RNA–Protein interactions for RNA: ENST00000506626.1

SMAD1-205, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-205ENST00000506626 SVEP1Q4LDE5 3571 aa1.6□□□□□ -2.15
SMAD1-205ENST00000506626 NIPBLQ6KC79 2804 aaeCLIP1.6□□□□□ -2.15
SMAD1-205ENST00000506626 ANK3Q12955 4377 aaKnown RBP1.59□□□□□ -2.15
SMAD1-205ENST00000506626 HELZ2Q9BYK8 2649 aaKnown RBP1.59□□□□□ -2.15
SMAD1-205ENST00000506626 HECTD1Q9ULT8 2610 aa1.59□□□□□ -2.15
SMAD1-205ENST00000506626 Q5VSD8 79 aa1.59□□□□□ -2.15
SMAD1-205ENST00000506626 VPS13CQ709C8 3753 aa1.58□□□□□ -2.16
SMAD1-205ENST00000506626 HIVEP1P15822 2718 aa1.58□□□□□ -2.16
SMAD1-205ENST00000506626 LRRK2Q5S007 2527 aa1.58□□□□□ -2.16
SMAD1-205ENST00000506626 SETD2Q9BYW2 2564 aaPredicted RBP1.58□□□□□ -2.16
SMAD1-205ENST00000506626 ACANP16112 2415 aa1.57□□□□□ -2.16
SMAD1-205ENST00000506626 TRRAPQ9Y4A5 3859 aa1.57□□□□□ -2.16
SMAD1-205ENST00000506626 MUC3AQ02505 3323 aa1.57□□□□□ -2.16
SMAD1-205ENST00000506626 CFAP46Q8IYW2 2715 aa1.57□□□□□ -2.16
SMAD1-205ENST00000506626 BAHCC1Q9P281 2608 aa1.56□□□□□ -2.16
SMAD1-205ENST00000506626 ACACBO00763 2458 aa1.56□□□□□ -2.16
SMAD1-205ENST00000506626 FRAS1Q86XX4 4008 aa1.56□□□□□ -2.16
SMAD1-205ENST00000506626 CSMD2Q7Z408 3487 aa1.55□□□□□ -2.16
SMAD1-205ENST00000506626 CACNA1AO00555 2505 aa1.55□□□□□ -2.16
SMAD1-205ENST00000506626 TGP01266 2768 aa1.55□□□□□ -2.16
SMAD1-205ENST00000506626 HMCN1Q96RW7 5635 aa1.55□□□□□ -2.16
SMAD1-205ENST00000506626 ANK2Q01484 3957 aa1.55□□□□□ -2.16
SMAD1-205ENST00000506626 EPG5Q9HCE0 2579 aa1.54□□□□□ -2.16
SMAD1-205ENST00000506626 CSMD3Q7Z407 3707 aa1.54□□□□□ -2.16
SMAD1-205ENST00000506626 FASNP49327 2511 aaKnown RBP1.54□□□□□ -2.16
SMAD1-205ENST00000506626 ABCA12Q86UK0 2595 aa1.54□□□□□ -2.16
SMAD1-205ENST00000506626 NBEAL1Q6ZS30 2694 aa1.54□□□□□ -2.16
SMAD1-205ENST00000506626 PDZD2O15018 2839 aa1.53□□□□□ -2.16
SMAD1-205ENST00000506626 CUBNO60494 3623 aa1.53□□□□□ -2.16
SMAD1-205ENST00000506626 FBN2P35556 2912 aa1.53□□□□□ -2.16
SMAD1-205ENST00000506626 DNAH8Q96JB1 4490 aa1.53□□□□□ -2.16
SMAD1-205ENST00000506626 POLQO75417 2590 aa1.53□□□□□ -2.17
SMAD1-205ENST00000506626 ITPR3Q14573 2671 aa1.52□□□□□ -2.17
SMAD1-205ENST00000506626 USP9YO00507 2555 aaPredicted RBP1.52□□□□□ -2.17
SMAD1-205ENST00000506626 SMR3AQ99954 134 aa1.52□□□□□ -2.17
SMAD1-205ENST00000506626 ZANQ9Y493 2812 aa1.52□□□□□ -2.17
SMAD1-205ENST00000506626 COL7A1Q02388 2944 aa1.5□□□□□ -2.17
SMAD1-205ENST00000506626 BDP1A6H8Y1 2624 aa1.5□□□□□ -2.17
SMAD1-205ENST00000506626 LYSTQ99698 3801 aa1.5□□□□□ -2.17
SMAD1-205ENST00000506626 DYNC2H1Q8NCM8 4307 aaKnown RBP1.5□□□□□ -2.17
SMAD1-205ENST00000506626 ZNF292O60281 2723 aa1.5□□□□□ -2.17
SMAD1-205ENST00000506626 DNAH11Q96DT5 4516 aa1.5□□□□□ -2.17
SMAD1-205ENST00000506626 PKD1L1Q8TDX9 2849 aa1.49□□□□□ -2.17
SMAD1-205ENST00000506626 C9orf92A6NGG3 77 aa1.49□□□□□ -2.17
SMAD1-205ENST00000506626 TNP1P09430 55 aa1.49□□□□□ -2.17
SMAD1-205ENST00000506626 KRTAP12-4P60329 112 aa1.49□□□□□ -2.17
SMAD1-205ENST00000506626 PRKDCP78527 4128 aaKnown RBP1.49□□□□□ -2.17
SMAD1-205ENST00000506626 DNAH3Q8TD57 4116 aa1.49□□□□□ -2.17
SMAD1-205ENST00000506626 ITPR2Q14571 2701 aa1.48□□□□□ -2.17
SMAD1-205ENST00000506626 STAB2Q8WWQ8 2551 aa1.48□□□□□ -2.17
SMAD1-205ENST00000506626 DNAH17Q9UFH2 4485 aa1.48□□□□□ -2.17
SMAD1-205ENST00000506626 ATRQ13535 2644 aa1.48□□□□□ -2.17
SMAD1-205ENST00000506626 DNAH7Q8WXX0 4024 aa1.48□□□□□ -2.17
SMAD1-205ENST00000506626 FBN3Q75N90 2809 aa1.48□□□□□ -2.17
SMAD1-205ENST00000506626 DNAH6Q9C0G6 4158 aa1.47□□□□□ -2.17
SMAD1-205ENST00000506626 NOTCH1P46531 2555 aa1.47□□□□□ -2.17
SMAD1-205ENST00000506626 MYO18BQ8IUG5 2567 aa1.47□□□□□ -2.17
SMAD1-205ENST00000506626 DNAH10Q8IVF4 4471 aa1.47□□□□□ -2.17
SMAD1-205ENST00000506626 TENM3Q9P273 2699 aa1.47□□□□□ -2.17
SMAD1-205ENST00000506626 DNAH9Q9NYC9 4486 aa1.47□□□□□ -2.17
SMAD1-205ENST00000506626 MYCBP2O75592 4640 aa1.47□□□□□ -2.17
SMAD1-205ENST00000506626 CMYA5Q8N3K9 4069 aa1.46□□□□□ -2.18
SMAD1-205ENST00000506626 NSD1Q96L73 2696 aaPredicted RBP1.44□□□□□ -2.18
SMAD1-205ENST00000506626 FLNAP21333 2647 aaKnown RBP1.44□□□□□ -2.18
SMAD1-205ENST00000506626 TEP1Q99973 2627 aaKnown RBP1.43□□□□□ -2.18
SMAD1-205ENST00000506626 USP24Q9UPU5 2620 aa1.43□□□□□ -2.18
SMAD1-205ENST00000506626 DNAH2Q9P225 4427 aa1.43□□□□□ -2.18
SMAD1-205ENST00000506626 HUWE1Q7Z6Z7 4374 aaKnown RBP1.43□□□□□ -2.18
SMAD1-205ENST00000506626 MAST4O15021 2626 aa1.42□□□□□ -2.18
SMAD1-205ENST00000506626 KRTAP12-3P60328 96 aa1.42□□□□□ -2.18
SMAD1-205ENST00000506626 FCGBPQ9Y6R7 5405 aaPredicted RBP1.41□□□□□ -2.18
SMAD1-205ENST00000506626 KMT2AQ03164 3969 aa1.41□□□□□ -2.18
SMAD1-205ENST00000506626 HECTD4Q9Y4D8 3996 aa1.41□□□□□ -2.18
SMAD1-205ENST00000506626 MGAM2Q2M2H8 2515 aa1.4□□□□□ -2.19
SMAD1-205ENST00000506626 SACSQ9NZJ4 4579 aa1.4□□□□□ -2.19
SMAD1-205ENST00000506626 IGSF10Q6WRI0 2623 aa1.39□□□□□ -2.19
SMAD1-205ENST00000506626 STAB1Q9NY15 2570 aa1.39□□□□□ -2.19
SMAD1-205ENST00000506626 FLNCQ14315 2725 aa1.38□□□□□ -2.19
SMAD1-205ENST00000506626 FLNBO75369 2602 aaKnown RBP1.37□□□□□ -2.19
SMAD1-205ENST00000506626 TENM1Q9UKZ4 2725 aa1.37□□□□□ -2.19
SMAD1-205ENST00000506626 ZNF469Q96JG9 3925 aaPredicted RBP1.36□□□□□ -2.19
SMAD1-205ENST00000506626 APOBP04114 4563 aaKnown RBP1.34□□□□□ -2.19
SMAD1-205ENST00000506626 PKHD1L1Q86WI1 4243 aa1.34□□□□□ -2.2
SMAD1-205ENST00000506626 LRP1Q07954 4544 aaKnown RBP1.34□□□□□ -2.2
SMAD1-205ENST00000506626 STARD9Q9P2P6 4700 aa1.33□□□□□ -2.2
SMAD1-205ENST00000506626 PKD1P98161 4303 aa1.33□□□□□ -2.2
SMAD1-205ENST00000506626 PLECQ15149 4684 aaKnown RBP1.33□□□□□ -2.2
SMAD1-205ENST00000506626 FLGP20930 4061 aaPredicted RBP1.32□□□□□ -2.2
SMAD1-205ENST00000506626 KRTAP8-1Q8IUC2 63 aa1.32□□□□□ -2.2
SMAD1-205ENST00000506626 PKHD1P08F94 4074 aa1.32□□□□□ -2.2
SMAD1-205ENST00000506626 TNXBP22105 4242 aa1.31□□□□□ -2.2
SMAD1-205ENST00000506626 DNAH5Q8TE73 4624 aa1.3□□□□□ -2.2
SMAD1-205ENST00000506626 KRTAP10-4P60372 401 aaPredicted RBP1.3□□□□□ -2.2
SMAD1-205ENST00000506626 FAT2Q9NYQ8 4349 aa1.29□□□□□ -2.2
SMAD1-205ENST00000506626 LRP1BQ9NZR2 4599 aa1.29□□□□□ -2.2
SMAD1-205ENST00000506626 VPS13BQ7Z7G8 4022 aa1.29□□□□□ -2.2
SMAD1-205ENST00000506626 HSPG2P98160 4391 aa1.29□□□□□ -2.2
SMAD1-205ENST00000506626 DYNC1H1Q14204 4646 aaKnown RBP1.28□□□□□ -2.21
SMAD1-205ENST00000506626 FAT3Q8TDW7 4589 aa1.26□□□□□ -2.21
SMAD1-205ENST00000506626 KRTAP2-3P0C7H8 128 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms