RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 PRO1854Q9UHT4 67 aa0.68□□□□□ -2.3
CKS1BP2-201ENST00000497342 V9GYH0 126 aa0.68□□□□□ -2.3
CKS1BP2-201ENST00000497342 SFT2D2O95562 160 aa0.67□□□□□ -2.3
CKS1BP2-201ENST00000497342 PPP1R17O96001 155 aa0.67□□□□□ -2.3
CKS1BP2-201ENST00000497342 COX6CP09669 75 aa0.67□□□□□ -2.3
CKS1BP2-201ENST00000497342 GNG11P61952 73 aa0.67□□□□□ -2.3
CKS1BP2-201ENST00000497342 SPAG11BQ08648 103 aa0.67□□□□□ -2.3
CKS1BP2-201ENST00000497342 C9orf62Q8N4C0 152 aa0.67□□□□□ -2.3
CKS1BP2-201ENST00000497342 SERP2Q8N6R1 65 aa0.67□□□□□ -2.3
CKS1BP2-201ENST00000497342 C10orf95Q9H7T3 257 aa0.67□□□□□ -2.3
CKS1BP2-201ENST00000497342 NPVFQ9HCQ7 196 aa0.67□□□□□ -2.3
CKS1BP2-201ENST00000497342 MUC19Q7Z5P9 8384 aa0.66□□□□□ -2.3
CKS1BP2-201ENST00000497342 ATOX1O00244 68 aa0.66□□□□□ -2.3
CKS1BP2-201ENST00000497342 UQCR11O14957 56 aa0.66□□□□□ -2.3
CKS1BP2-201ENST00000497342 NMBP08949 121 aa0.66□□□□□ -2.3
CKS1BP2-201ENST00000497342 SNCAP37840 140 aa0.66□□□□□ -2.3
CKS1BP2-201ENST00000497342 A0A0D9SG42 100 aa0.65□□□□□ -2.31
CKS1BP2-201ENST00000497342 F8VRH5 84 aa0.65□□□□□ -2.31
CKS1BP2-201ENST00000497342 MT1GP13640 62 aa0.65□□□□□ -2.31
CKS1BP2-201ENST00000497342 SMIM11AP58511 58 aa0.65□□□□□ -2.31
CKS1BP2-201ENST00000497342 SEC11AP67812 179 aa0.65□□□□□ -2.31
CKS1BP2-201ENST00000497342 Q6ZRX8 168 aa0.65□□□□□ -2.31
CKS1BP2-201ENST00000497342 VAMP8Q9BV40 100 aa0.65□□□□□ -2.31
CKS1BP2-201ENST00000497342 UQCR10Q9UDW1 63 aa0.65□□□□□ -2.31
CKS1BP2-201ENST00000497342 CACFD1Q9UGQ2 172 aa0.65□□□□□ -2.31
CKS1BP2-201ENST00000497342 TRBV25-1A0A075B6N4 114 aa0.64□□□□□ -2.31
CKS1BP2-201ENST00000497342 SNRPGP15A8MWD9 76 aa0.64□□□□□ -2.31
CKS1BP2-201ENST00000497342 CHKB-CPT1BH3BT56 60 aa0.64□□□□□ -2.31
CKS1BP2-201ENST00000497342 GNGT2O14610 69 aa0.64□□□□□ -2.31
CKS1BP2-201ENST00000497342 COX17Q14061 63 aa0.64□□□□□ -2.31
CKS1BP2-201ENST00000497342 PYY3Q5JQD4 70 aa0.64□□□□□ -2.31
CKS1BP2-201ENST00000497342 NXT2Q9NPJ8 142 aaKnown RBP0.64□□□□□ -2.31
CKS1BP2-201ENST00000497342 TRAV1-2A0A0B4J238 106 aa0.63□□□□□ -2.31
CKS1BP2-201ENST00000497342 SYS1-DBNDD2H3BUS1 97 aa0.63□□□□□ -2.31
CKS1BP2-201ENST00000497342 MT1EP04732 61 aa0.63□□□□□ -2.31
CKS1BP2-201ENST00000497342 ACYP2P14621 99 aa0.63□□□□□ -2.31
CKS1BP2-201ENST00000497342 KRTAP19-7Q3SYF9 63 aa0.63□□□□□ -2.31
CKS1BP2-201ENST00000497342 SSBP3-AS1Q7Z2R9 100 aa0.63□□□□□ -2.31
CKS1BP2-201ENST00000497342 BAGE2Q86Y30 109 aa0.63□□□□□ -2.31
CKS1BP2-201ENST00000497342 MT1MQ8N339 61 aa0.63□□□□□ -2.31
CKS1BP2-201ENST00000497342 SMIM4Q8WVI0 70 aa0.63□□□□□ -2.31
CKS1BP2-201ENST00000497342 PMCHL2Q9BQD1 86 aa0.63□□□□□ -2.31
CKS1BP2-201ENST00000497342 H0YAA0 97 aa0.62□□□□□ -2.31
CKS1BP2-201ENST00000497342 TMEM170BQ5T4T1 132 aa0.62□□□□□ -2.31
CKS1BP2-201ENST00000497342 F2Z2F3 143 aa0.61□□□□□ -2.31
CKS1BP2-201ENST00000497342 CFDP00746 253 aaPredicted RBP0.61□□□□□ -2.31
CKS1BP2-201ENST00000497342 APOC3P02656 99 aa0.61□□□□□ -2.31
CKS1BP2-201ENST00000497342 PRLHP81277 87 aa0.61□□□□□ -2.31
CKS1BP2-201ENST00000497342 MANBALQ9NQG1 85 aa0.61□□□□□ -2.31
CKS1BP2-201ENST00000497342 A0A0G2JND7 137 aa0.6□□□□□ -2.31
CKS1BP2-201ENST00000497342 MGPP08493 103 aa0.6□□□□□ -2.31
CKS1BP2-201ENST00000497342 C20orf78Q9BR46 151 aa0.6□□□□□ -2.31
CKS1BP2-201ENST00000497342 PRR15LQ9BU68 103 aa0.6□□□□□ -2.31
CKS1BP2-201ENST00000497342 TRBV6-1A0A0K0K1D8 114 aa0.59□□□□□ -2.31
CKS1BP2-201ENST00000497342 K7EP34 96 aa0.59□□□□□ -2.31
CKS1BP2-201ENST00000497342 M0R3E3 92 aa0.59□□□□□ -2.31
CKS1BP2-201ENST00000497342 KRTAP21-2Q3LI59 83 aa0.59□□□□□ -2.31
CKS1BP2-201ENST00000497342 CTXND1A0A1B0GTU2 59 aa0.58□□□□□ -2.32
CKS1BP2-201ENST00000497342 IGLC2P0DOY2 106 aa0.58□□□□□ -2.32
CKS1BP2-201ENST00000497342 SPATA8Q6RVD6 105 aa0.58□□□□□ -2.32
CKS1BP2-201ENST00000497342 C6orf48Q9UBA6 75 aa0.58□□□□□ -2.32
CKS1BP2-201ENST00000497342 ARL2-SNX15V9GYD0 113 aa0.58□□□□□ -2.32
CKS1BP2-201ENST00000497342 LINC00959A0A1B0GUT2 108 aa0.57□□□□□ -2.32
CKS1BP2-201ENST00000497342 GCHFRP30047 84 aa0.57□□□□□ -2.32
CKS1BP2-201ENST00000497342 PMCHL1Q16048 86 aa0.57□□□□□ -2.32
CKS1BP2-201ENST00000497342 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
CKS1BP2-201ENST00000497342 NMSQ5H8A3 153 aa0.57□□□□□ -2.32
CKS1BP2-201ENST00000497342 Q9H521 79 aa0.57□□□□□ -2.32
CKS1BP2-201ENST00000497342 HIGD1BQ9P298 99 aa0.57□□□□□ -2.32
CKS1BP2-201ENST00000497342 TRAV21A0A0B4J279 112 aa0.56□□□□□ -2.32
CKS1BP2-201ENST00000497342 NDUFA1O15239 70 aa0.56□□□□□ -2.32
CKS1BP2-201ENST00000497342 ALKAL2Q6UX46 152 aa0.56□□□□□ -2.32
CKS1BP2-201ENST00000497342 ARMS2P0C7Q2 107 aa0.54□□□□□ -2.32
CKS1BP2-201ENST00000497342 FAUP35544 74 aaKnown RBP0.54□□□□□ -2.32
CKS1BP2-201ENST00000497342 C10orf113Q5VZT2 155 aa0.54□□□□□ -2.32
CKS1BP2-201ENST00000497342 CNFNQ9BYD5 112 aa0.54□□□□□ -2.32
CKS1BP2-201ENST00000497342 C7orf77A4D0Y5 90 aa0.53□□□□□ -2.32
CKS1BP2-201ENST00000497342 CEBPZOSA8MTT3 80 aa0.53□□□□□ -2.32
CKS1BP2-201ENST00000497342 KRTAP6-2Q3LI66 62 aa0.53□□□□□ -2.32
CKS1BP2-201ENST00000497342 Q6JHZ5 121 aa0.53□□□□□ -2.32
CKS1BP2-201ENST00000497342 MT1LQ93083 61 aa0.53□□□□□ -2.32
CKS1BP2-201ENST00000497342 PRO1933Q9H354 126 aa0.53□□□□□ -2.32
CKS1BP2-201ENST00000497342 ZNF815PA8K554 130 aa0.52□□□□□ -2.33
CKS1BP2-201ENST00000497342 S100A16Q96FQ6 103 aaKnown RBP0.52□□□□□ -2.33
CKS1BP2-201ENST00000497342 F8WEM9 126 aa0.51□□□□□ -2.33
CKS1BP2-201ENST00000497342 ETDBQ3ZM63 59 aa0.51□□□□□ -2.33
CKS1BP2-201ENST00000497342 SFTA2Q6UW10 78 aa0.51□□□□□ -2.33
CKS1BP2-201ENST00000497342 PSENENQ9NZ42 101 aa0.51□□□□□ -2.33
CKS1BP2-201ENST00000497342 CRIPTQ9P021 101 aa0.51□□□□□ -2.33
CKS1BP2-201ENST00000497342 A0A087WVE0 104 aa0.5□□□□□ -2.33
CKS1BP2-201ENST00000497342 ACYP1P07311 99 aa0.5□□□□□ -2.33
CKS1BP2-201ENST00000497342 SPINK7P58062 85 aa0.5□□□□□ -2.33
CKS1BP2-201ENST00000497342 H1FX-AS1Q4G0G2 97 aa0.5□□□□□ -2.33
CKS1BP2-201ENST00000497342 LINC00643Q86TS7 51 aa0.5□□□□□ -2.33
CKS1BP2-201ENST00000497342 H0Y9P7 68 aa0.49□□□□□ -2.33
CKS1BP2-201ENST00000497342 H3BVH4 76 aa0.49□□□□□ -2.33
CKS1BP2-201ENST00000497342 M0QY20 66 aa0.49□□□□□ -2.33
CKS1BP2-201ENST00000497342 FXYD6Q9H0Q3 95 aa0.49□□□□□ -2.33
CKS1BP2-201ENST00000497342 IGLC3P0DOY3 106 aa0.48□□□□□ -2.33
CKS1BP2-201ENST00000497342 PEA15Q15121 130 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms