RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 PRO0461Q9UI25 63 aa6.93□□□□□ -1.3
TPM3-219ENST00000509409 MT1BP07438 61 aa6.91□□□□□ -1.3
TPM3-219ENST00000509409 COL5A1-AS1Q5SY13 56 aa6.91□□□□□ -1.3
TPM3-219ENST00000509409 K7EP34 96 aa6.9□□□□□ -1.3
TPM3-219ENST00000509409 SPRR2GQ9BYE4 73 aa6.89□□□□□ -1.31
TPM3-219ENST00000509409 KRTAP19-8Q3LI54 63 aa6.88□□□□□ -1.31
TPM3-219ENST00000509409 KLKP1Q107X0 134 aa6.87□□□□□ -1.31
TPM3-219ENST00000509409 PCP4L1A6NKN8 68 aa6.86□□□□□ -1.31
TPM3-219ENST00000509409 CYP4F30PQ9H0H9 118 aa6.82□□□□□ -1.32
TPM3-219ENST00000509409 NEBP20929 6669 aa6.81□□□□□ -1.32
TPM3-219ENST00000509409 KRTAP10-5P60370 271 aa6.81□□□□□ -1.32
TPM3-219ENST00000509409 GTF2H5Q6ZYL4 71 aa6.81□□□□□ -1.32
TPM3-219ENST00000509409 MUC12Q9UKN1 5478 aa6.8□□□□□ -1.32
TPM3-219ENST00000509409 F8W1H4 67 aa6.78□□□□□ -1.32
TPM3-219ENST00000509409 ETDBQ3ZM63 59 aa6.78□□□□□ -1.32
TPM3-219ENST00000509409 IMUPQ9GZP8 106 aa6.78□□□□□ -1.32
TPM3-219ENST00000509409 A0A087WVE0 104 aa6.76□□□□□ -1.33
TPM3-219ENST00000509409 TRAV22A0A0B4J277 110 aa6.76□□□□□ -1.33
TPM3-219ENST00000509409 CRIPTQ9P021 101 aa6.76□□□□□ -1.33
TPM3-219ENST00000509409 LOC101927531A0A1B0GV80 90 aa6.75□□□□□ -1.33
TPM3-219ENST00000509409 NDUFC1O43677 76 aa6.7□□□□□ -1.34
TPM3-219ENST00000509409 KRTAP5-3Q6L8H2 238 aa6.69□□□□□ -1.34
TPM3-219ENST00000509409 UQCRQO14949 82 aa6.66□□□□□ -1.34
TPM3-219ENST00000509409 HIST1H4AP62805 103 aaKnown RBP6.66□□□□□ -1.34
TPM3-219ENST00000509409 H0Y9P7 68 aa6.65□□□□□ -1.34
TPM3-219ENST00000509409 ACYP1P07311 99 aa6.65□□□□□ -1.34
TPM3-219ENST00000509409 KRTAP20-1Q3LI63 56 aa6.65□□□□□ -1.34
TPM3-219ENST00000509409 ATOX1O00244 68 aa6.64□□□□□ -1.35
TPM3-219ENST00000509409 KRTAP5-9P26371 169 aa6.63□□□□□ -1.35
TPM3-219ENST00000509409 H0YAA0 97 aa6.62□□□□□ -1.35
TPM3-219ENST00000509409 MDN1Q9NU22 5596 aa6.61□□□□□ -1.35
TPM3-219ENST00000509409 ATP5EP2Q5VTU8 51 aa6.61□□□□□ -1.35
TPM3-219ENST00000509409 KMT2DO14686 5537 aa6.6□□□□□ -1.35
TPM3-219ENST00000509409 ADM2Q7Z4H4 148 aa6.6□□□□□ -1.35
TPM3-219ENST00000509409 A8MUN3 132 aa6.57□□□□□ -1.36
TPM3-219ENST00000509409 FAM240AA0A1B0GVK7 77 aa6.55□□□□□ -1.36
TPM3-219ENST00000509409 H3BS24 57 aa6.54□□□□□ -1.36
TPM3-219ENST00000509409 LINC00208Q96KT6 92 aa6.54□□□□□ -1.36
TPM3-219ENST00000509409 PRO2289Q9P1D8 64 aa6.53□□□□□ -1.36
TPM3-219ENST00000509409 PLAC4Q8WY50 150 aa6.52□□□□□ -1.37
TPM3-219ENST00000509409 A0A1B0GV90 55 aa6.48□□□□□ -1.37
TPM3-219ENST00000509409 MP68P56378 58 aa6.48□□□□□ -1.37
TPM3-219ENST00000509409 LINC00643Q86TS7 51 aa6.47□□□□□ -1.37
TPM3-219ENST00000509409 SPRR2FQ96RM1 72 aa6.47□□□□□ -1.37
TPM3-219ENST00000509409 R4GN34 69 aa6.46□□□□□ -1.38
TPM3-219ENST00000509409 MT1XP80297 61 aa6.45□□□□□ -1.38
TPM3-219ENST00000509409 KRTAP2-3P0C7H8 128 aa6.43□□□□□ -1.38
TPM3-219ENST00000509409 KRTAP2-4Q9BYR9 128 aa6.43□□□□□ -1.38
TPM3-219ENST00000509409 SPRR2EP22531 72 aa6.42□□□□□ -1.38
TPM3-219ENST00000509409 SPRR2BP35325 72 aa6.42□□□□□ -1.38
TPM3-219ENST00000509409 SPRR2AP35326 72 aa6.42□□□□□ -1.38
TPM3-219ENST00000509409 C20orf197Q8N268 126 aa6.41□□□□□ -1.38
TPM3-219ENST00000509409 P0C880 135 aa6.4□□□□□ -1.38
TPM3-219ENST00000509409 OCR1Q9BZK8 76 aa6.4□□□□□ -1.38
TPM3-219ENST00000509409 M0QZ58 72 aa6.39□□□□□ -1.39
TPM3-219ENST00000509409 KRTAP8-1Q8IUC2 63 aa6.39□□□□□ -1.39
TPM3-219ENST00000509409 LINC01554Q52M75 96 aa6.34□□□□□ -1.39
TPM3-219ENST00000509409 H3BPC8 53 aa6.33□□□□□ -1.4
TPM3-219ENST00000509409 KRTAP12-2P59991 146 aa6.32□□□□□ -1.4
TPM3-219ENST00000509409 DMAC1Q96GE9 116 aa6.31□□□□□ -1.4
TPM3-219ENST00000509409 SCGB1A1P11684 91 aa6.3□□□□□ -1.4
TPM3-219ENST00000509409 LCE1AQ5T7P2 110 aa6.26□□□□□ -1.41
TPM3-219ENST00000509409 KRTAP2-2Q9BYT5 123 aa6.22□□□□□ -1.41
TPM3-219ENST00000509409 KRTAP2-1Q9BYU5 128 aa6.22□□□□□ -1.41
TPM3-219ENST00000509409 SPRR2DP22532 72 aa6.21□□□□□ -1.42
TPM3-219ENST00000509409 J3QR89 54 aa6.2□□□□□ -1.42
TPM3-219ENST00000509409 TRAV7A0A075B6U4 112 aa6.19□□□□□ -1.42
TPM3-219ENST00000509409 MT-ATP8P03928 68 aa6.19□□□□□ -1.42
TPM3-219ENST00000509409 ACYP2P14621 99 aa6.19□□□□□ -1.42
TPM3-219ENST00000509409 KRTAP10-7P60409 375 aaPredicted RBP6.17□□□□□ -1.42
TPM3-219ENST00000509409 SPTSSBQ8NFR3 76 aa6.16□□□□□ -1.42
TPM3-219ENST00000509409 KRTAP10-12P60413 245 aa6.12□□□□□ -1.43
TPM3-219ENST00000509409 CHKB-CPT1BH3BT56 60 aa6.1□□□□□ -1.43
TPM3-219ENST00000509409 SMIM20Q8N5G0 67 aa6.03□□□□□ -1.44
TPM3-219ENST00000509409 K7ERU9 68 aa5.99□□□□□ -1.45
TPM3-219ENST00000509409 SNURFQ9Y675 71 aa5.95□□□□□ -1.46
TPM3-219ENST00000509409 CAMK2N1Q7Z7J9 78 aa5.93□□□□□ -1.46
TPM3-219ENST00000509409 KRTAP13-4Q3LI77 160 aa5.89□□□□□ -1.47
TPM3-219ENST00000509409 SPANXA2-OT1Q8N9U9 137 aa5.85□□□□□ -1.47
TPM3-219ENST00000509409 A0A0D9SG42 100 aa5.77□□□□□ -1.49
TPM3-219ENST00000509409 SEC61GP60059 68 aa5.77□□□□□ -1.49
TPM3-219ENST00000509409 SERP1Q9Y6X1 66 aa5.76□□□□□ -1.49
TPM3-219ENST00000509409 KRTAP19-7Q3SYF9 63 aa5.75□□□□□ -1.49
TPM3-219ENST00000509409 SERP2Q8N6R1 65 aa5.75□□□□□ -1.49
TPM3-219ENST00000509409 MT1EP04732 61 aa5.73□□□□□ -1.49
TPM3-219ENST00000509409 COA5Q86WW8 74 aa5.73□□□□□ -1.49
TPM3-219ENST00000509409 KRTAP19-3Q7Z4W3 81 aa5.72□□□□□ -1.49
TPM3-219ENST00000509409 DSTQ03001 7570 aaKnown RBP5.71□□□□□ -1.49
TPM3-219ENST00000509409 SPINT4Q6UDR6 99 aa5.71□□□□□ -1.5
TPM3-219ENST00000509409 SPATA8Q6RVD6 105 aa5.69□□□□□ -1.5
TPM3-219ENST00000509409 GPR98Q8WXG9 6306 aa5.66□□□□□ -1.5
TPM3-219ENST00000509409 A0A1B0GU33 70 aa5.65□□□□□ -1.5
TPM3-219ENST00000509409 CYSTM1Q9H1C7 97 aa5.62□□□□□ -1.51
TPM3-219ENST00000509409 KRTAP19-5Q3LI72 72 aa5.61□□□□□ -1.51
TPM3-219ENST00000509409 MT1GP13640 62 aa5.58□□□□□ -1.52
TPM3-219ENST00000509409 KRTAP12-1P59990 96 aa5.57□□□□□ -1.52
TPM3-219ENST00000509409 PP632Q6XCG6 107 aa5.56□□□□□ -1.52
TPM3-219ENST00000509409 COX7CP15954 63 aa5.54□□□□□ -1.52
TPM3-219ENST00000509409 SMIM26A0A096LP01 95 aa5.5□□□□□ -1.53
TPM3-219ENST00000509409 A0A1B0GU69 56 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 232.8 ms