RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 DMXL1Q9Y485 3027 aa0.64□□□□□ -2.31
LINC01088-202ENST00000505149 LRRK2Q5S007 2527 aa0.64□□□□□ -2.31
LINC01088-202ENST00000505149 ACANP16112 2415 aa0.64□□□□□ -2.31
LINC01088-202ENST00000505149 HUWE1Q7Z6Z7 4374 aaKnown RBP0.64□□□□□ -2.31
LINC01088-202ENST00000505149 PKD1P98161 4303 aa0.63□□□□□ -2.31
LINC01088-202ENST00000505149 PRUNE2Q8WUY3 3088 aa0.63□□□□□ -2.31
LINC01088-202ENST00000505149 SMR3BP02814 79 aaPredicted RBP0.63□□□□□ -2.31
LINC01088-202ENST00000505149 HTN3P15516 51 aa0.63□□□□□ -2.31
LINC01088-202ENST00000505149 CEP350Q5VT06 3117 aa0.63□□□□□ -2.31
LINC01088-202ENST00000505149 ZZEF1O43149 2961 aa0.63□□□□□ -2.31
LINC01088-202ENST00000505149 TACC2O95359 2948 aa0.62□□□□□ -2.31
LINC01088-202ENST00000505149 USP9YO00507 2555 aaPredicted RBP0.62□□□□□ -2.31
LINC01088-202ENST00000505149 DNAH9Q9NYC9 4486 aa0.62□□□□□ -2.31
LINC01088-202ENST00000505149 WDR87Q6ZQQ6 2873 aa0.62□□□□□ -2.31
LINC01088-202ENST00000505149 APOBP04114 4563 aaKnown RBP0.62□□□□□ -2.31
LINC01088-202ENST00000505149 ITPR3Q14573 2671 aa0.61□□□□□ -2.31
LINC01088-202ENST00000505149 NSD1Q96L73 2696 aaPredicted RBP0.61□□□□□ -2.31
LINC01088-202ENST00000505149 SPRR2DP22532 72 aa0.61□□□□□ -2.31
LINC01088-202ENST00000505149 HTTP42858 3142 aa0.61□□□□□ -2.31
LINC01088-202ENST00000505149 DNAH6Q9C0G6 4158 aa0.61□□□□□ -2.31
LINC01088-202ENST00000505149 SVEP1Q4LDE5 3571 aa0.61□□□□□ -2.31
LINC01088-202ENST00000505149 CACNA1AO00555 2505 aa0.61□□□□□ -2.31
LINC01088-202ENST00000505149 ANKHD1Q8IWZ3 2542 aaKnown RBP0.61□□□□□ -2.31
LINC01088-202ENST00000505149 SYNE1Q8NF91 8797 aaKnown RBP0.61□□□□□ -2.31
LINC01088-202ENST00000505149 DNAH1Q9P2D7 4330 aa0.6□□□□□ -2.31
LINC01088-202ENST00000505149 LRP1Q07954 4544 aaKnown RBP0.6□□□□□ -2.31
LINC01088-202ENST00000505149 CSMD1Q96PZ7 3565 aa0.6□□□□□ -2.31
LINC01088-202ENST00000505149 DNAH12Q6ZR08 3092 aa0.6□□□□□ -2.31
LINC01088-202ENST00000505149 PKD1L1Q8TDX9 2849 aa0.6□□□□□ -2.31
LINC01088-202ENST00000505149 MT1AP04731 61 aa0.6□□□□□ -2.31
LINC01088-202ENST00000505149 DMDP11532 3685 aa0.6□□□□□ -2.31
LINC01088-202ENST00000505149 SETXQ7Z333 2677 aaKnown RBP0.6□□□□□ -2.31
LINC01088-202ENST00000505149 SONP18583 2426 aaKnown RBP0.59□□□□□ -2.31
LINC01088-202ENST00000505149 SMG1Q96Q15 3661 aaKnown RBP0.59□□□□□ -2.31
LINC01088-202ENST00000505149 PLECQ15149 4684 aaKnown RBP0.59□□□□□ -2.31
LINC01088-202ENST00000505149 PKHD1P08F94 4074 aa0.59□□□□□ -2.31
LINC01088-202ENST00000505149 FAT1Q14517 4588 aa0.59□□□□□ -2.31
LINC01088-202ENST00000505149 SPRR2BP35325 72 aa0.59□□□□□ -2.31
LINC01088-202ENST00000505149 ACACBO00763 2458 aa0.59□□□□□ -2.32
LINC01088-202ENST00000505149 FREM2Q5SZK8 3169 aa0.59□□□□□ -2.32
LINC01088-202ENST00000505149 ZFYVE26Q68DK2 2539 aa0.59□□□□□ -2.32
LINC01088-202ENST00000505149 FLGP20930 4061 aaPredicted RBP0.59□□□□□ -2.32
LINC01088-202ENST00000505149 DCHS1Q96JQ0 3298 aa0.58□□□□□ -2.32
LINC01088-202ENST00000505149 SPG11Q96JI7 2443 aa0.58□□□□□ -2.32
LINC01088-202ENST00000505149 UNC79Q9P2D8 2635 aa0.58□□□□□ -2.32
LINC01088-202ENST00000505149 KRTAP19-5Q3LI72 72 aa0.58□□□□□ -2.32
LINC01088-202ENST00000505149 CMYA5Q8N3K9 4069 aa0.58□□□□□ -2.32
LINC01088-202ENST00000505149 NBEAL2Q6ZNJ1 2754 aa0.57□□□□□ -2.32
LINC01088-202ENST00000505149 DNAH17Q9UFH2 4485 aa0.57□□□□□ -2.32
LINC01088-202ENST00000505149 BOD1L1Q8NFC6 3051 aa0.57□□□□□ -2.32
LINC01088-202ENST00000505149 LPAP08519 4548 aa0.57□□□□□ -2.32
LINC01088-202ENST00000505149 KALRNO60229 2985 aa0.57□□□□□ -2.32
LINC01088-202ENST00000505149 ITPR1Q14643 2758 aa0.57□□□□□ -2.32
LINC01088-202ENST00000505149 ZANQ9Y493 2812 aa0.57□□□□□ -2.32
LINC01088-202ENST00000505149 AHNAKQ09666 5890 aaKnown RBP0.57□□□□□ -2.32
LINC01088-202ENST00000505149 SPEGQ15772 3267 aa0.57□□□□□ -2.32
LINC01088-202ENST00000505149 MUC3AQ02505 3323 aa0.57□□□□□ -2.32
LINC01088-202ENST00000505149 XIRP2A4UGR9 3374 aa0.57□□□□□ -2.32
LINC01088-202ENST00000505149 NBEAQ8NFP9 2946 aa0.57□□□□□ -2.32
LINC01088-202ENST00000505149 MUC5BQ9HC84 5762 aaPredicted RBP0.56□□□□□ -2.32
LINC01088-202ENST00000505149 SPRR2AP35326 72 aa0.56□□□□□ -2.32
LINC01088-202ENST00000505149 KRTAP6-2Q3LI66 62 aa0.56□□□□□ -2.32
LINC01088-202ENST00000505149 NIPBLQ6KC79 2804 aaeCLIP0.56□□□□□ -2.32
LINC01088-202ENST00000505149 LRBAP50851 2863 aa0.56□□□□□ -2.32
LINC01088-202ENST00000505149 FLNBO75369 2602 aaKnown RBP0.56□□□□□ -2.32
LINC01088-202ENST00000505149 ANKRD11Q6UB99 2663 aaPredicted RBP0.56□□□□□ -2.32
LINC01088-202ENST00000505149 DEFB4AO15263 64 aa0.55□□□□□ -2.32
LINC01088-202ENST00000505149 ADGRG4Q8IZF6 3080 aa0.55□□□□□ -2.32
LINC01088-202ENST00000505149 WDFY4Q6ZS81 3184 aa0.55□□□□□ -2.32
LINC01088-202ENST00000505149 HIVEP1P15822 2718 aa0.54□□□□□ -2.32
LINC01088-202ENST00000505149 TEX15Q9BXT5 2789 aa0.54□□□□□ -2.32
LINC01088-202ENST00000505149 LOC400499M0QZD8 3231 aa0.54□□□□□ -2.32
LINC01088-202ENST00000505149 FASNP49327 2511 aaKnown RBP0.54□□□□□ -2.32
LINC01088-202ENST00000505149 KRTAP21-1Q3LI58 79 aa0.54□□□□□ -2.32
LINC01088-202ENST00000505149 VPS13AQ96RL7 3174 aa0.54□□□□□ -2.32
LINC01088-202ENST00000505149 DNAH5Q8TE73 4624 aa0.54□□□□□ -2.32
LINC01088-202ENST00000505149 GOLGB1Q14789 3259 aaKnown RBP0.54□□□□□ -2.32
LINC01088-202ENST00000505149 SRCAPQ6ZRS2 3230 aa0.53□□□□□ -2.32
LINC01088-202ENST00000505149 LAMA3Q16787 3333 aa0.53□□□□□ -2.32
LINC01088-202ENST00000505149 CFAP46Q8IYW2 2715 aa0.53□□□□□ -2.32
LINC01088-202ENST00000505149 CSMD2Q7Z408 3487 aa0.53□□□□□ -2.32
LINC01088-202ENST00000505149 MAP1AP78559 2803 aaPredicted RBP0.53□□□□□ -2.32
LINC01088-202ENST00000505149 DYNC1H1Q14204 4646 aaKnown RBP0.53□□□□□ -2.33
LINC01088-202ENST00000505149 USP9XQ93008 2570 aaPredicted RBP0.52□□□□□ -2.33
LINC01088-202ENST00000505149 TEP1Q99973 2627 aaKnown RBP0.52□□□□□ -2.33
LINC01088-202ENST00000505149 TGP01266 2768 aa0.52□□□□□ -2.33
LINC01088-202ENST00000505149 TRRAPQ9Y4A5 3859 aa0.52□□□□□ -2.33
LINC01088-202ENST00000505149 TLN2Q9Y4G6 2542 aa0.52□□□□□ -2.33
LINC01088-202ENST00000505149 SPRR2FQ96RM1 72 aa0.52□□□□□ -2.33
LINC01088-202ENST00000505149 MYO18BQ8IUG5 2567 aa0.52□□□□□ -2.33
LINC01088-202ENST00000505149 HRNRQ86YZ3 2850 aaPredicted RBP0.52□□□□□ -2.33
LINC01088-202ENST00000505149 LRP1BQ9NZR2 4599 aa0.52□□□□□ -2.33
LINC01088-202ENST00000505149 FLNAP21333 2647 aaKnown RBP0.51□□□□□ -2.33
LINC01088-202ENST00000505149 MUC17Q685J3 4493 aa0.51□□□□□ -2.33
LINC01088-202ENST00000505149 DOPEY1Q5JWR5 2465 aa0.51□□□□□ -2.33
LINC01088-202ENST00000505149 VPS13CQ709C8 3753 aa0.51□□□□□ -2.33
LINC01088-202ENST00000505149 MDN1Q9NU22 5596 aa0.51□□□□□ -2.33
LINC01088-202ENST00000505149 UTRNP46939 3433 aa0.51□□□□□ -2.33
LINC01088-202ENST00000505149 ITPR2Q14571 2701 aa0.51□□□□□ -2.33
LINC01088-202ENST00000505149 CFAP47Q6ZTR5 3102 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms