RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 NEBP20929 6669 aa5.54□□□□□ -1.52
KDM3B-206ENST00000509468 A0A087WVE0 104 aa5.53□□□□□ -1.52
KDM3B-206ENST00000509468 NDUFC1O43677 76 aa5.53□□□□□ -1.52
KDM3B-206ENST00000509468 UQCRQO14949 82 aa5.52□□□□□ -1.53
KDM3B-206ENST00000509468 ATOX1O00244 68 aa5.51□□□□□ -1.53
KDM3B-206ENST00000509468 H0YAA0 97 aa5.5□□□□□ -1.53
KDM3B-206ENST00000509468 HIST1H4AP62805 103 aaKnown RBP5.49□□□□□ -1.53
KDM3B-206ENST00000509468 ATP5EP2Q5VTU8 51 aa5.49□□□□□ -1.53
KDM3B-206ENST00000509468 H0Y9P7 68 aa5.48□□□□□ -1.53
KDM3B-206ENST00000509468 KRTAP5-9P26371 169 aa5.47□□□□□ -1.53
KDM3B-206ENST00000509468 FAM240AA0A1B0GVK7 77 aa5.46□□□□□ -1.54
KDM3B-206ENST00000509468 A8MUN3 132 aa5.46□□□□□ -1.54
KDM3B-206ENST00000509468 PCP4L1A6NKN8 68 aa5.45□□□□□ -1.54
KDM3B-206ENST00000509468 KRTAP20-1Q3LI63 56 aa5.42□□□□□ -1.54
KDM3B-206ENST00000509468 ADM2Q7Z4H4 148 aa5.42□□□□□ -1.54
KDM3B-206ENST00000509468 MUC12Q9UKN1 5478 aa5.41□□□□□ -1.54
KDM3B-206ENST00000509468 PRO2289Q9P1D8 64 aa5.4□□□□□ -1.54
KDM3B-206ENST00000509468 LINC00208Q96KT6 92 aa5.39□□□□□ -1.55
KDM3B-206ENST00000509468 MP68P56378 58 aa5.37□□□□□ -1.55
KDM3B-206ENST00000509468 LINC00643Q86TS7 51 aa5.37□□□□□ -1.55
KDM3B-206ENST00000509468 PLAC4Q8WY50 150 aa5.37□□□□□ -1.55
KDM3B-206ENST00000509468 C20orf197Q8N268 126 aa5.32□□□□□ -1.56
KDM3B-206ENST00000509468 OCR1Q9BZK8 76 aa5.31□□□□□ -1.56
KDM3B-206ENST00000509468 R4GN34 69 aa5.31□□□□□ -1.56
KDM3B-206ENST00000509468 KRTAP2-3P0C7H8 128 aa5.29□□□□□ -1.56
KDM3B-206ENST00000509468 MT1XP80297 61 aa5.29□□□□□ -1.56
KDM3B-206ENST00000509468 KRTAP2-4Q9BYR9 128 aa5.29□□□□□ -1.56
KDM3B-206ENST00000509468 KMT2DO14686 5537 aa5.29□□□□□ -1.56
KDM3B-206ENST00000509468 SPRR2FQ96RM1 72 aa5.28□□□□□ -1.56
KDM3B-206ENST00000509468 H3BPC8 53 aa5.27□□□□□ -1.57
KDM3B-206ENST00000509468 M0QZ58 72 aa5.24□□□□□ -1.57
KDM3B-206ENST00000509468 P0C880 135 aa5.24□□□□□ -1.57
KDM3B-206ENST00000509468 KRTAP8-1Q8IUC2 63 aa5.24□□□□□ -1.57
KDM3B-206ENST00000509468 MDN1Q9NU22 5596 aa5.23□□□□□ -1.57
KDM3B-206ENST00000509468 SPRR2EP22531 72 aa5.23□□□□□ -1.57
KDM3B-206ENST00000509468 SPRR2BP35325 72 aa5.23□□□□□ -1.57
KDM3B-206ENST00000509468 SPRR2AP35326 72 aa5.23□□□□□ -1.57
KDM3B-206ENST00000509468 KRTAP12-2P59991 146 aa5.23□□□□□ -1.57
KDM3B-206ENST00000509468 DMAC1Q96GE9 116 aa5.22□□□□□ -1.57
KDM3B-206ENST00000509468 SCGB1A1P11684 91 aa5.21□□□□□ -1.58
KDM3B-206ENST00000509468 KRTAP3-2Q9BYR7 98 aa5.18□□□□□ -1.58
KDM3B-206ENST00000509468 J3QR89 54 aa5.17□□□□□ -1.58
KDM3B-206ENST00000509468 LINC01554Q52M75 96 aa5.17□□□□□ -1.58
KDM3B-206ENST00000509468 TRAV7A0A075B6U4 112 aa5.15□□□□□ -1.59
KDM3B-206ENST00000509468 LCE1AQ5T7P2 110 aa5.14□□□□□ -1.59
KDM3B-206ENST00000509468 ACYP2P14621 99 aa5.13□□□□□ -1.59
KDM3B-206ENST00000509468 A0A1B0GV90 55 aa5.12□□□□□ -1.59
KDM3B-206ENST00000509468 KRTAP4-8A0A0G2JLE6 195 aa5.11□□□□□ -1.59
KDM3B-206ENST00000509468 SPTSSBQ8NFR3 76 aa5.11□□□□□ -1.59
KDM3B-206ENST00000509468 KRTAP4-8Q9BYQ9 185 aa5.11□□□□□ -1.59
KDM3B-206ENST00000509468 KRTAP2-2Q9BYT5 123 aa5.1□□□□□ -1.59
KDM3B-206ENST00000509468 KRTAP2-1Q9BYU5 128 aa5.1□□□□□ -1.59
KDM3B-206ENST00000509468 MT-ATP8P03928 68 aa5.07□□□□□ -1.6
KDM3B-206ENST00000509468 SPRR2DP22532 72 aa5.06□□□□□ -1.6
KDM3B-206ENST00000509468 KRTAP10-12P60413 245 aa5.05□□□□□ -1.6
KDM3B-206ENST00000509468 KRTAP10-7P60409 375 aaPredicted RBP5.04□□□□□ -1.6
KDM3B-206ENST00000509468 SMIM20Q8N5G0 67 aa5.03□□□□□ -1.6
KDM3B-206ENST00000509468 CHKB-CPT1BH3BT56 60 aa5.01□□□□□ -1.61
KDM3B-206ENST00000509468 LCE3BQ5TA77 95 aa4.95□□□□□ -1.62
KDM3B-206ENST00000509468 K7ERU9 68 aa4.89□□□□□ -1.63
KDM3B-206ENST00000509468 SNURFQ9Y675 71 aa4.89□□□□□ -1.63
KDM3B-206ENST00000509468 SPANXA2-OT1Q8N9U9 137 aa4.88□□□□□ -1.63
KDM3B-206ENST00000509468 CAMK2N1Q7Z7J9 78 aa4.87□□□□□ -1.63
KDM3B-206ENST00000509468 KRTAP13-4Q3LI77 160 aa4.82□□□□□ -1.64
KDM3B-206ENST00000509468 SEC61GP60059 68 aa4.78□□□□□ -1.64
KDM3B-206ENST00000509468 SERP2Q8N6R1 65 aa4.78□□□□□ -1.64
KDM3B-206ENST00000509468 SERP1Q9Y6X1 66 aa4.76□□□□□ -1.65
KDM3B-206ENST00000509468 KRTAP19-7Q3SYF9 63 aa4.73□□□□□ -1.65
KDM3B-206ENST00000509468 LCE5AQ5TCM9 118 aa4.73□□□□□ -1.65
KDM3B-206ENST00000509468 COA5Q86WW8 74 aa4.72□□□□□ -1.65
KDM3B-206ENST00000509468 A0A0D9SG42 100 aa4.7□□□□□ -1.66
KDM3B-206ENST00000509468 MT1EP04732 61 aa4.7□□□□□ -1.66
KDM3B-206ENST00000509468 KRTAP19-3Q7Z4W3 81 aa4.7□□□□□ -1.66
KDM3B-206ENST00000509468 A0A1B0GU33 70 aa4.67□□□□□ -1.66
KDM3B-206ENST00000509468 SPATA8Q6RVD6 105 aa4.66□□□□□ -1.66
KDM3B-206ENST00000509468 SPINT4Q6UDR6 99 aa4.66□□□□□ -1.66
KDM3B-206ENST00000509468 DSTQ03001 7570 aaKnown RBP4.62□□□□□ -1.67
KDM3B-206ENST00000509468 MT1GP13640 62 aa4.62□□□□□ -1.67
KDM3B-206ENST00000509468 KRTAP4-9Q9BYQ8 210 aa4.61□□□□□ -1.67
KDM3B-206ENST00000509468 KRTAP12-1P59990 96 aa4.6□□□□□ -1.67
KDM3B-206ENST00000509468 CYSTM1Q9H1C7 97 aa4.6□□□□□ -1.67
KDM3B-206ENST00000509468 KRTAP19-5Q3LI72 72 aa4.59□□□□□ -1.67
KDM3B-206ENST00000509468 PP632Q6XCG6 107 aa4.59□□□□□ -1.67
KDM3B-206ENST00000509468 COX7CP15954 63 aa4.58□□□□□ -1.68
KDM3B-206ENST00000509468 SMIM26A0A096LP01 95 aa4.55□□□□□ -1.68
KDM3B-206ENST00000509468 H7BZZ5 65 aa4.53□□□□□ -1.68
KDM3B-206ENST00000509468 A0A1B0GU69 56 aa4.52□□□□□ -1.69
KDM3B-206ENST00000509468 GPR98Q8WXG9 6306 aa4.51□□□□□ -1.69
KDM3B-206ENST00000509468 LCE4AQ5TA78 99 aa4.49□□□□□ -1.69
KDM3B-206ENST00000509468 LCE1DQ5T752 114 aa4.48□□□□□ -1.69
KDM3B-206ENST00000509468 MT1MQ8N339 61 aa4.48□□□□□ -1.69
KDM3B-206ENST00000509468 TNP1P09430 55 aa4.46□□□□□ -1.7
KDM3B-206ENST00000509468 MT1LQ93083 61 aa4.46□□□□□ -1.7
KDM3B-206ENST00000509468 A8MU10 97 aa4.44□□□□□ -1.7
KDM3B-206ENST00000509468 MT4P47944 62 aa4.42□□□□□ -1.7
KDM3B-206ENST00000509468 LCE3AQ5TA76 89 aa4.42□□□□□ -1.7
KDM3B-206ENST00000509468 C10orf95Q9H7T3 257 aa4.42□□□□□ -1.7
KDM3B-206ENST00000509468 PRR15LQ9BU68 103 aa4.38□□□□□ -1.71
KDM3B-206ENST00000509468 SVIPQ8NHG7 77 aa4.37□□□□□ -1.71
KDM3B-206ENST00000509468 KRTAP5-4Q6L8H1 288 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 1002.5 ms