 aa1.76□□□□□ -2.13
USP53-206ENST00000510737 NAA38Q9BRA0 125 aaKnown RBP1.76□□□□□ -2.13
USP53-206ENST00000510737 C14orf132Q9NPU4 83 aa1.76□□□□□ -2.13
USP53-206ENST00000510737 HIST1H2BLQ99880 126 aa1.75□□□□□ -2.13
USP53-206ENST00000510737 HIGD1BQ9P298 99 aa1.75□□□□□ -2.13
USP53-206ENST00000510737 ACYP1P07311 99 aa1.74□□□□□ -2.13
USP53-206ENST00000510737 K7ERJ3 54 aa1.73□□□□□ -2.13
USP53-206ENST00000510737 S100A2P29034 98 aa1.73□□□□□ -2.13
USP53-206ENST00000510737 C14orf144Q96I85 54 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms