RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 ATOX1O00244 68 aa8.37□□□□□ -1.07
LSM6-206ENST00000510331 SPRR2GQ9BYE4 73 aa8.35□□□□□ -1.07
LSM6-206ENST00000510331 MT1BP07438 61 aa8.34□□□□□ -1.07
LSM6-206ENST00000510331 KLKP1Q107X0 134 aa8.33□□□□□ -1.08
LSM6-206ENST00000510331 KRTAP19-8Q3LI54 63 aa8.3□□□□□ -1.08
LSM6-206ENST00000510331 Q5VV11 94 aa8.3□□□□□ -1.08
LSM6-206ENST00000510331 LINC00208Q96KT6 92 aa8.26□□□□□ -1.09
LSM6-206ENST00000510331 OCR1Q9BZK8 76 aa8.26□□□□□ -1.09
LSM6-206ENST00000510331 A6NN06 94 aa8.21□□□□□ -1.1
LSM6-206ENST00000510331 NDUFC1O43677 76 aa8.21□□□□□ -1.1
LSM6-206ENST00000510331 A8MUN3 132 aa8.19□□□□□ -1.1
LSM6-206ENST00000510331 MP68P56378 58 aa8.19□□□□□ -1.1
LSM6-206ENST00000510331 IMUPQ9GZP8 106 aa8.18□□□□□ -1.1
LSM6-206ENST00000510331 CRIPTQ9P021 101 aa8.16□□□□□ -1.1
LSM6-206ENST00000510331 J3QR89 54 aa8.15□□□□□ -1.1
LSM6-206ENST00000510331 H0YAA0 97 aa8.14□□□□□ -1.11
LSM6-206ENST00000510331 KRTAP6-3Q3LI67 103 aa8.14□□□□□ -1.11
LSM6-206ENST00000510331 KRTAP10-5P60370 271 aa8.12□□□□□ -1.11
LSM6-206ENST00000510331 ADM2Q7Z4H4 148 aa8.09□□□□□ -1.11
LSM6-206ENST00000510331 H3BPC8 53 aa8.06□□□□□ -1.12
LSM6-206ENST00000510331 SCGB1A1P11684 91 aa8.04□□□□□ -1.12
LSM6-206ENST00000510331 DMAC1Q96GE9 116 aa8.02□□□□□ -1.13
LSM6-206ENST00000510331 NEBP20929 6669 aa8.01□□□□□ -1.13
LSM6-206ENST00000510331 MT-ATP8P03928 68 aa7.95□□□□□ -1.14
LSM6-206ENST00000510331 MUC12Q9UKN1 5478 aa7.94□□□□□ -1.14
LSM6-206ENST00000510331 P0C880 135 aa7.93□□□□□ -1.14
LSM6-206ENST00000510331 R4GN34 69 aa7.87□□□□□ -1.15
LSM6-206ENST00000510331 K7ERU9 68 aa7.86□□□□□ -1.15
LSM6-206ENST00000510331 C20orf197Q8N268 126 aa7.85□□□□□ -1.15
LSM6-206ENST00000510331 M0QZ58 72 aa7.84□□□□□ -1.15
LSM6-206ENST00000510331 TRAV7A0A075B6U4 112 aa7.83□□□□□ -1.16
LSM6-206ENST00000510331 MT1XP80297 61 aa7.83□□□□□ -1.16
LSM6-206ENST00000510331 SMIM20Q8N5G0 67 aa7.81□□□□□ -1.16
LSM6-206ENST00000510331 KRTAP5-9P26371 169 aa7.8□□□□□ -1.16
LSM6-206ENST00000510331 KMT2DO14686 5537 aa7.8□□□□□ -1.16
LSM6-206ENST00000510331 PLAC4Q8WY50 150 aa7.79□□□□□ -1.16
LSM6-206ENST00000510331 PRO2289Q9P1D8 64 aa7.78□□□□□ -1.16
LSM6-206ENST00000510331 ACYP2P14621 99 aa7.76□□□□□ -1.17
LSM6-206ENST00000510331 LINC01554Q52M75 96 aa7.73□□□□□ -1.17
LSM6-206ENST00000510331 MDN1Q9NU22 5596 aa7.73□□□□□ -1.17
LSM6-206ENST00000510331 SNURFQ9Y675 71 aa7.72□□□□□ -1.17
LSM6-206ENST00000510331 CHKB-CPT1BH3BT56 60 aa7.66□□□□□ -1.18
LSM6-206ENST00000510331 SPTSSBQ8NFR3 76 aa7.66□□□□□ -1.18
LSM6-206ENST00000510331 KRTAP12-2P59991 146 aa7.59□□□□□ -1.19
LSM6-206ENST00000510331 SPRR2FQ96RM1 72 aa7.59□□□□□ -1.19
LSM6-206ENST00000510331 SERP2Q8N6R1 65 aa7.57□□□□□ -1.2
LSM6-206ENST00000510331 SPANXA2-OT1Q8N9U9 137 aa7.57□□□□□ -1.2
LSM6-206ENST00000510331 KRTAP20-1Q3LI63 56 aa7.56□□□□□ -1.2
LSM6-206ENST00000510331 KRTAP8-1Q8IUC2 63 aa7.55□□□□□ -1.2
LSM6-206ENST00000510331 KRTAP4-8A0A0G2JLE6 195 aa7.48□□□□□ -1.21
LSM6-206ENST00000510331 SPRR2EP22531 72 aa7.48□□□□□ -1.21
LSM6-206ENST00000510331 SPRR2BP35325 72 aa7.48□□□□□ -1.21
LSM6-206ENST00000510331 SPRR2AP35326 72 aa7.48□□□□□ -1.21
LSM6-206ENST00000510331 KRTAP10-7P60409 375 aaPredicted RBP7.48□□□□□ -1.21
LSM6-206ENST00000510331 KRTAP4-8Q9BYQ9 185 aa7.48□□□□□ -1.21
LSM6-206ENST00000510331 KRTAP13-4Q3LI77 160 aa7.44□□□□□ -1.22
LSM6-206ENST00000510331 COA5Q86WW8 74 aa7.41□□□□□ -1.22
LSM6-206ENST00000510331 KRTAP10-12P60413 245 aa7.4□□□□□ -1.22
LSM6-206ENST00000510331 LCE1AQ5T7P2 110 aa7.37□□□□□ -1.23
LSM6-206ENST00000510331 COX7CP15954 63 aa7.33□□□□□ -1.24
LSM6-206ENST00000510331 LOC100996750A0A140TA64 210 aa7.32□□□□□ -1.24
LSM6-206ENST00000510331 KRTAP2-3P0C7H8 128 aa7.32□□□□□ -1.24
LSM6-206ENST00000510331 KRTAP4-6Q9BYQ5 205 aa7.32□□□□□ -1.24
LSM6-206ENST00000510331 KRTAP2-4Q9BYR9 128 aa7.32□□□□□ -1.24
LSM6-206ENST00000510331 CYSTM1Q9H1C7 97 aa7.31□□□□□ -1.24
LSM6-206ENST00000510331 H7BZZ5 65 aa7.25□□□□□ -1.25
LSM6-206ENST00000510331 CAMK2N1Q7Z7J9 78 aa7.24□□□□□ -1.25
LSM6-206ENST00000510331 SPRR2DP22532 72 aa7.23□□□□□ -1.25
LSM6-206ENST00000510331 SEC61GP60059 68 aa7.2□□□□□ -1.26
LSM6-206ENST00000510331 A0A0D9SG42 100 aa7.19□□□□□ -1.26
LSM6-206ENST00000510331 SERP1Q9Y6X1 66 aa7.19□□□□□ -1.26
LSM6-206ENST00000510331 SPATA8Q6RVD6 105 aa7.17□□□□□ -1.26
LSM6-206ENST00000510331 A0A1B0GU33 70 aa7.11□□□□□ -1.27
LSM6-206ENST00000510331 ANAPC13Q9BS18 74 aa7.09□□□□□ -1.27
LSM6-206ENST00000510331 KRTAP2-2Q9BYT5 123 aa7.09□□□□□ -1.27
LSM6-206ENST00000510331 KRTAP2-1Q9BYU5 128 aa7.09□□□□□ -1.27
LSM6-206ENST00000510331 SPINT4Q6UDR6 99 aa7.06□□□□□ -1.28
LSM6-206ENST00000510331 KRTAP12-1P59990 96 aa7.03□□□□□ -1.28
LSM6-206ENST00000510331 LCE3BQ5TA77 95 aa7.01□□□□□ -1.29
LSM6-206ENST00000510331 A0A1B0GU69 56 aa7□□□□□ -1.29
LSM6-206ENST00000510331 KRTAP19-7Q3SYF9 63 aa6.99□□□□□ -1.29
LSM6-206ENST00000510331 CCDC179H3BU77 68 aa6.98□□□□□ -1.29
LSM6-206ENST00000510331 MT1EP04732 61 aa6.94□□□□□ -1.3
LSM6-206ENST00000510331 A8MU10 97 aa6.92□□□□□ -1.3
LSM6-206ENST00000510331 SMIM26A0A096LP01 95 aa6.89□□□□□ -1.31
LSM6-206ENST00000510331 LCE5AQ5TCM9 118 aa6.87□□□□□ -1.31
LSM6-206ENST00000510331 KRTAP19-3Q7Z4W3 81 aa6.85□□□□□ -1.31
LSM6-206ENST00000510331 ATP5EP56381 51 aaPredicted RBP6.84□□□□□ -1.31
LSM6-206ENST00000510331 KRTAP19-5Q3LI72 72 aa6.82□□□□□ -1.32
LSM6-206ENST00000510331 DSTQ03001 7570 aaKnown RBP6.78□□□□□ -1.32
LSM6-206ENST00000510331 PRR15LQ9BU68 103 aa6.76□□□□□ -1.33
LSM6-206ENST00000510331 C10orf95Q9H7T3 257 aa6.73□□□□□ -1.33
LSM6-206ENST00000510331 LINC01558Q9Y6Z2 57 aa6.72□□□□□ -1.33
LSM6-206ENST00000510331 TMEM258P61165 79 aa6.68□□□□□ -1.34
LSM6-206ENST00000510331 LCE3AQ5TA76 89 aa6.68□□□□□ -1.34
LSM6-206ENST00000510331 TNP1P09430 55 aa6.65□□□□□ -1.34
LSM6-206ENST00000510331 MT1GP13640 62 aa6.65□□□□□ -1.34
LSM6-206ENST00000510331 MT1LQ93083 61 aa6.63□□□□□ -1.35
LSM6-206ENST00000510331 KRTAP4-12Q9BQ66 201 aa6.62□□□□□ -1.35
LSM6-206ENST00000510331 MT1MQ8N339 61 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms