RNA–Protein interactions for RNA: ENST00000506885.5

CLDND1-212, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-212ENST00000506885 WNK2Q9Y3S1 2297 aa1.77□□□□□ -2.13
CLDND1-212ENST00000506885 I3L2K1 104 aa1.77□□□□□ -2.13
CLDND1-212ENST00000506885 RPL39P5Q59GN2 51 aa1.76□□□□□ -2.13
CLDND1-212ENST00000506885 CSMD3Q7Z407 3707 aa1.76□□□□□ -2.13
CLDND1-212ENST00000506885 SACSQ9NZJ4 4579 aa1.76□□□□□ -2.13
CLDND1-212ENST00000506885 LINC00959A0A1B0GUT2 108 aa1.75□□□□□ -2.13
CLDND1-212ENST00000506885 K7EIM0 57 aa1.75□□□□□ -2.13
CLDND1-212ENST00000506885 RPL39P62891 51 aaKnown RBP1.75□□□□□ -2.13
CLDND1-212ENST00000506885 RPL39LQ96EH5 51 aaKnown RBP1.75□□□□□ -2.13
CLDND1-212ENST00000506885 GAFA1Q96PS6 74 aa1.75□□□□□ -2.13
CLDND1-212ENST00000506885 KCNQ1DNQ9H478 68 aa1.75□□□□□ -2.13
CLDND1-212ENST00000506885 DNAH9Q9NYC9 4486 aa1.74□□□□□ -2.13
CLDND1-212ENST00000506885 H3BUX3 64 aa1.74□□□□□ -2.13
CLDND1-212ENST00000506885 KIAA1109Q2LD37 5005 aa1.74□□□□□ -2.13
CLDND1-212ENST00000506885 FRAS1Q86XX4 4008 aa1.73□□□□□ -2.13
CLDND1-212ENST00000506885 M0QY20 66 aa1.73□□□□□ -2.13
CLDND1-212ENST00000506885 DMBT1Q9UGM3 2413 aaPredicted RBP1.73□□□□□ -2.13
CLDND1-212ENST00000506885 ABCA13Q86UQ4 5058 aa1.73□□□□□ -2.13
CLDND1-212ENST00000506885 ALMS1Q8TCU4 4167 aa1.73□□□□□ -2.13
CLDND1-212ENST00000506885 CDKN2A-AS1Q9UH64 79 aa1.71□□□□□ -2.14
CLDND1-212ENST00000506885 ETDCA0A1B0GVM5 59 aa1.7□□□□□ -2.14
CLDND1-212ENST00000506885 STARD9Q9P2P6 4700 aa1.7□□□□□ -2.14
CLDND1-212ENST00000506885 HERC1Q15751 4861 aa1.7□□□□□ -2.14
CLDND1-212ENST00000506885 COX7BP24311 80 aa1.69□□□□□ -2.14
CLDND1-212ENST00000506885 PRB3Q04118 309 aaPredicted RBP1.69□□□□□ -2.14
CLDND1-212ENST00000506885 A8MTW9 85 aa1.68□□□□□ -2.14
CLDND1-212ENST00000506885 NDUFA4O00483 81 aa1.68□□□□□ -2.14
CLDND1-212ENST00000506885 C10orf95Q9H7T3 257 aa1.68□□□□□ -2.14
CLDND1-212ENST00000506885 SRRM2Q9UQ35 2752 aaKnown RBP1.68□□□□□ -2.14
CLDND1-212ENST00000506885 IGLV5-48A0A075B6I7 105 aa1.67□□□□□ -2.14
CLDND1-212ENST00000506885 KRTAP10-4P60372 401 aaPredicted RBP1.67□□□□□ -2.14
CLDND1-212ENST00000506885 COX6A2Q02221 97 aa1.67□□□□□ -2.14
CLDND1-212ENST00000506885 DEFB136Q30KP8 78 aa1.67□□□□□ -2.14
CLDND1-212ENST00000506885 TP53AIP1Q9HCN2 124 aa1.67□□□□□ -2.14
CLDND1-212ENST00000506885 HUWE1Q7Z6Z7 4374 aaKnown RBP1.66□□□□□ -2.14
CLDND1-212ENST00000506885 KMT2AQ03164 3969 aa1.66□□□□□ -2.14
CLDND1-212ENST00000506885 LEAP2Q969E1 77 aa1.66□□□□□ -2.14
CLDND1-212ENST00000506885 KAAG1Q9UBP8 84 aa1.66□□□□□ -2.14
CLDND1-212ENST00000506885 DNAH10Q8IVF4 4471 aa1.65□□□□□ -2.14
CLDND1-212ENST00000506885 A0A0D9SG42 100 aa1.65□□□□□ -2.15
CLDND1-212ENST00000506885 LINC00158P58513 81 aa1.65□□□□□ -2.15
CLDND1-212ENST00000506885 PKHD1P08F94 4074 aa1.64□□□□□ -2.15
CLDND1-212ENST00000506885 DEFB131BA0A096LNP1 70 aa1.64□□□□□ -2.15
CLDND1-212ENST00000506885 MINOS1Q5TGZ0 78 aa1.64□□□□□ -2.15
CLDND1-212ENST00000506885 Q5VSD8 79 aa1.64□□□□□ -2.15
CLDND1-212ENST00000506885 PLECQ15149 4684 aaKnown RBP1.64□□□□□ -2.15
CLDND1-212ENST00000506885 Q8IZM0 81 aa1.63□□□□□ -2.15
CLDND1-212ENST00000506885 HSPG2P98160 4391 aa1.62□□□□□ -2.15
CLDND1-212ENST00000506885 RNF213Q63HN8 5207 aa1.61□□□□□ -2.15
CLDND1-212ENST00000506885 CRIPTQ9P021 101 aa1.61□□□□□ -2.15
CLDND1-212ENST00000506885 APLNQ9ULZ1 77 aa1.61□□□□□ -2.15
CLDND1-212ENST00000506885 DEFB135Q30KP9 77 aa1.6□□□□□ -2.15
CLDND1-212ENST00000506885 DNAH6Q9C0G6 4158 aa1.6□□□□□ -2.15
CLDND1-212ENST00000506885 K7EQZ3 153 aa1.59□□□□□ -2.15
CLDND1-212ENST00000506885 SMR3BP02814 79 aaPredicted RBP1.59□□□□□ -2.15
CLDND1-212ENST00000506885 DEFB104AQ8WTQ1 72 aa1.59□□□□□ -2.15
CLDND1-212ENST00000506885 USMG5Q96IX5 58 aa1.59□□□□□ -2.15
CLDND1-212ENST00000506885 PRO0255Q9UI72 69 aa1.59□□□□□ -2.15
CLDND1-212ENST00000506885 PKD1P98161 4303 aa1.59□□□□□ -2.16
CLDND1-212ENST00000506885 DNAH11Q96DT5 4516 aa1.59□□□□□ -2.16
CLDND1-212ENST00000506885 FAT2Q9NYQ8 4349 aa1.58□□□□□ -2.16
CLDND1-212ENST00000506885 H3BUA1 57 aa1.58□□□□□ -2.16
CLDND1-212ENST00000506885 APELAP0DMC3 54 aa1.58□□□□□ -2.16
CLDND1-212ENST00000506885 MYCBP2O75592 4640 aa1.58□□□□□ -2.16
CLDND1-212ENST00000506885 VPS13BQ7Z7G8 4022 aa1.57□□□□□ -2.16
CLDND1-212ENST00000506885 DNAH17Q9UFH2 4485 aa1.57□□□□□ -2.16
CLDND1-212ENST00000506885 VPS13DQ5THJ4 4388 aa1.57□□□□□ -2.16
CLDND1-212ENST00000506885 DNAH2Q9P225 4427 aa1.57□□□□□ -2.16
CLDND1-212ENST00000506885 DYNC1H1Q14204 4646 aaKnown RBP1.57□□□□□ -2.16
CLDND1-212ENST00000506885 APOBP04114 4563 aaKnown RBP1.56□□□□□ -2.16
CLDND1-212ENST00000506885 HMCN2Q8NDA2 5059 aa1.56□□□□□ -2.16
CLDND1-212ENST00000506885 DEFB4AO15263 64 aa1.56□□□□□ -2.16
CLDND1-212ENST00000506885 SPRR1AP35321 89 aa1.55□□□□□ -2.16
CLDND1-212ENST00000506885 DEFB1P60022 68 aa1.55□□□□□ -2.16
CLDND1-212ENST00000506885 CRCT1Q9UGL9 99 aa1.55□□□□□ -2.16
CLDND1-212ENST00000506885 MMP24-AS1A0A0U1RRL7 71 aa1.54□□□□□ -2.16
CLDND1-212ENST00000506885 RHPN1-AS1Q9BWJ2 59 aa1.54□□□□□ -2.16
CLDND1-212ENST00000506885 MUC2Q02817 5179 aa1.54□□□□□ -2.16
CLDND1-212ENST00000506885 HTN3P15516 51 aa1.53□□□□□ -2.16
CLDND1-212ENST00000506885 DEFB131AP59861 70 aa1.53□□□□□ -2.16
CLDND1-212ENST00000506885 LELP1Q5T871 98 aa1.53□□□□□ -2.16
CLDND1-212ENST00000506885 CLPSL2Q6UWE3 100 aa1.53□□□□□ -2.16
CLDND1-212ENST00000506885 TOMM7Q9P0U1 55 aa1.53□□□□□ -2.16
CLDND1-212ENST00000506885 LRP1BQ9NZR2 4599 aa1.53□□□□□ -2.16
CLDND1-212ENST00000506885 DNAH5Q8TE73 4624 aa1.52□□□□□ -2.17
CLDND1-212ENST00000506885 KRTAP4-1Q9BYQ7 146 aa1.52□□□□□ -2.17
CLDND1-212ENST00000506885 SPART-AS1P0CW21 52 aa1.51□□□□□ -2.17
CLDND1-212ENST00000506885 SPRR1BP22528 89 aa1.5□□□□□ -2.17
CLDND1-212ENST00000506885 MRPL34Q9BQ48 92 aaKnown RBP1.5□□□□□ -2.17
CLDND1-212ENST00000506885 FAT4Q6V0I7 4981 aa1.5□□□□□ -2.17
CLDND1-212ENST00000506885 WFDC13Q8IUB5 93 aa1.49□□□□□ -2.17
CLDND1-212ENST00000506885 C6orf48Q9UBA6 75 aa1.49□□□□□ -2.17
CLDND1-212ENST00000506885 PKHD1L1Q86WI1 4243 aa1.49□□□□□ -2.17
CLDND1-212ENST00000506885 H0YAA0 97 aa1.48□□□□□ -2.17
CLDND1-212ENST00000506885 MT1HL1P0DM35 61 aa1.47□□□□□ -2.17
CLDND1-212ENST00000506885 LRP2P98164 4655 aa1.47□□□□□ -2.17
CLDND1-212ENST00000506885 WFDC10BQ8IUB3 73 aa1.47□□□□□ -2.17
CLDND1-212ENST00000506885 FAT1Q14517 4588 aa1.47□□□□□ -2.17
CLDND1-212ENST00000506885 COX6B2Q6YFQ2 88 aa1.46□□□□□ -2.18
CLDND1-212ENST00000506885 FSIP2Q5CZC0 6907 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms