RNA–Protein interactions for RNA: ENST00000504771.2

TNFAIP8-206, Transcript of TNF alpha induced protein 8, humanhuman

TSL 1 (best) BASIC

Gene TNFAIP8, Length 8,681 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP8-206ENST00000504771 KRTAP19-4Q3LI73 84 aa3.95□□□□□ -1.78
TNFAIP8-206ENST00000504771 MT1HL1P0DM35 61 aa3.91□□□□□ -1.78
TNFAIP8-206ENST00000504771 ALMS1Q8TCU4 4167 aa3.9□□□□□ -1.79
TNFAIP8-206ENST00000504771 LORP23490 312 aaPredicted RBP3.86□□□□□ -1.79
TNFAIP8-206ENST00000504771 KRTAP8-1Q8IUC2 63 aa3.81□□□□□ -1.8
TNFAIP8-206ENST00000504771 ZNF469Q96JG9 3925 aaPredicted RBP3.78□□□□□ -1.8
TNFAIP8-206ENST00000504771 KRTAP10-4P60372 401 aaPredicted RBP3.76□□□□□ -1.81
TNFAIP8-206ENST00000504771 BIRC6Q9NR09 4857 aa3.7□□□□□ -1.82
TNFAIP8-206ENST00000504771 PCLOQ9Y6V0 5065 aa3.67□□□□□ -1.82
TNFAIP8-206ENST00000504771 DNAH2Q9P225 4427 aa3.66□□□□□ -1.82
TNFAIP8-206ENST00000504771 ANK3Q12955 4377 aaKnown RBP3.65□□□□□ -1.82
TNFAIP8-206ENST00000504771 CMYA5Q8N3K9 4069 aa3.65□□□□□ -1.83
TNFAIP8-206ENST00000504771 LYSTQ99698 3801 aa3.65□□□□□ -1.83
TNFAIP8-206ENST00000504771 LCE3CQ5T5A8 94 aa3.63□□□□□ -1.83
TNFAIP8-206ENST00000504771 RYR2Q92736 4967 aa3.62□□□□□ -1.83
TNFAIP8-206ENST00000504771 KRTAP4-5Q9BYR2 181 aa3.6□□□□□ -1.83
TNFAIP8-206ENST00000504771 HUWE1Q7Z6Z7 4374 aaKnown RBP3.6□□□□□ -1.83
TNFAIP8-206ENST00000504771 SPRR2GQ9BYE4 73 aa3.58□□□□□ -1.84
TNFAIP8-206ENST00000504771 KRTAP19-5Q3LI72 72 aa3.56□□□□□ -1.84
TNFAIP8-206ENST00000504771 FRAS1Q86XX4 4008 aa3.52□□□□□ -1.85
TNFAIP8-206ENST00000504771 VPS13BQ7Z7G8 4022 aa3.49□□□□□ -1.85
TNFAIP8-206ENST00000504771 ANK2Q01484 3957 aa3.49□□□□□ -1.85
TNFAIP8-206ENST00000504771 KRTAP12-4P60329 112 aa3.48□□□□□ -1.85
TNFAIP8-206ENST00000504771 DNHD1Q96M86 4753 aa3.47□□□□□ -1.85
TNFAIP8-206ENST00000504771 KRTAP4-1Q9BYQ7 146 aa3.45□□□□□ -1.86
TNFAIP8-206ENST00000504771 DNAH3Q8TD57 4116 aa3.44□□□□□ -1.86
TNFAIP8-206ENST00000504771 HECTD4Q9Y4D8 3996 aa3.44□□□□□ -1.86
TNFAIP8-206ENST00000504771 HERC1Q15751 4861 aa3.44□□□□□ -1.86
TNFAIP8-206ENST00000504771 MT2AP02795 61 aa3.43□□□□□ -1.86
TNFAIP8-206ENST00000504771 MT1HP80294 61 aa3.43□□□□□ -1.86
TNFAIP8-206ENST00000504771 DNAH1Q9P2D7 4330 aa3.42□□□□□ -1.86
TNFAIP8-206ENST00000504771 HERC2O95714 4834 aa3.42□□□□□ -1.86
TNFAIP8-206ENST00000504771 SPRR2FQ96RM1 72 aa3.41□□□□□ -1.86
TNFAIP8-206ENST00000504771 DNAH8Q96JB1 4490 aa3.41□□□□□ -1.86
TNFAIP8-206ENST00000504771 KMT2AQ03164 3969 aa3.4□□□□□ -1.87
TNFAIP8-206ENST00000504771 DNAH7Q8WXX0 4024 aa3.38□□□□□ -1.87
TNFAIP8-206ENST00000504771 LCE3BQ5TA77 95 aa3.38□□□□□ -1.87
TNFAIP8-206ENST00000504771 ABCA13Q86UQ4 5058 aa3.36□□□□□ -1.87
TNFAIP8-206ENST00000504771 SPRR5A0A1B0GTR4 108 aa3.36□□□□□ -1.87
TNFAIP8-206ENST00000504771 MT1FP04733 61 aa3.36□□□□□ -1.87
TNFAIP8-206ENST00000504771 DNAH10Q8IVF4 4471 aa3.35□□□□□ -1.87
TNFAIP8-206ENST00000504771 RYR3Q15413 4870 aa3.33□□□□□ -1.88
TNFAIP8-206ENST00000504771 HYDINQ4G0P3 5121 aa3.32□□□□□ -1.88
TNFAIP8-206ENST00000504771 DYNC1H1Q14204 4646 aaKnown RBP3.31□□□□□ -1.88
TNFAIP8-206ENST00000504771 DNAH6Q9C0G6 4158 aa3.3□□□□□ -1.88
TNFAIP8-206ENST00000504771 SPRR2EP22531 72 aa3.3□□□□□ -1.88
TNFAIP8-206ENST00000504771 SPRR2BP35325 72 aa3.3□□□□□ -1.88
TNFAIP8-206ENST00000504771 SPRR2AP35326 72 aa3.3□□□□□ -1.88
TNFAIP8-206ENST00000504771 DNAH5Q8TE73 4624 aa3.29□□□□□ -1.88
TNFAIP8-206ENST00000504771 DNAH11Q96DT5 4516 aa3.29□□□□□ -1.88
TNFAIP8-206ENST00000504771 UBR4Q5T4S7 5183 aa3.27□□□□□ -1.89
TNFAIP8-206ENST00000504771 SPRR2DP22532 72 aa3.27□□□□□ -1.89
TNFAIP8-206ENST00000504771 FAT1Q14517 4588 aa3.27□□□□□ -1.89
TNFAIP8-206ENST00000504771 DNAH17Q9UFH2 4485 aa3.27□□□□□ -1.89
TNFAIP8-206ENST00000504771 LCE2BO14633 110 aa3.26□□□□□ -1.89
TNFAIP8-206ENST00000504771 LCE3DQ9BYE3 92 aa3.25□□□□□ -1.89
TNFAIP8-206ENST00000504771 DNAH9Q9NYC9 4486 aa3.25□□□□□ -1.89
TNFAIP8-206ENST00000504771 MT1GP13640 62 aa3.22□□□□□ -1.89
TNFAIP8-206ENST00000504771 KRTAP19-1Q8IUB9 90 aa3.21□□□□□ -1.9
TNFAIP8-206ENST00000504771 KRTAP19-8Q3LI54 63 aa3.21□□□□□ -1.9
TNFAIP8-206ENST00000504771 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
TNFAIP8-206ENST00000504771 FAT2Q9NYQ8 4349 aa3.2□□□□□ -1.9
TNFAIP8-206ENST00000504771 MT1XP80297 61 aa3.19□□□□□ -1.9
TNFAIP8-206ENST00000504771 KIAA1109Q2LD37 5005 aa3.19□□□□□ -1.9
TNFAIP8-206ENST00000504771 PLECQ15149 4684 aaKnown RBP3.18□□□□□ -1.9
TNFAIP8-206ENST00000504771 LRP1BQ9NZR2 4599 aa3.17□□□□□ -1.9
TNFAIP8-206ENST00000504771 DYNC2H1Q8NCM8 4307 aaKnown RBP3.15□□□□□ -1.91
TNFAIP8-206ENST00000504771 LCE2CQ5TA81 110 aa3.14□□□□□ -1.91
TNFAIP8-206ENST00000504771 PKHD1P08F94 4074 aa3.14□□□□□ -1.91
TNFAIP8-206ENST00000504771 STARD9Q9P2P6 4700 aa3.13□□□□□ -1.91
TNFAIP8-206ENST00000504771 PRKDCP78527 4128 aaKnown RBP3.13□□□□□ -1.91
TNFAIP8-206ENST00000504771 KMT2CQ8NEZ4 4911 aaKnown RBP3.13□□□□□ -1.91
TNFAIP8-206ENST00000504771 FLGP20930 4061 aaPredicted RBP3.12□□□□□ -1.91
TNFAIP8-206ENST00000504771 VPS13DQ5THJ4 4388 aa3.12□□□□□ -1.91
TNFAIP8-206ENST00000504771 APOBP04114 4563 aaKnown RBP3.11□□□□□ -1.91
TNFAIP8-206ENST00000504771 LRP1Q07954 4544 aaKnown RBP3.09□□□□□ -1.91
TNFAIP8-206ENST00000504771 FAT3Q8TDW7 4589 aa3.08□□□□□ -1.92
TNFAIP8-206ENST00000504771 MYCBP2O75592 4640 aa3.07□□□□□ -1.92
TNFAIP8-206ENST00000504771 EPPK1P58107 5090 aaKnown RBP3.07□□□□□ -1.92
TNFAIP8-206ENST00000504771 SACSQ9NZJ4 4579 aa3.06□□□□□ -1.92
TNFAIP8-206ENST00000504771 KRTAP4-8A0A0G2JLE6 195 aa3.04□□□□□ -1.92
TNFAIP8-206ENST00000504771 KRTAP4-8Q9BYQ9 185 aa3.04□□□□□ -1.92
TNFAIP8-206ENST00000504771 PRM1P04553 51 aa3.04□□□□□ -1.92
TNFAIP8-206ENST00000504771 MT1BP07438 61 aa3.04□□□□□ -1.92
TNFAIP8-206ENST00000504771 HMCN2Q8NDA2 5059 aa3.03□□□□□ -1.93
TNFAIP8-206ENST00000504771 KRTAP17-1Q9BYP8 105 aa3.01□□□□□ -1.93
TNFAIP8-206ENST00000504771 MT1LQ93083 61 aa3.01□□□□□ -1.93
TNFAIP8-206ENST00000504771 LCE2DQ5TA82 110 aaPredicted RBP2.99□□□□□ -1.93
TNFAIP8-206ENST00000504771 KRTAP9-8Q9BYQ0 159 aa2.95□□□□□ -1.94
TNFAIP8-206ENST00000504771 KRTAP19-3Q7Z4W3 81 aa2.94□□□□□ -1.94
TNFAIP8-206ENST00000504771 KRTAP4-7Q9BYR0 210 aa2.94□□□□□ -1.94
TNFAIP8-206ENST00000504771 PKHD1L1Q86WI1 4243 aa2.88□□□□□ -1.95
TNFAIP8-206ENST00000504771 KRTAP9-3Q9BYQ3 159 aa2.88□□□□□ -1.95
TNFAIP8-206ENST00000504771 MT1EP04732 61 aa2.88□□□□□ -1.95
TNFAIP8-206ENST00000504771 PKD1P98161 4303 aa2.85□□□□□ -1.95
TNFAIP8-206ENST00000504771 HSPG2P98160 4391 aa2.81□□□□□ -1.96
TNFAIP8-206ENST00000504771 RNF213Q63HN8 5207 aa2.81□□□□□ -1.96
TNFAIP8-206ENST00000504771 MT1MQ8N339 61 aa2.8□□□□□ -1.96
TNFAIP8-206ENST00000504771 USH2AO75445 5202 aa2.79□□□□□ -1.96
TNFAIP8-206ENST00000504771 LOC100996750A0A140TA64 210 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms