RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.87□□□□□ -2.11
HERC4-213ENST00000506515 NPC2P61916 151 aa1.86□□□□□ -2.11
HERC4-213ENST00000506515 PMCHL1Q16048 86 aa1.86□□□□□ -2.11
HERC4-213ENST00000506515 CYSTM1Q9H1C7 97 aa1.86□□□□□ -2.11
HERC4-213ENST00000506515 IGKV3D-7A0A0C4DH55 119 aa1.85□□□□□ -2.11
HERC4-213ENST00000506515 SPINK7P58062 85 aa1.85□□□□□ -2.11
HERC4-213ENST00000506515 BVES-AS1Q5T3Y7 98 aa1.85□□□□□ -2.11
HERC4-213ENST00000506515 LINC00575Q6W349 94 aa1.85□□□□□ -2.11
HERC4-213ENST00000506515 IMUPQ9GZP8 106 aa1.85□□□□□ -2.11
HERC4-213ENST00000506515 TMEM218A2RU14 115 aa1.84□□□□□ -2.11
HERC4-213ENST00000506515 Q5VV11 94 aa1.84□□□□□ -2.11
HERC4-213ENST00000506515 Q6ZQY7 126 aa1.84□□□□□ -2.11
HERC4-213ENST00000506515 WFDC13Q8IUB5 93 aa1.84□□□□□ -2.11
HERC4-213ENST00000506515 NDUFB1O75438 58 aa1.83□□□□□ -2.12
HERC4-213ENST00000506515 H1FX-AS1Q4G0G2 97 aa1.83□□□□□ -2.12
HERC4-213ENST00000506515 Q6ZQT0 140 aa1.83□□□□□ -2.12
HERC4-213ENST00000506515 RAB37Q96AX2 223 aa1.83□□□□□ -2.12
HERC4-213ENST00000506515 HIST1H2BLQ99880 126 aa1.83□□□□□ -2.12
HERC4-213ENST00000506515 A0A087WSZ3 146 aa1.82□□□□□ -2.12
HERC4-213ENST00000506515 H0YGX0 51 aa1.82□□□□□ -2.12
HERC4-213ENST00000506515 J3KT08 172 aa1.82□□□□□ -2.12
HERC4-213ENST00000506515 SMIM11BQ8TCY0 68 aa1.82□□□□□ -2.12
HERC4-213ENST00000506515 TRBV7-4A0A0J9YYF1 115 aa1.81□□□□□ -2.12
HERC4-213ENST00000506515 FAM236AA0A1B0GUQ0 79 aa1.81□□□□□ -2.12
HERC4-213ENST00000506515 FAM236BA0A1B0GV22 79 aa1.81□□□□□ -2.12
HERC4-213ENST00000506515 LINC01545Q5VT33 79 aa1.81□□□□□ -2.12
HERC4-213ENST00000506515 SMIM20Q8N5G0 67 aa1.81□□□□□ -2.12
HERC4-213ENST00000506515 H3BMG7 143 aa1.8□□□□□ -2.12
HERC4-213ENST00000506515 CLLU1Q5K131 121 aa1.8□□□□□ -2.12
HERC4-213ENST00000506515 CRIPTQ9P021 101 aa1.8□□□□□ -2.12
HERC4-213ENST00000506515 A0A1B0GX51 115 aa1.79□□□□□ -2.12
HERC4-213ENST00000506515 TAX1BP3O14907 124 aa1.79□□□□□ -2.12
HERC4-213ENST00000506515 FABP4P15090 132 aa1.79□□□□□ -2.12
HERC4-213ENST00000506515 SPRR2EP22531 72 aa1.79□□□□□ -2.12
HERC4-213ENST00000506515 SPRR2BP35325 72 aa1.79□□□□□ -2.12
HERC4-213ENST00000506515 SPRR2AP35326 72 aa1.79□□□□□ -2.12
HERC4-213ENST00000506515 MUSTN1Q8IVN3 82 aa1.79□□□□□ -2.12
HERC4-213ENST00000506515 SVBPQ8N300 66 aa1.79□□□□□ -2.12
HERC4-213ENST00000506515 H3BUT2 72 aa1.78□□□□□ -2.12
HERC4-213ENST00000506515 CSAG1Q6PB30 78 aa1.78□□□□□ -2.12
HERC4-213ENST00000506515 LOC105371267A0A1B0GV96 52 aa1.77□□□□□ -2.13
HERC4-213ENST00000506515 SYS1-DBNDD2H3BUS1 97 aa1.77□□□□□ -2.13
HERC4-213ENST00000506515 TMEM256-PLSCR3K7ERE1 68 aa1.77□□□□□ -2.13
HERC4-213ENST00000506515 TRACP01848 142 aa1.77□□□□□ -2.13
HERC4-213ENST00000506515 BAALC-AS2P0C853 105 aa1.77□□□□□ -2.13
HERC4-213ENST00000506515 FABP2P12104 132 aa1.77□□□□□ -2.13
HERC4-213ENST00000506515 PRR15Q8IV56 129 aa1.77□□□□□ -2.13
HERC4-213ENST00000506515 SPRR2FQ96RM1 72 aa1.77□□□□□ -2.13
HERC4-213ENST00000506515 SPRR2GQ9BYE4 73 aa1.77□□□□□ -2.13
HERC4-213ENST00000506515 LINC00472Q9H8W2 130 aa1.77□□□□□ -2.13
HERC4-213ENST00000506515 KRTAP19-8Q3LI54 63 aa1.76□□□□□ -2.13
HERC4-213ENST00000506515 PMCHL2Q9BQD1 86 aa1.76□□□□□ -2.13
HERC4-213ENST00000506515 DNAL4O96015 105 aa1.75□□□□□ -2.13
HERC4-213ENST00000506515 APOC3P02656 99 aa1.75□□□□□ -2.13
HERC4-213ENST00000506515 SPRR2DP22532 72 aa1.75□□□□□ -2.13
HERC4-213ENST00000506515 CCKP06307 115 aa1.74□□□□□ -2.13
HERC4-213ENST00000506515 KRTAP8-1Q8IUC2 63 aa1.74□□□□□ -2.13
HERC4-213ENST00000506515 K7EQZ3 153 aa1.73□□□□□ -2.13
HERC4-213ENST00000506515 ORMDL1Q9P0S3 153 aa1.73□□□□□ -2.13
HERC4-213ENST00000506515 A0A1B0GV72 72 aa1.72□□□□□ -2.13
HERC4-213ENST00000506515 MT1BP07438 61 aa1.72□□□□□ -2.13
HERC4-213ENST00000506515 COX6CP09669 75 aa1.72□□□□□ -2.13
HERC4-213ENST00000506515 KLKP1Q107X0 134 aa1.72□□□□□ -2.13
HERC4-213ENST00000506515 SNURFQ9Y675 71 aa1.72□□□□□ -2.13
HERC4-213ENST00000506515 PDE6GP18545 87 aa1.71□□□□□ -2.14
HERC4-213ENST00000506515 RBM3P98179 157 aaKnown RBP1.71□□□□□ -2.14
HERC4-213ENST00000506515 PLAC4Q8WY50 150 aa1.71□□□□□ -2.14
HERC4-213ENST00000506515 C14orf132Q9NPU4 83 aa1.71□□□□□ -2.14
HERC4-213ENST00000506515 C9JAW5 83 aa1.7□□□□□ -2.14
HERC4-213ENST00000506515 DSTQ03001 7570 aaKnown RBP1.7□□□□□ -2.14
HERC4-213ENST00000506515 KRTDAPP60985 99 aa1.69□□□□□ -2.14
HERC4-213ENST00000506515 TMEM254Q8TBM7 123 aa1.69□□□□□ -2.14
HERC4-213ENST00000506515 MRPL34Q9BQ48 92 aaKnown RBP1.69□□□□□ -2.14
HERC4-213ENST00000506515 VPS25Q9BRG1 176 aa1.69□□□□□ -2.14
HERC4-213ENST00000506515 S4R3F8 94 aa1.69□□□□□ -2.14
HERC4-213ENST00000506515 S100A1P23297 94 aa1.68□□□□□ -2.14
HERC4-213ENST00000506515 PRO1854Q9UHT4 67 aa1.68□□□□□ -2.14
HERC4-213ENST00000506515 hDV103S1A0JD37 113 aa1.67□□□□□ -2.14
HERC4-213ENST00000506515 JMJD7-PLA2G4BH0Y9G9 81 aa1.67□□□□□ -2.14
HERC4-213ENST00000506515 NREPQ16612 68 aa1.66□□□□□ -2.14
HERC4-213ENST00000506515 DLEU1O43261 78 aa1.65□□□□□ -2.15
HERC4-213ENST00000506515 H0YAA0 97 aa1.64□□□□□ -2.15
HERC4-213ENST00000506515 ROMO1P60602 79 aa1.64□□□□□ -2.15
HERC4-213ENST00000506515 C20orf197Q8N268 126 aa1.64□□□□□ -2.15
HERC4-213ENST00000506515 NDUFC1O43677 76 aa1.63□□□□□ -2.15
HERC4-213ENST00000506515 HIST1H2BKO60814 126 aa1.63□□□□□ -2.15
HERC4-213ENST00000506515 HIST1H2BJP06899 126 aa1.63□□□□□ -2.15
HERC4-213ENST00000506515 HIGD1BQ9P298 99 aa1.63□□□□□ -2.15
HERC4-213ENST00000506515 ATOH7Q8N100 152 aa1.62□□□□□ -2.15
HERC4-213ENST00000506515 HMCN1Q96RW7 5635 aa1.62□□□□□ -2.15
HERC4-213ENST00000506515 AHNAK2Q8IVF2 5795 aa1.61□□□□□ -2.15
HERC4-213ENST00000506515 LOC110117498A0A087WWA1 95 aa1.61□□□□□ -2.15
HERC4-213ENST00000506515 HCG22E2RYF7 251 aa1.61□□□□□ -2.15
HERC4-213ENST00000506515 TSTD3H0UI37 97 aa1.61□□□□□ -2.15
HERC4-213ENST00000506515 K7ERJ3 54 aa1.61□□□□□ -2.15
HERC4-213ENST00000506515 COX8AP10176 69 aa1.61□□□□□ -2.15
HERC4-213ENST00000506515 VAMP8Q9BV40 100 aa1.61□□□□□ -2.15
HERC4-213ENST00000506515 TP53AIP1Q9HCN2 124 aa1.61□□□□□ -2.15
HERC4-213ENST00000506515 CASC2Q6XLA1 102 aa1.6□□□□□ -2.15
HERC4-213ENST00000506515 MMP24-AS1A0A0U1RRL7 71 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms