RNA–Protein interactions for RNA: ENST00000510557.5

LIN54-209, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 2 BASIC

Gene LIN54, Length 2,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-209ENST00000510557 TPRXLQ17RH7 258 aa9.99□□□□□ -0.81
LIN54-209ENST00000510557 KRTAP10-8P60410 259 aa9.94□□□□□ -0.82
LIN54-209ENST00000510557 A0A0D9SG42 100 aa9.89□□□□□ -0.83
LIN54-209ENST00000510557 KRTAP10-6P60371 365 aaPredicted RBP9.87□□□□□ -0.83
LIN54-209ENST00000510557 KRTAP15-1Q3LI76 137 aa9.86□□□□□ -0.83
LIN54-209ENST00000510557 KRTAP13-4Q3LI77 160 aa9.86□□□□□ -0.83
LIN54-209ENST00000510557 FAT3Q8TDW7 4589 aa9.86□□□□□ -0.83
LIN54-209ENST00000510557 NDUFAF8A1L188 74 aa9.86□□□□□ -0.83
LIN54-209ENST00000510557 RYR2Q92736 4967 aa9.84□□□□□ -0.83
LIN54-209ENST00000510557 C10orf95Q9H7T3 257 aa9.84□□□□□ -0.83
LIN54-209ENST00000510557 Q5VSD8 79 aa9.83□□□□□ -0.84
LIN54-209ENST00000510557 XP32Q5T750 250 aa9.79□□□□□ -0.84
LIN54-209ENST00000510557 TNXBP22105 4242 aa9.78□□□□□ -0.84
LIN54-209ENST00000510557 KRTAP3-3Q9BYR6 98 aa9.76□□□□□ -0.85
LIN54-209ENST00000510557 S4R3F8 94 aa9.75□□□□□ -0.85
LIN54-209ENST00000510557 KRTAP3-2Q9BYR7 98 aa9.74□□□□□ -0.85
LIN54-209ENST00000510557 LRP1Q07954 4544 aaKnown RBP9.68□□□□□ -0.86
LIN54-209ENST00000510557 KMT2CQ8NEZ4 4911 aaKnown RBP9.63□□□□□ -0.87
LIN54-209ENST00000510557 HSPG2P98160 4391 aa9.62□□□□□ -0.87
LIN54-209ENST00000510557 KRTAP12-2P59991 146 aa9.61□□□□□ -0.87
LIN54-209ENST00000510557 DMBT1Q9UGM3 2413 aaPredicted RBP9.58□□□□□ -0.88
LIN54-209ENST00000510557 MT1HL1P0DM35 61 aa9.54□□□□□ -0.88
LIN54-209ENST00000510557 KRTAP12-1P59990 96 aa9.51□□□□□ -0.89
LIN54-209ENST00000510557 RYR1P21817 5038 aa9.48□□□□□ -0.89
LIN54-209ENST00000510557 KRTAP17-1Q9BYP8 105 aa9.43□□□□□ -0.9
LIN54-209ENST00000510557 MYCBP2O75592 4640 aa9.42□□□□□ -0.9
LIN54-209ENST00000510557 M0QZ58 72 aa9.35□□□□□ -0.91
LIN54-209ENST00000510557 RYR3Q15413 4870 aa9.31□□□□□ -0.92
LIN54-209ENST00000510557 A0A0A0MQY5 61 aa9.27□□□□□ -0.93
LIN54-209ENST00000510557 KIAA1109Q2LD37 5005 aa9.23□□□□□ -0.93
LIN54-209ENST00000510557 LPAP08519 4548 aa9.2□□□□□ -0.94
LIN54-209ENST00000510557 LRP2P98164 4655 aa9.18□□□□□ -0.94
LIN54-209ENST00000510557 PLAC4Q8WY50 150 aa9.16□□□□□ -0.94
LIN54-209ENST00000510557 LUZP6Q538Z0 58 aa9.15□□□□□ -0.94
LIN54-209ENST00000510557 SEC61BP60468 96 aaKnown RBP9.14□□□□□ -0.95
LIN54-209ENST00000510557 R4GN34 69 aa9.05□□□□□ -0.96
LIN54-209ENST00000510557 KRTAP4-5Q9BYR2 181 aa8.96□□□□□ -0.97
LIN54-209ENST00000510557 EPPK1P58107 5090 aaKnown RBP8.95□□□□□ -0.98
LIN54-209ENST00000510557 ABCA13Q86UQ4 5058 aa8.92□□□□□ -0.98
LIN54-209ENST00000510557 J3QL48 77 aa8.88□□□□□ -0.99
LIN54-209ENST00000510557 MUC17Q685J3 4493 aa8.88□□□□□ -0.99
LIN54-209ENST00000510557 KRTAP4-1Q9BYQ7 146 aa8.82□□□□□ -1
LIN54-209ENST00000510557 PP632Q6XCG6 107 aa8.82□□□□□ -1
LIN54-209ENST00000510557 LORP23490 312 aaPredicted RBP8.78□□□□□ -1
LIN54-209ENST00000510557 KRTAP19-2Q3LHN2 52 aa8.73□□□□□ -1.01
LIN54-209ENST00000510557 CAMK2N1Q7Z7J9 78 aa8.6□□□□□ -1.03
LIN54-209ENST00000510557 HERC2O95714 4834 aa8.53□□□□□ -1.04
LIN54-209ENST00000510557 SPRR5A0A1B0GTR4 108 aa8.42□□□□□ -1.06
LIN54-209ENST00000510557 FLGP20930 4061 aaPredicted RBP8.41□□□□□ -1.06
LIN54-209ENST00000510557 BIRC6Q9NR09 4857 aa8.4□□□□□ -1.06
LIN54-209ENST00000510557 KRTAP23-1A1A580 65 aa8.35□□□□□ -1.07
LIN54-209ENST00000510557 TNP1P09430 55 aa8.34□□□□□ -1.07
LIN54-209ENST00000510557 HERC1Q15751 4861 aa8.28□□□□□ -1.08
LIN54-209ENST00000510557 MUC2Q02817 5179 aa8.27□□□□□ -1.09
LIN54-209ENST00000510557 LCE2CQ5TA81 110 aa8.17□□□□□ -1.1
LIN54-209ENST00000510557 SPRR2GQ9BYE4 73 aa8.17□□□□□ -1.1
LIN54-209ENST00000510557 PRO2289Q9P1D8 64 aa8.12□□□□□ -1.11
LIN54-209ENST00000510557 HMCN2Q8NDA2 5059 aa8.1□□□□□ -1.11
LIN54-209ENST00000510557 PCLOQ9Y6V0 5065 aa8.09□□□□□ -1.11
LIN54-209ENST00000510557 M0R2T5 61 aa8.06□□□□□ -1.12
LIN54-209ENST00000510557 KRTAP19-1Q8IUB9 90 aa8.04□□□□□ -1.12
LIN54-209ENST00000510557 MT1HP80294 61 aa7.98□□□□□ -1.13
LIN54-209ENST00000510557 INE1O15225 51 aa7.94□□□□□ -1.14
LIN54-209ENST00000510557 FAT4Q6V0I7 4981 aa7.9□□□□□ -1.15
LIN54-209ENST00000510557 KRTAP10-10P60014 251 aa7.9□□□□□ -1.15
LIN54-209ENST00000510557 MT2AP02795 61 aa7.86□□□□□ -1.15
LIN54-209ENST00000510557 MT1FP04733 61 aa7.84□□□□□ -1.15
LIN54-209ENST00000510557 LCE3AQ5TA76 89 aa7.8□□□□□ -1.16
LIN54-209ENST00000510557 KRTAP9-8Q9BYQ0 159 aa7.8□□□□□ -1.16
LIN54-209ENST00000510557 KRTAP19-8Q3LI54 63 aa7.78□□□□□ -1.16
LIN54-209ENST00000510557 RNF213Q63HN8 5207 aa7.7□□□□□ -1.18
LIN54-209ENST00000510557 KRTAP8-1Q8IUC2 63 aa7.65□□□□□ -1.18
LIN54-209ENST00000510557 MT1BP07438 61 aa7.61□□□□□ -1.19
LIN54-209ENST00000510557 UBR4Q5T4S7 5183 aa7.6□□□□□ -1.19
LIN54-209ENST00000510557 KRTAP10-5P60370 271 aa7.6□□□□□ -1.19
LIN54-209ENST00000510557 MT1XP80297 61 aa7.58□□□□□ -1.2
LIN54-209ENST00000510557 KRTAP10-12P60413 245 aa7.5□□□□□ -1.21
LIN54-209ENST00000510557 KRTAP9-3Q9BYQ3 159 aa7.48□□□□□ -1.21
LIN54-209ENST00000510557 KRTAP12-3P60328 96 aa7.45□□□□□ -1.22
LIN54-209ENST00000510557 KRTAP10-7P60409 375 aaPredicted RBP7.34□□□□□ -1.24
LIN54-209ENST00000510557 LCE2BO14633 110 aa7.12□□□□□ -1.27
LIN54-209ENST00000510557 KRTAP19-5Q3LI72 72 aa7.07□□□□□ -1.28
LIN54-209ENST00000510557 LCE3CQ5T5A8 94 aa7.03□□□□□ -1.28
LIN54-209ENST00000510557 LCE2AQ5TA79 106 aaPredicted RBP6.98□□□□□ -1.29
LIN54-209ENST00000510557 LCE2DQ5TA82 110 aaPredicted RBP6.94□□□□□ -1.3
LIN54-209ENST00000510557 KRTAP19-4Q3LI73 84 aa6.84□□□□□ -1.31
LIN54-209ENST00000510557 KRTAP4-8A0A0G2JLE6 195 aa6.83□□□□□ -1.32
LIN54-209ENST00000510557 KRTAP4-8Q9BYQ9 185 aa6.83□□□□□ -1.32
LIN54-209ENST00000510557 KRTAP2-3P0C7H8 128 aa6.78□□□□□ -1.32
LIN54-209ENST00000510557 KRTAP2-4Q9BYR9 128 aa6.78□□□□□ -1.32
LIN54-209ENST00000510557 KRTAP2-1Q9BYU5 128 aa6.78□□□□□ -1.32
LIN54-209ENST00000510557 KRTAP9-6A8MVA2 160 aa6.77□□□□□ -1.33
LIN54-209ENST00000510557 USH2AO75445 5202 aa6.75□□□□□ -1.33
LIN54-209ENST00000510557 KRTAP19-7Q3SYF9 63 aa6.74□□□□□ -1.33
LIN54-209ENST00000510557 KMT2DO14686 5537 aa6.69□□□□□ -1.34
LIN54-209ENST00000510557 MT1EP04732 61 aa6.57□□□□□ -1.36
LIN54-209ENST00000510557 MT1LQ93083 61 aa6.57□□□□□ -1.36
LIN54-209ENST00000510557 KRTAP4-7Q9BYR0 210 aa6.52□□□□□ -1.37
LIN54-209ENST00000510557 KRTAP19-6Q3LI70 58 aa6.46□□□□□ -1.38
LIN54-209ENST00000510557 SSPOA2VEC9 5147 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms