RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 KRTAP10-8P60410 259 aa11.71□□□□□ -0.54
SPCS3-203ENST00000507678 MYCBP2O75592 4640 aa11.68□□□□□ -0.54
SPCS3-203ENST00000507678 KIAA1109Q2LD37 5005 aa11.64□□□□□ -0.55
SPCS3-203ENST00000507678 RYR1P21817 5038 aa11.63□□□□□ -0.55
SPCS3-203ENST00000507678 KRTAP25-1Q3LHN0 102 aa11.52□□□□□ -0.57
SPCS3-203ENST00000507678 COX6B2Q6YFQ2 88 aa11.52□□□□□ -0.57
SPCS3-203ENST00000507678 ROMO1P60602 79 aa11.51□□□□□ -0.57
SPCS3-203ENST00000507678 XP32Q5T750 250 aa11.5□□□□□ -0.57
SPCS3-203ENST00000507678 RPL37P61927 97 aaKnown RBP11.48□□□□□ -0.57
SPCS3-203ENST00000507678 H0YAA0 97 aa11.47□□□□□ -0.57
SPCS3-203ENST00000507678 MT1HL1P0DM35 61 aa11.43□□□□□ -0.58
SPCS3-203ENST00000507678 EPPK1P58107 5090 aaKnown RBP11.43□□□□□ -0.58
SPCS3-203ENST00000507678 CRIPTQ9P021 101 aa11.4□□□□□ -0.59
SPCS3-203ENST00000507678 A0A1B0GU33 70 aa11.35□□□□□ -0.59
SPCS3-203ENST00000507678 LPAP08519 4548 aa11.3□□□□□ -0.6
SPCS3-203ENST00000507678 H1FX-AS1Q4G0G2 97 aa11.28□□□□□ -0.6
SPCS3-203ENST00000507678 P0C880 135 aa11.25□□□□□ -0.61
SPCS3-203ENST00000507678 LRP2P98164 4655 aa11.23□□□□□ -0.61
SPCS3-203ENST00000507678 KRTAP4-5Q9BYR2 181 aa11.22□□□□□ -0.61
SPCS3-203ENST00000507678 KRTAP3-3Q9BYR6 98 aa11.22□□□□□ -0.61
SPCS3-203ENST00000507678 S4R3F8 94 aa11.19□□□□□ -0.62
SPCS3-203ENST00000507678 ABCA13Q86UQ4 5058 aa11.17□□□□□ -0.62
SPCS3-203ENST00000507678 TPRXLQ17RH7 258 aa11.07□□□□□ -0.64
SPCS3-203ENST00000507678 KRTAP10-6P60371 365 aaPredicted RBP11.05□□□□□ -0.64
SPCS3-203ENST00000507678 K7ERS5 55 aa11.03□□□□□ -0.64
SPCS3-203ENST00000507678 A0A0D9SG42 100 aa11.01□□□□□ -0.65
SPCS3-203ENST00000507678 KRTAP13-4Q3LI77 160 aa10.99□□□□□ -0.65
SPCS3-203ENST00000507678 KRTAP3-2Q9BYR7 98 aa10.99□□□□□ -0.65
SPCS3-203ENST00000507678 SPINT4Q6UDR6 99 aa10.95□□□□□ -0.66
SPCS3-203ENST00000507678 J3QL48 77 aa10.85□□□□□ -0.67
SPCS3-203ENST00000507678 NDUFAF8A1L188 74 aa10.81□□□□□ -0.68
SPCS3-203ENST00000507678 C10orf95Q9H7T3 257 aa10.8□□□□□ -0.68
SPCS3-203ENST00000507678 HERC2O95714 4834 aa10.75□□□□□ -0.69
SPCS3-203ENST00000507678 SEC61BP60468 96 aaKnown RBP10.7□□□□□ -0.7
SPCS3-203ENST00000507678 KRTAP15-1Q3LI76 137 aa10.68□□□□□ -0.7
SPCS3-203ENST00000507678 KRTAP4-1Q9BYQ7 146 aa10.65□□□□□ -0.7
SPCS3-203ENST00000507678 MUC17Q685J3 4493 aa10.62□□□□□ -0.71
SPCS3-203ENST00000507678 KRTAP12-2P59991 146 aa10.61□□□□□ -0.71
SPCS3-203ENST00000507678 MUC2Q02817 5179 aa10.54□□□□□ -0.72
SPCS3-203ENST00000507678 KRTAP12-1P59990 96 aa10.5□□□□□ -0.73
SPCS3-203ENST00000507678 M0QZ58 72 aa10.47□□□□□ -0.73
SPCS3-203ENST00000507678 R4GN34 69 aa10.42□□□□□ -0.74
SPCS3-203ENST00000507678 BIRC6Q9NR09 4857 aa10.41□□□□□ -0.74
SPCS3-203ENST00000507678 LORP23490 312 aaPredicted RBP10.38□□□□□ -0.75
SPCS3-203ENST00000507678 HERC1Q15751 4861 aa10.34□□□□□ -0.75
SPCS3-203ENST00000507678 KRTAP19-2Q3LHN2 52 aa10.29□□□□□ -0.76
SPCS3-203ENST00000507678 PCLOQ9Y6V0 5065 aa10.28□□□□□ -0.76
SPCS3-203ENST00000507678 A0A0A0MQY5 61 aa10.26□□□□□ -0.77
SPCS3-203ENST00000507678 HMCN2Q8NDA2 5059 aa10.09□□□□□ -0.79
SPCS3-203ENST00000507678 FLGP20930 4061 aaPredicted RBP10.06□□□□□ -0.8
SPCS3-203ENST00000507678 FAT4Q6V0I7 4981 aa10.01□□□□□ -0.81
SPCS3-203ENST00000507678 LUZP6Q538Z0 58 aa9.99□□□□□ -0.81
SPCS3-203ENST00000507678 CAMK2N1Q7Z7J9 78 aa9.9□□□□□ -0.82
SPCS3-203ENST00000507678 PLAC4Q8WY50 150 aa9.89□□□□□ -0.83
SPCS3-203ENST00000507678 RNF213Q63HN8 5207 aa9.87□□□□□ -0.83
SPCS3-203ENST00000507678 UBR4Q5T4S7 5183 aa9.81□□□□□ -0.84
SPCS3-203ENST00000507678 LCE2CQ5TA81 110 aa9.8□□□□□ -0.84
SPCS3-203ENST00000507678 M0R2T5 61 aa9.78□□□□□ -0.84
SPCS3-203ENST00000507678 MT1HP80294 61 aa9.59□□□□□ -0.87
SPCS3-203ENST00000507678 KRTAP19-1Q8IUB9 90 aa9.47□□□□□ -0.89
SPCS3-203ENST00000507678 KRTAP10-10P60014 251 aa9.46□□□□□ -0.89
SPCS3-203ENST00000507678 SPRR2GQ9BYE4 73 aa9.43□□□□□ -0.9
SPCS3-203ENST00000507678 MT1FP04733 61 aa9.41□□□□□ -0.9
SPCS3-203ENST00000507678 TNP1P09430 55 aa9.4□□□□□ -0.9
SPCS3-203ENST00000507678 MT2AP02795 61 aa9.39□□□□□ -0.91
SPCS3-203ENST00000507678 PP632Q6XCG6 107 aa9.36□□□□□ -0.91
SPCS3-203ENST00000507678 KRTAP9-8Q9BYQ0 159 aa9.32□□□□□ -0.92
SPCS3-203ENST00000507678 KRTAP19-8Q3LI54 63 aa9.01□□□□□ -0.97
SPCS3-203ENST00000507678 MT1BP07438 61 aa9□□□□□ -0.97
SPCS3-203ENST00000507678 KRTAP23-1A1A580 65 aa8.99□□□□□ -0.97
SPCS3-203ENST00000507678 LCE3AQ5TA76 89 aa8.99□□□□□ -0.97
SPCS3-203ENST00000507678 SPRR5A0A1B0GTR4 108 aa8.98□□□□□ -0.97
SPCS3-203ENST00000507678 KRTAP9-3Q9BYQ3 159 aa8.92□□□□□ -0.98
SPCS3-203ENST00000507678 KRTAP10-5P60370 271 aa8.9□□□□□ -0.98
SPCS3-203ENST00000507678 MT1XP80297 61 aa8.9□□□□□ -0.98
SPCS3-203ENST00000507678 USH2AO75445 5202 aa8.75□□□□□ -1.01
SPCS3-203ENST00000507678 PRO2289Q9P1D8 64 aa8.73□□□□□ -1.01
SPCS3-203ENST00000507678 KRTAP10-7P60409 375 aaPredicted RBP8.71□□□□□ -1.02
SPCS3-203ENST00000507678 KRTAP10-12P60413 245 aa8.69□□□□□ -1.02
SPCS3-203ENST00000507678 LCE2BO14633 110 aa8.67□□□□□ -1.02
SPCS3-203ENST00000507678 KRTAP8-1Q8IUC2 63 aa8.62□□□□□ -1.03
SPCS3-203ENST00000507678 LCE2AQ5TA79 106 aaPredicted RBP8.57□□□□□ -1.04
SPCS3-203ENST00000507678 KRTAP12-3P60328 96 aa8.54□□□□□ -1.04
SPCS3-203ENST00000507678 KMT2DO14686 5537 aa8.49□□□□□ -1.05
SPCS3-203ENST00000507678 INE1O15225 51 aa8.44□□□□□ -1.06
SPCS3-203ENST00000507678 KRTAP19-5Q3LI72 72 aa8.29□□□□□ -1.08
SPCS3-203ENST00000507678 KRTAP4-8A0A0G2JLE6 195 aa8.28□□□□□ -1.08
SPCS3-203ENST00000507678 KRTAP4-8Q9BYQ9 185 aa8.28□□□□□ -1.08
SPCS3-203ENST00000507678 FSIP2Q5CZC0 6907 aa8.14□□□□□ -1.11
SPCS3-203ENST00000507678 SSPOA2VEC9 5147 aa8□□□□□ -1.13
SPCS3-203ENST00000507678 LCE3CQ5T5A8 94 aa7.99□□□□□ -1.13
SPCS3-203ENST00000507678 KRTAP19-7Q3SYF9 63 aa7.92□□□□□ -1.14
SPCS3-203ENST00000507678 KRTAP4-7Q9BYR0 210 aa7.85□□□□□ -1.15
SPCS3-203ENST00000507678 KRTAP9-6A8MVA2 160 aa7.74□□□□□ -1.17
SPCS3-203ENST00000507678 KRTAP19-6Q3LI70 58 aa7.73□□□□□ -1.17
SPCS3-203ENST00000507678 MT1EP04732 61 aa7.71□□□□□ -1.18
SPCS3-203ENST00000507678 MT1LQ93083 61 aa7.67□□□□□ -1.18
SPCS3-203ENST00000507678 FCGBPQ9Y6R7 5405 aaPredicted RBP7.6□□□□□ -1.19
SPCS3-203ENST00000507678 MUC12Q9UKN1 5478 aa7.53□□□□□ -1.2
SPCS3-203ENST00000507678 KRTAP4-3Q9BYR4 195 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms