RNA–Protein interactions for RNA: ENST00000503252.1

LPCAT1-203, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 2

Gene LPCAT1, Length 2,694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-203ENST00000503252 FAT3Q8TDW7 4589 aa10.02□□□□□ -0.81
LPCAT1-203ENST00000503252 KRTAP10-8P60410 259 aa10□□□□□ -0.81
LPCAT1-203ENST00000503252 RYR1P21817 5038 aa9.98□□□□□ -0.81
LPCAT1-203ENST00000503252 KRTAP17-1Q9BYP8 105 aa9.97□□□□□ -0.81
LPCAT1-203ENST00000503252 KRTAP3-1Q9BYR8 98 aa9.9□□□□□ -0.82
LPCAT1-203ENST00000503252 DMBT1Q9UGM3 2413 aaPredicted RBP9.88□□□□□ -0.83
LPCAT1-203ENST00000503252 KIAA1109Q2LD37 5005 aa9.86□□□□□ -0.83
LPCAT1-203ENST00000503252 CRIPTQ9P021 101 aa9.83□□□□□ -0.84
LPCAT1-203ENST00000503252 MYCBP2O75592 4640 aa9.82□□□□□ -0.84
LPCAT1-203ENST00000503252 NDUFAF8A1L188 74 aa9.78□□□□□ -0.84
LPCAT1-203ENST00000503252 MT1HL1P0DM35 61 aa9.76□□□□□ -0.85
LPCAT1-203ENST00000503252 RPL37P61927 97 aaKnown RBP9.74□□□□□ -0.85
LPCAT1-203ENST00000503252 XP32Q5T750 250 aa9.74□□□□□ -0.85
LPCAT1-203ENST00000503252 COX6B2Q6YFQ2 88 aa9.74□□□□□ -0.85
LPCAT1-203ENST00000503252 EPPK1P58107 5090 aaKnown RBP9.72□□□□□ -0.85
LPCAT1-203ENST00000503252 SPINT4Q6UDR6 99 aa9.69□□□□□ -0.86
LPCAT1-203ENST00000503252 H0YAA0 97 aa9.68□□□□□ -0.86
LPCAT1-203ENST00000503252 KRTAP4-5Q9BYR2 181 aa9.51□□□□□ -0.89
LPCAT1-203ENST00000503252 A0A1B0GU33 70 aa9.5□□□□□ -0.89
LPCAT1-203ENST00000503252 KRTAP3-3Q9BYR6 98 aa9.49□□□□□ -0.89
LPCAT1-203ENST00000503252 KRTAP15-1Q3LI76 137 aa9.49□□□□□ -0.89
LPCAT1-203ENST00000503252 LPAP08519 4548 aa9.49□□□□□ -0.89
LPCAT1-203ENST00000503252 H1FX-AS1Q4G0G2 97 aa9.48□□□□□ -0.89
LPCAT1-203ENST00000503252 LRP2P98164 4655 aa9.48□□□□□ -0.89
LPCAT1-203ENST00000503252 TPRXLQ17RH7 258 aa9.44□□□□□ -0.9
LPCAT1-203ENST00000503252 ABCA13Q86UQ4 5058 aa9.44□□□□□ -0.9
LPCAT1-203ENST00000503252 S4R3F8 94 aa9.41□□□□□ -0.9
LPCAT1-203ENST00000503252 K7ERS5 55 aa9.4□□□□□ -0.9
LPCAT1-203ENST00000503252 LUZP6Q538Z0 58 aa9.37□□□□□ -0.91
LPCAT1-203ENST00000503252 KRTAP10-6P60371 365 aaPredicted RBP9.34□□□□□ -0.91
LPCAT1-203ENST00000503252 KRTAP3-2Q9BYR7 98 aa9.3□□□□□ -0.92
LPCAT1-203ENST00000503252 C10orf95Q9H7T3 257 aa9.25□□□□□ -0.93
LPCAT1-203ENST00000503252 KRTAP13-4Q3LI77 160 aa9.22□□□□□ -0.93
LPCAT1-203ENST00000503252 HERC2O95714 4834 aa9.17□□□□□ -0.94
LPCAT1-203ENST00000503252 J3QL48 77 aa9.15□□□□□ -0.94
LPCAT1-203ENST00000503252 A0A0D9SG42 100 aa9.12□□□□□ -0.95
LPCAT1-203ENST00000503252 SEC61BP60468 96 aaKnown RBP9.08□□□□□ -0.96
LPCAT1-203ENST00000503252 MUC17Q685J3 4493 aa9.07□□□□□ -0.96
LPCAT1-203ENST00000503252 KRTAP4-1Q9BYQ7 146 aa9.04□□□□□ -0.96
LPCAT1-203ENST00000503252 BIRC6Q9NR09 4857 aa9.01□□□□□ -0.97
LPCAT1-203ENST00000503252 KRTAP12-2P59991 146 aa8.89□□□□□ -0.99
LPCAT1-203ENST00000503252 M0QZ58 72 aa8.86□□□□□ -0.99
LPCAT1-203ENST00000503252 KRTAP12-1P59990 96 aa8.84□□□□□ -0.99
LPCAT1-203ENST00000503252 KRTAP19-2Q3LHN2 52 aa8.83□□□□□ -1
LPCAT1-203ENST00000503252 MUC2Q02817 5179 aa8.78□□□□□ -1
LPCAT1-203ENST00000503252 HERC1Q15751 4861 aa8.76□□□□□ -1.01
LPCAT1-203ENST00000503252 PCLOQ9Y6V0 5065 aa8.74□□□□□ -1.01
LPCAT1-203ENST00000503252 LORP23490 312 aaPredicted RBP8.72□□□□□ -1.01
LPCAT1-203ENST00000503252 R4GN34 69 aa8.72□□□□□ -1.01
LPCAT1-203ENST00000503252 HMCN2Q8NDA2 5059 aa8.66□□□□□ -1.02
LPCAT1-203ENST00000503252 FLGP20930 4061 aaPredicted RBP8.62□□□□□ -1.03
LPCAT1-203ENST00000503252 PLAC4Q8WY50 150 aa8.57□□□□□ -1.04
LPCAT1-203ENST00000503252 LCE2CQ5TA81 110 aa8.4□□□□□ -1.07
LPCAT1-203ENST00000503252 FAT4Q6V0I7 4981 aa8.37□□□□□ -1.07
LPCAT1-203ENST00000503252 CAMK2N1Q7Z7J9 78 aa8.29□□□□□ -1.08
LPCAT1-203ENST00000503252 RNF213Q63HN8 5207 aa8.27□□□□□ -1.09
LPCAT1-203ENST00000503252 UBR4Q5T4S7 5183 aa8.26□□□□□ -1.09
LPCAT1-203ENST00000503252 MT1HP80294 61 aa8.18□□□□□ -1.1
LPCAT1-203ENST00000503252 M0R2T5 61 aa8.17□□□□□ -1.1
LPCAT1-203ENST00000503252 PRO2289Q9P1D8 64 aa8.06□□□□□ -1.12
LPCAT1-203ENST00000503252 SPRR2GQ9BYE4 73 aa8.06□□□□□ -1.12
LPCAT1-203ENST00000503252 KRTAP19-1Q8IUB9 90 aa8.06□□□□□ -1.12
LPCAT1-203ENST00000503252 MT2AP02795 61 aa7.99□□□□□ -1.13
LPCAT1-203ENST00000503252 MT1FP04733 61 aa7.99□□□□□ -1.13
LPCAT1-203ENST00000503252 KRTAP10-10P60014 251 aa7.96□□□□□ -1.13
LPCAT1-203ENST00000503252 KRTAP9-8Q9BYQ0 159 aa7.96□□□□□ -1.13
LPCAT1-203ENST00000503252 PP632Q6XCG6 107 aa7.91□□□□□ -1.14
LPCAT1-203ENST00000503252 TNP1P09430 55 aa7.9□□□□□ -1.15
LPCAT1-203ENST00000503252 KRTAP19-8Q3LI54 63 aa7.74□□□□□ -1.17
LPCAT1-203ENST00000503252 SPRR5A0A1B0GTR4 108 aa7.72□□□□□ -1.17
LPCAT1-203ENST00000503252 KRTAP23-1A1A580 65 aa7.72□□□□□ -1.17
LPCAT1-203ENST00000503252 MT1BP07438 61 aa7.67□□□□□ -1.18
LPCAT1-203ENST00000503252 INE1O15225 51 aa7.65□□□□□ -1.18
LPCAT1-203ENST00000503252 KRTAP9-3Q9BYQ3 159 aa7.64□□□□□ -1.19
LPCAT1-203ENST00000503252 KRTAP10-5P60370 271 aa7.57□□□□□ -1.2
LPCAT1-203ENST00000503252 MT1XP80297 61 aa7.56□□□□□ -1.2
LPCAT1-203ENST00000503252 LCE3AQ5TA76 89 aa7.55□□□□□ -1.2
LPCAT1-203ENST00000503252 LCE2AQ5TA79 106 aaPredicted RBP7.39□□□□□ -1.23
LPCAT1-203ENST00000503252 LCE2BO14633 110 aa7.38□□□□□ -1.23
LPCAT1-203ENST00000503252 KRTAP10-7P60409 375 aaPredicted RBP7.34□□□□□ -1.23
LPCAT1-203ENST00000503252 KRTAP8-1Q8IUC2 63 aa7.34□□□□□ -1.24
LPCAT1-203ENST00000503252 KRTAP10-12P60413 245 aa7.33□□□□□ -1.24
LPCAT1-203ENST00000503252 USH2AO75445 5202 aa7.24□□□□□ -1.25
LPCAT1-203ENST00000503252 KRTAP12-3P60328 96 aa7.19□□□□□ -1.26
LPCAT1-203ENST00000503252 KMT2DO14686 5537 aa7.02□□□□□ -1.29
LPCAT1-203ENST00000503252 KRTAP19-5Q3LI72 72 aa6.99□□□□□ -1.29
LPCAT1-203ENST00000503252 KRTAP4-8A0A0G2JLE6 195 aa6.95□□□□□ -1.3
LPCAT1-203ENST00000503252 KRTAP4-8Q9BYQ9 185 aa6.95□□□□□ -1.3
LPCAT1-203ENST00000503252 SSPOA2VEC9 5147 aa6.84□□□□□ -1.31
LPCAT1-203ENST00000503252 LCE3CQ5T5A8 94 aa6.75□□□□□ -1.33
LPCAT1-203ENST00000503252 KRTAP19-7Q3SYF9 63 aa6.74□□□□□ -1.33
LPCAT1-203ENST00000503252 FSIP2Q5CZC0 6907 aa6.72□□□□□ -1.33
LPCAT1-203ENST00000503252 KRTAP19-6Q3LI70 58 aa6.67□□□□□ -1.34
LPCAT1-203ENST00000503252 MT1EP04732 61 aa6.56□□□□□ -1.36
LPCAT1-203ENST00000503252 KRTAP4-7Q9BYR0 210 aa6.55□□□□□ -1.36
LPCAT1-203ENST00000503252 KRTAP9-6A8MVA2 160 aa6.52□□□□□ -1.37
LPCAT1-203ENST00000503252 MT1LQ93083 61 aa6.52□□□□□ -1.37
LPCAT1-203ENST00000503252 LCE2DQ5TA82 110 aaPredicted RBP6.41□□□□□ -1.38
LPCAT1-203ENST00000503252 FCGBPQ9Y6R7 5405 aaPredicted RBP6.39□□□□□ -1.39
LPCAT1-203ENST00000503252 KRTAP19-4Q3LI73 84 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms