RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 DEFB1P60022 68 aa0.52□□□□□ -2.33
GYPA-205ENST00000508337 ANK3Q12955 4377 aaKnown RBP0.52□□□□□ -2.33
GYPA-205ENST00000508337 HSPG2P98160 4391 aa0.52□□□□□ -2.33
GYPA-205ENST00000508337 DNAH2Q9P225 4427 aa0.52□□□□□ -2.33
GYPA-205ENST00000508337 ITPR3Q14573 2671 aa0.51□□□□□ -2.33
GYPA-205ENST00000508337 FRYQ5TBA9 3013 aa0.51□□□□□ -2.33
GYPA-205ENST00000508337 HIVEP1P15822 2718 aa0.51□□□□□ -2.33
GYPA-205ENST00000508337 DYNC2H1Q8NCM8 4307 aaKnown RBP0.5□□□□□ -2.33
GYPA-205ENST00000508337 PHGR1C9JFL3 82 aa0.5□□□□□ -2.33
GYPA-205ENST00000508337 RANBP2P49792 3224 aaKnown RBP0.5□□□□□ -2.33
GYPA-205ENST00000508337 USP9XQ93008 2570 aaPredicted RBP0.49□□□□□ -2.33
GYPA-205ENST00000508337 CELSR3Q9NYQ7 3312 aa0.48□□□□□ -2.33
GYPA-205ENST00000508337 ZANQ9Y493 2812 aa0.48□□□□□ -2.33
GYPA-205ENST00000508337 KRTAP19-5Q3LI72 72 aa0.48□□□□□ -2.33
GYPA-205ENST00000508337 MGAM2Q2M2H8 2515 aa0.47□□□□□ -2.33
GYPA-205ENST00000508337 SPRR2EP22531 72 aa0.47□□□□□ -2.33
GYPA-205ENST00000508337 SPRR2FQ96RM1 72 aa0.47□□□□□ -2.33
GYPA-205ENST00000508337 FLNAP21333 2647 aaKnown RBP0.46□□□□□ -2.34
GYPA-205ENST00000508337 WDR87Q6ZQQ6 2873 aa0.46□□□□□ -2.34
GYPA-205ENST00000508337 APOBP04114 4563 aaKnown RBP0.46□□□□□ -2.34
GYPA-205ENST00000508337 TLN2Q9Y4G6 2542 aa0.46□□□□□ -2.34
GYPA-205ENST00000508337 MUC5ACP98088 5654 aa0.46□□□□□ -2.34
GYPA-205ENST00000508337 DNAH3Q8TD57 4116 aa0.46□□□□□ -2.34
GYPA-205ENST00000508337 FAT4Q6V0I7 4981 aa0.46□□□□□ -2.34
GYPA-205ENST00000508337 DNAH8Q96JB1 4490 aa0.46□□□□□ -2.34
GYPA-205ENST00000508337 PKHD1L1Q86WI1 4243 aa0.46□□□□□ -2.34
GYPA-205ENST00000508337 LRP1BQ9NZR2 4599 aa0.45□□□□□ -2.34
GYPA-205ENST00000508337 FLGP20930 4061 aaPredicted RBP0.44□□□□□ -2.34
GYPA-205ENST00000508337 LAMA1P25391 3075 aa0.44□□□□□ -2.34
GYPA-205ENST00000508337 TRIOO75962 3097 aa0.44□□□□□ -2.34
GYPA-205ENST00000508337 HECTD4Q9Y4D8 3996 aa0.44□□□□□ -2.34
GYPA-205ENST00000508337 CEP250Q9BV73 2442 aa0.44□□□□□ -2.34
GYPA-205ENST00000508337 KMT2DO14686 5537 aa0.44□□□□□ -2.34
GYPA-205ENST00000508337 SVEP1Q4LDE5 3571 aa0.44□□□□□ -2.34
GYPA-205ENST00000508337 ZFHX4Q86UP3 3567 aa0.43□□□□□ -2.34
GYPA-205ENST00000508337 SPENQ96T58 3664 aaKnown RBP0.43□□□□□ -2.34
GYPA-205ENST00000508337 COL6A3P12111 3177 aa0.43□□□□□ -2.34
GYPA-205ENST00000508337 HMCN2Q8NDA2 5059 aa0.42□□□□□ -2.34
GYPA-205ENST00000508337 MXRA5Q9NR99 2828 aa0.42□□□□□ -2.34
GYPA-205ENST00000508337 TGP01266 2768 aa0.42□□□□□ -2.34
GYPA-205ENST00000508337 DEFB133Q30KQ1 61 aa0.41□□□□□ -2.34
GYPA-205ENST00000508337 DEFB124Q8NES8 71 aa0.41□□□□□ -2.34
GYPA-205ENST00000508337 MGAQ8IWI9 3026 aa0.4□□□□□ -2.34
GYPA-205ENST00000508337 LAMA5O15230 3695 aa0.39□□□□□ -2.35
GYPA-205ENST00000508337 ITPR1Q14643 2758 aa0.39□□□□□ -2.35
GYPA-205ENST00000508337 NBEAL1Q6ZS30 2694 aa0.39□□□□□ -2.35
GYPA-205ENST00000508337 ADGRG4Q8IZF6 3080 aa0.39□□□□□ -2.35
GYPA-205ENST00000508337 PKHD1P08F94 4074 aa0.38□□□□□ -2.35
GYPA-205ENST00000508337 HTTP42858 3142 aa0.38□□□□□ -2.35
GYPA-205ENST00000508337 MAP1AP78559 2803 aaPredicted RBP0.38□□□□□ -2.35
GYPA-205ENST00000508337 SPTBN5Q9NRC6 3674 aaKnown RBP0.38□□□□□ -2.35
GYPA-205ENST00000508337 FAT3Q8TDW7 4589 aa0.38□□□□□ -2.35
GYPA-205ENST00000508337 DNAH6Q9C0G6 4158 aa0.38□□□□□ -2.35
GYPA-205ENST00000508337 DOPEY1Q5JWR5 2465 aa0.37□□□□□ -2.35
GYPA-205ENST00000508337 FAT1Q14517 4588 aa0.37□□□□□ -2.35
GYPA-205ENST00000508337 CFAP54Q96N23 3096 aa0.36□□□□□ -2.35
GYPA-205ENST00000508337 SYNE2Q8WXH0 6885 aaKnown RBP0.36□□□□□ -2.35
GYPA-205ENST00000508337 SPTAN1Q13813 2472 aaKnown RBP0.36□□□□□ -2.35
GYPA-205ENST00000508337 AKAP9Q99996 3911 aa0.35□□□□□ -2.35
GYPA-205ENST00000508337 NBPF19A0A087WUL8 3843 aa0.34□□□□□ -2.35
GYPA-205ENST00000508337 A0A096LPF7 62 aa0.34□□□□□ -2.36
GYPA-205ENST00000508337 DNAH7Q8WXX0 4024 aa0.34□□□□□ -2.36
GYPA-205ENST00000508337 DMXL2Q8TDJ6 3036 aa0.33□□□□□ -2.36
GYPA-205ENST00000508337 LRP2P98164 4655 aa0.33□□□□□ -2.36
GYPA-205ENST00000508337 STAB2Q8WWQ8 2551 aa0.33□□□□□ -2.36
GYPA-205ENST00000508337 DNAH1Q9P2D7 4330 aa0.33□□□□□ -2.36
GYPA-205ENST00000508337 TEX15Q9BXT5 2789 aa0.33□□□□□ -2.36
GYPA-205ENST00000508337 DNAH10Q8IVF4 4471 aa0.32□□□□□ -2.36
GYPA-205ENST00000508337 HERC1Q15751 4861 aa0.32□□□□□ -2.36
GYPA-205ENST00000508337 CSMD1Q96PZ7 3565 aa0.32□□□□□ -2.36
GYPA-205ENST00000508337 MDN1Q9NU22 5596 aa0.32□□□□□ -2.36
GYPA-205ENST00000508337 STATHP02808 62 aa0.31□□□□□ -2.36
GYPA-205ENST00000508337 MACF1Q9UPN3 7388 aaKnown RBP0.31□□□□□ -2.36
GYPA-205ENST00000508337 FSIP2Q5CZC0 6907 aa0.31□□□□□ -2.36
GYPA-205ENST00000508337 DEFB4AO15263 64 aa0.29□□□□□ -2.36
GYPA-205ENST00000508337 PLECQ15149 4684 aaKnown RBP0.29□□□□□ -2.36
GYPA-205ENST00000508337 MT1HP80294 61 aa0.28□□□□□ -2.36
GYPA-205ENST00000508337 DEFB108BQ8NET1 73 aa0.28□□□□□ -2.36
GYPA-205ENST00000508337 LAMA3Q16787 3333 aa0.28□□□□□ -2.37
GYPA-205ENST00000508337 MT1EP04732 61 aa0.27□□□□□ -2.37
GYPA-205ENST00000508337 CD52P31358 61 aa0.27□□□□□ -2.37
GYPA-205ENST00000508337 SPRR2GQ9BYE4 73 aa0.27□□□□□ -2.37
GYPA-205ENST00000508337 CFAP46Q8IYW2 2715 aa0.26□□□□□ -2.37
GYPA-205ENST00000508337 ATMQ13315 3056 aa0.26□□□□□ -2.37
GYPA-205ENST00000508337 RELNP78509 3460 aa0.26□□□□□ -2.37
GYPA-205ENST00000508337 NIPBLQ6KC79 2804 aaeCLIP0.25□□□□□ -2.37
GYPA-205ENST00000508337 C5orf42Q9H799 3197 aa0.25□□□□□ -2.37
GYPA-205ENST00000508337 LRBAP50851 2863 aa0.24□□□□□ -2.37
GYPA-205ENST00000508337 RPS29P62273 56 aaKnown RBP0.24□□□□□ -2.37
GYPA-205ENST00000508337 LINC01556Q5JQF7 62 aa0.24□□□□□ -2.37
GYPA-205ENST00000508337 ITPR2Q14571 2701 aa0.24□□□□□ -2.37
GYPA-205ENST00000508337 DNAH17Q9UFH2 4485 aa0.24□□□□□ -2.37
GYPA-205ENST00000508337 CMYA5Q8N3K9 4069 aa0.23□□□□□ -2.37
GYPA-205ENST00000508337 DNAH12Q6ZR08 3092 aa0.23□□□□□ -2.37
GYPA-205ENST00000508337 MT1LQ93083 61 aa0.23□□□□□ -2.37
GYPA-205ENST00000508337 DSTQ03001 7570 aaKnown RBP0.22□□□□□ -2.37
GYPA-205ENST00000508337 PCLOQ9Y6V0 5065 aa0.22□□□□□ -2.37
GYPA-205ENST00000508337 DYNC1H1Q14204 4646 aaKnown RBP0.21□□□□□ -2.38
GYPA-205ENST00000508337 NEBP20929 6669 aa0.2□□□□□ -2.38
GYPA-205ENST00000508337 PRUNE2Q8WUY3 3088 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms