RNA–Protein interactions for RNA: ENST00000497964.1

MACF1-226, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 4,160 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-226ENST00000497964 TNP1P09430 55 aa3.52□□□□□ -1.85
MACF1-226ENST00000497964 DNAH8Q96JB1 4490 aa3.5□□□□□ -1.85
MACF1-226ENST00000497964 STARD9Q9P2P6 4700 aa3.49□□□□□ -1.85
MACF1-226ENST00000497964 DNAH5Q8TE73 4624 aa3.47□□□□□ -1.85
MACF1-226ENST00000497964 LRP1BQ9NZR2 4599 aa3.47□□□□□ -1.85
MACF1-226ENST00000497964 PP632Q6XCG6 107 aa3.47□□□□□ -1.85
MACF1-226ENST00000497964 KMT2AQ03164 3969 aa3.46□□□□□ -1.86
MACF1-226ENST00000497964 FRAS1Q86XX4 4008 aa3.46□□□□□ -1.86
MACF1-226ENST00000497964 FAT1Q14517 4588 aa3.45□□□□□ -1.86
MACF1-226ENST00000497964 KRTAP21-3Q3LHN1 58 aa3.44□□□□□ -1.86
MACF1-226ENST00000497964 DNHD1Q96M86 4753 aa3.43□□□□□ -1.86
MACF1-226ENST00000497964 VPS13DQ5THJ4 4388 aa3.43□□□□□ -1.86
MACF1-226ENST00000497964 KRTAP10-4P60372 401 aaPredicted RBP3.42□□□□□ -1.86
MACF1-226ENST00000497964 KRTAP23-1A1A580 65 aa3.42□□□□□ -1.86
MACF1-226ENST00000497964 KRTAP15-1Q3LI76 137 aa3.42□□□□□ -1.86
MACF1-226ENST00000497964 DNAH17Q9UFH2 4485 aa3.41□□□□□ -1.86
MACF1-226ENST00000497964 PRKDCP78527 4128 aaKnown RBP3.41□□□□□ -1.86
MACF1-226ENST00000497964 DNAH2Q9P225 4427 aa3.4□□□□□ -1.86
MACF1-226ENST00000497964 DNAH7Q8WXX0 4024 aa3.39□□□□□ -1.87
MACF1-226ENST00000497964 MYCBP2O75592 4640 aa3.38□□□□□ -1.87
MACF1-226ENST00000497964 CMYA5Q8N3K9 4069 aa3.35□□□□□ -1.87
MACF1-226ENST00000497964 MT1HL1P0DM35 61 aa3.35□□□□□ -1.87
MACF1-226ENST00000497964 VPS13BQ7Z7G8 4022 aa3.35□□□□□ -1.87
MACF1-226ENST00000497964 ALMS1Q8TCU4 4167 aa3.35□□□□□ -1.87
MACF1-226ENST00000497964 DNAH6Q9C0G6 4158 aa3.34□□□□□ -1.87
MACF1-226ENST00000497964 DNAH3Q8TD57 4116 aa3.34□□□□□ -1.88
MACF1-226ENST00000497964 DYNC1H1Q14204 4646 aaKnown RBP3.31□□□□□ -1.88
MACF1-226ENST00000497964 HECTD4Q9Y4D8 3996 aa3.31□□□□□ -1.88
MACF1-226ENST00000497964 KRTAP10-10P60014 251 aa3.3□□□□□ -1.88
MACF1-226ENST00000497964 FAT3Q8TDW7 4589 aa3.25□□□□□ -1.89
MACF1-226ENST00000497964 APOBP04114 4563 aaKnown RBP3.25□□□□□ -1.89
MACF1-226ENST00000497964 LRP1Q07954 4544 aaKnown RBP3.24□□□□□ -1.89
MACF1-226ENST00000497964 SACSQ9NZJ4 4579 aa3.24□□□□□ -1.89
MACF1-226ENST00000497964 KRTAP4-5Q9BYR2 181 aa3.23□□□□□ -1.89
MACF1-226ENST00000497964 DYNC2H1Q8NCM8 4307 aaKnown RBP3.23□□□□□ -1.89
MACF1-226ENST00000497964 RYR1P21817 5038 aa3.2□□□□□ -1.9
MACF1-226ENST00000497964 PKHD1P08F94 4074 aa3.19□□□□□ -1.9
MACF1-226ENST00000497964 KIAA1109Q2LD37 5005 aa3.17□□□□□ -1.9
MACF1-226ENST00000497964 HYDINQ4G0P3 5121 aa3.16□□□□□ -1.9
MACF1-226ENST00000497964 FAT2Q9NYQ8 4349 aa3.16□□□□□ -1.9
MACF1-226ENST00000497964 LRP2P98164 4655 aa3.13□□□□□ -1.91
MACF1-226ENST00000497964 KRTAP4-1Q9BYQ7 146 aa3.11□□□□□ -1.91
MACF1-226ENST00000497964 PRO2289Q9P1D8 64 aa3.09□□□□□ -1.92
MACF1-226ENST00000497964 RYR3Q15413 4870 aa3.08□□□□□ -1.92
MACF1-226ENST00000497964 LCE3AQ5TA76 89 aa3.05□□□□□ -1.92
MACF1-226ENST00000497964 KRTAP17-1Q9BYP8 105 aa3.05□□□□□ -1.92
MACF1-226ENST00000497964 HSPG2P98160 4391 aa3.03□□□□□ -1.93
MACF1-226ENST00000497964 KMT2CQ8NEZ4 4911 aaKnown RBP3.01□□□□□ -1.93
MACF1-226ENST00000497964 PKD1P98161 4303 aa3.01□□□□□ -1.93
MACF1-226ENST00000497964 KRTAP10-12P60413 245 aa2.99□□□□□ -1.93
MACF1-226ENST00000497964 KRTAP12-3P60328 96 aa2.98□□□□□ -1.93
MACF1-226ENST00000497964 LPAP08519 4548 aa2.96□□□□□ -1.94
MACF1-226ENST00000497964 INE1O15225 51 aa2.95□□□□□ -1.94
MACF1-226ENST00000497964 RYR2Q92736 4967 aa2.93□□□□□ -1.94
MACF1-226ENST00000497964 LOC100996750A0A140TA64 210 aa2.88□□□□□ -1.95
MACF1-226ENST00000497964 KRTAP4-6Q9BYQ5 205 aa2.88□□□□□ -1.95
MACF1-226ENST00000497964 HERC2O95714 4834 aa2.87□□□□□ -1.95
MACF1-226ENST00000497964 PKHD1L1Q86WI1 4243 aa2.87□□□□□ -1.95
MACF1-226ENST00000497964 SPRR2GQ9BYE4 73 aa2.87□□□□□ -1.95
MACF1-226ENST00000497964 MT2AP02795 61 aa2.84□□□□□ -1.95
MACF1-226ENST00000497964 TNXBP22105 4242 aa2.84□□□□□ -1.95
MACF1-226ENST00000497964 MT1HP80294 61 aa2.84□□□□□ -1.96
MACF1-226ENST00000497964 MT1FP04733 61 aa2.83□□□□□ -1.96
MACF1-226ENST00000497964 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
MACF1-226ENST00000497964 KRTAP19-1Q8IUB9 90 aa2.82□□□□□ -1.96
MACF1-226ENST00000497964 EPPK1P58107 5090 aaKnown RBP2.82□□□□□ -1.96
MACF1-226ENST00000497964 CRCT1Q9UGL9 99 aa2.81□□□□□ -1.96
MACF1-226ENST00000497964 KRTAP8-1Q8IUC2 63 aa2.79□□□□□ -1.96
MACF1-226ENST00000497964 MUC2Q02817 5179 aa2.78□□□□□ -1.96
MACF1-226ENST00000497964 ABCA13Q86UQ4 5058 aa2.76□□□□□ -1.97
MACF1-226ENST00000497964 SPRR5A0A1B0GTR4 108 aa2.75□□□□□ -1.97
MACF1-226ENST00000497964 KRTAP9-9Q9BYP9 154 aa2.75□□□□□ -1.97
MACF1-226ENST00000497964 KRTAP9-4Q9BYQ2 154 aa2.75□□□□□ -1.97
MACF1-226ENST00000497964 KRTAP4-8Q9BYQ9 185 aa2.74□□□□□ -1.97
MACF1-226ENST00000497964 MUC17Q685J3 4493 aa2.73□□□□□ -1.97
MACF1-226ENST00000497964 KRTAP19-2Q3LHN2 52 aa2.73□□□□□ -1.97
MACF1-226ENST00000497964 KRTAP10-7P60409 375 aaPredicted RBP2.72□□□□□ -1.97
MACF1-226ENST00000497964 KRTAP19-5Q3LI72 72 aa2.72□□□□□ -1.97
MACF1-226ENST00000497964 FAT4Q6V0I7 4981 aa2.69□□□□□ -1.98
MACF1-226ENST00000497964 MT1XP80297 61 aa2.69□□□□□ -1.98
MACF1-226ENST00000497964 FLGP20930 4061 aaPredicted RBP2.68□□□□□ -1.98
MACF1-226ENST00000497964 KRTAP10-5P60370 271 aa2.68□□□□□ -1.98
MACF1-226ENST00000497964 LCE3CQ5T5A8 94 aa2.68□□□□□ -1.98
MACF1-226ENST00000497964 PCLOQ9Y6V0 5065 aa2.67□□□□□ -1.98
MACF1-226ENST00000497964 KRTAP19-8Q3LI54 63 aa2.67□□□□□ -1.98
MACF1-226ENST00000497964 MT1BP07438 61 aa2.67□□□□□ -1.98
MACF1-226ENST00000497964 KRTAP9-8Q9BYQ0 159 aa2.66□□□□□ -1.98
MACF1-226ENST00000497964 RNF213Q63HN8 5207 aa2.65□□□□□ -1.99
MACF1-226ENST00000497964 KRTAP9-6A0A140TA67 174 aa2.64□□□□□ -1.99
MACF1-226ENST00000497964 KRTAP9-7A8MTY7 169 aa2.64□□□□□ -1.99
MACF1-226ENST00000497964 HERC1Q15751 4861 aa2.64□□□□□ -1.99
MACF1-226ENST00000497964 UBR4Q5T4S7 5183 aa2.64□□□□□ -1.99
MACF1-226ENST00000497964 KRTAP19-4Q3LI73 84 aa2.64□□□□□ -1.99
MACF1-226ENST00000497964 KRTAP9-2Q9BYQ4 174 aa2.63□□□□□ -1.99
MACF1-226ENST00000497964 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.63□□□□□ -1.99
MACF1-226ENST00000497964 KRTAP9-3Q9BYQ3 159 aa2.62□□□□□ -1.99
MACF1-226ENST00000497964 KRTAP4-8A0A0G2JLE6 195 aa2.61□□□□□ -1.99
MACF1-226ENST00000497964 HMCN2Q8NDA2 5059 aa2.59□□□□□ -1.99
MACF1-226ENST00000497964 FSIP2Q5CZC0 6907 aa2.59□□□□□ -2
MACF1-226ENST00000497964 BIRC6Q9NR09 4857 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms