RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 USH2AO75445 5202 aa1.15□□□□□ -2.22
SNX13-211ENST00000496855 LRP1BQ9NZR2 4599 aa1.15□□□□□ -2.23
SNX13-211ENST00000496855 S100ZQ8WXG8 99 aa1.15□□□□□ -2.23
SNX13-211ENST00000496855 LRP1Q07954 4544 aaKnown RBP1.14□□□□□ -2.23
SNX13-211ENST00000496855 VPS13BQ7Z7G8 4022 aa1.14□□□□□ -2.23
SNX13-211ENST00000496855 DNAH2Q9P225 4427 aa1.14□□□□□ -2.23
SNX13-211ENST00000496855 DNAH5Q8TE73 4624 aa1.14□□□□□ -2.23
SNX13-211ENST00000496855 ATXN8Q156A1 80 aa1.13□□□□□ -2.23
SNX13-211ENST00000496855 NDUFA4O00483 81 aa1.12□□□□□ -2.23
SNX13-211ENST00000496855 SFTA3P0C7M3 94 aa1.12□□□□□ -2.23
SNX13-211ENST00000496855 GNG13Q9P2W3 67 aa1.12□□□□□ -2.23
SNX13-211ENST00000496855 MUC12Q9UKN1 5478 aa1.12□□□□□ -2.23
SNX13-211ENST00000496855 SPRR1AP35321 89 aa1.12□□□□□ -2.23
SNX13-211ENST00000496855 ENHOQ6UWT2 76 aa1.12□□□□□ -2.23
SNX13-211ENST00000496855 MRPL34Q9BQ48 92 aaKnown RBP1.12□□□□□ -2.23
SNX13-211ENST00000496855 KRTAP2-3P0C7H8 128 aa1.11□□□□□ -2.23
SNX13-211ENST00000496855 KRTAP2-4Q9BYR9 128 aa1.11□□□□□ -2.23
SNX13-211ENST00000496855 AHNAKQ09666 5890 aaKnown RBP1.1□□□□□ -2.23
SNX13-211ENST00000496855 I3L3M4 83 aa1.1□□□□□ -2.23
SNX13-211ENST00000496855 USMG5Q96IX5 58 aa1.1□□□□□ -2.23
SNX13-211ENST00000496855 DNAH17Q9UFH2 4485 aa1.1□□□□□ -2.23
SNX13-211ENST00000496855 TFF3Q07654 80 aa1.09□□□□□ -2.24
SNX13-211ENST00000496855 KRTAP5-10Q6L8G5 202 aa1.09□□□□□ -2.24
SNX13-211ENST00000496855 U3KQA8 63 aa1.09□□□□□ -2.24
SNX13-211ENST00000496855 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
SNX13-211ENST00000496855 Q5VSD8 79 aa1.08□□□□□ -2.24
SNX13-211ENST00000496855 SPRR1BP22528 89 aa1.07□□□□□ -2.24
SNX13-211ENST00000496855 KRTAP19-3Q7Z4W3 81 aa1.07□□□□□ -2.24
SNX13-211ENST00000496855 STATHP02808 62 aa1.06□□□□□ -2.24
SNX13-211ENST00000496855 LINC01549A6NIU2 74 aa1.05□□□□□ -2.24
SNX13-211ENST00000496855 RPL38P63173 70 aaKnown RBP1.05□□□□□ -2.24
SNX13-211ENST00000496855 KRTAP2-1Q9BYU5 128 aa1.05□□□□□ -2.24
SNX13-211ENST00000496855 TNCP24821 2201 aa1.05□□□□□ -2.24
SNX13-211ENST00000496855 TNXBP22105 4242 aa1.04□□□□□ -2.24
SNX13-211ENST00000496855 APLNQ9ULZ1 77 aa1.04□□□□□ -2.24
SNX13-211ENST00000496855 LPAP08519 4548 aa1.03□□□□□ -2.24
SNX13-211ENST00000496855 NDUFA3O95167 84 aa1.02□□□□□ -2.25
SNX13-211ENST00000496855 H1FX-AS1Q4G0G2 97 aa1.02□□□□□ -2.25
SNX13-211ENST00000496855 KLK9Q2XQG4 91 aa1.01□□□□□ -2.25
SNX13-211ENST00000496855 DEFB105AQ8NG35 78 aa1.01□□□□□ -2.25
SNX13-211ENST00000496855 KCNQ1DNQ9H478 68 aa1.01□□□□□ -2.25
SNX13-211ENST00000496855 MDN1Q9NU22 5596 aa1.01□□□□□ -2.25
SNX13-211ENST00000496855 DEFB133Q30KQ1 61 aa1□□□□□ -2.25
SNX13-211ENST00000496855 DSTQ03001 7570 aaKnown RBP0.99□□□□□ -2.25
SNX13-211ENST00000496855 CCL22O00626 93 aa0.97□□□□□ -2.25
SNX13-211ENST00000496855 CRIP1P50238 77 aa0.97□□□□□ -2.25
SNX13-211ENST00000496855 UBL5Q9BZL1 73 aa0.97□□□□□ -2.25
SNX13-211ENST00000496855 K7EMI3 77 aa0.96□□□□□ -2.26
SNX13-211ENST00000496855 PRH1P02810 166 aa0.95□□□□□ -2.26
SNX13-211ENST00000496855 COX6B2Q6YFQ2 88 aa0.95□□□□□ -2.26
SNX13-211ENST00000496855 H0YAA0 97 aa0.94□□□□□ -2.26
SNX13-211ENST00000496855 MUC5ACP98088 5654 aa0.94□□□□□ -2.26
SNX13-211ENST00000496855 DNAH8Q96JB1 4490 aa0.94□□□□□ -2.26
SNX13-211ENST00000496855 DEFB131BA0A096LNP1 70 aa0.93□□□□□ -2.26
SNX13-211ENST00000496855 SMR3BP02814 79 aaPredicted RBP0.93□□□□□ -2.26
SNX13-211ENST00000496855 MUC17Q685J3 4493 aa0.93□□□□□ -2.26
SNX13-211ENST00000496855 ETDCA0A1B0GVM5 59 aa0.92□□□□□ -2.26
SNX13-211ENST00000496855 DEFB108AA8MXU0 73 aa0.92□□□□□ -2.26
SNX13-211ENST00000496855 FXYD6Q9H0Q3 95 aa0.92□□□□□ -2.26
SNX13-211ENST00000496855 CDKN2A-AS1Q9UH64 79 aa0.92□□□□□ -2.26
SNX13-211ENST00000496855 WFDC13Q8IUB5 93 aa0.92□□□□□ -2.26
SNX13-211ENST00000496855 DEFB104AQ8WTQ1 72 aa0.91□□□□□ -2.26
SNX13-211ENST00000496855 DEFB114Q30KQ6 69 aa0.9□□□□□ -2.27
SNX13-211ENST00000496855 SPINK6Q6UWN8 80 aa0.89□□□□□ -2.27
SNX13-211ENST00000496855 MT1HL1P0DM35 61 aa0.88□□□□□ -2.27
SNX13-211ENST00000496855 LINC00158P58513 81 aa0.88□□□□□ -2.27
SNX13-211ENST00000496855 LYNX1G3V0Z9 82 aa0.87□□□□□ -2.27
SNX13-211ENST00000496855 KRTAP19-6Q3LI70 58 aa0.87□□□□□ -2.27
SNX13-211ENST00000496855 FCER1GP30273 86 aa0.86□□□□□ -2.27
SNX13-211ENST00000496855 M0R1W7 72 aa0.85□□□□□ -2.27
SNX13-211ENST00000496855 SPRR2EP22531 72 aa0.85□□□□□ -2.27
SNX13-211ENST00000496855 SPRR2BP35325 72 aa0.85□□□□□ -2.27
SNX13-211ENST00000496855 SPRR2AP35326 72 aa0.85□□□□□ -2.27
SNX13-211ENST00000496855 MRPL33O75394 65 aaKnown RBP0.84□□□□□ -2.28
SNX13-211ENST00000496855 SPRR2DP22532 72 aa0.83□□□□□ -2.28
SNX13-211ENST00000496855 IGIPA6NJ69 53 aa0.82□□□□□ -2.28
SNX13-211ENST00000496855 SPINK4O60575 86 aa0.82□□□□□ -2.28
SNX13-211ENST00000496855 FLGP20930 4061 aaPredicted RBP0.81□□□□□ -2.28
SNX13-211ENST00000496855 MT1HP80294 61 aa0.8□□□□□ -2.28
SNX13-211ENST00000496855 DEFB130BP0DP73 79 aa0.79□□□□□ -2.28
SNX13-211ENST00000496855 DEFB130AP0DP74 79 aa0.79□□□□□ -2.28
SNX13-211ENST00000496855 SYNE1Q8NF91 8797 aaKnown RBP0.78□□□□□ -2.28
SNX13-211ENST00000496855 MT4P47944 62 aa0.77□□□□□ -2.29
SNX13-211ENST00000496855 NCBP2-AS2Q69YL0 99 aa0.77□□□□□ -2.29
SNX13-211ENST00000496855 M0R2T5 61 aa0.75□□□□□ -2.29
SNX13-211ENST00000496855 SPINK1P00995 79 aa0.75□□□□□ -2.29
SNX13-211ENST00000496855 IAPPP10997 89 aa0.75□□□□□ -2.29
SNX13-211ENST00000496855 NMES1Q9C002 83 aa0.75□□□□□ -2.29
SNX13-211ENST00000496855 DEFB108BQ8NET1 73 aa0.74□□□□□ -2.29
SNX13-211ENST00000496855 SPRR2FQ96RM1 72 aa0.73□□□□□ -2.29
SNX13-211ENST00000496855 PRM1P04553 51 aa0.72□□□□□ -2.29
SNX13-211ENST00000496855 KRTAP19-2Q3LHN2 52 aa0.71□□□□□ -2.3
SNX13-211ENST00000496855 DEFB110Q30KQ9 67 aa0.7□□□□□ -2.3
SNX13-211ENST00000496855 KRTAP21-1Q3LI58 79 aa0.7□□□□□ -2.3
SNX13-211ENST00000496855 H3BSH0 61 aa0.69□□□□□ -2.3
SNX13-211ENST00000496855 RPS27P42677 84 aaKnown RBP0.69□□□□□ -2.3
SNX13-211ENST00000496855 MINOS1Q5TGZ0 78 aa0.69□□□□□ -2.3
SNX13-211ENST00000496855 RPS27LQ71UM5 84 aaKnown RBP0.69□□□□□ -2.3
SNX13-211ENST00000496855 SERF2P84101 59 aa0.68□□□□□ -2.3
SNX13-211ENST00000496855 SNRPGP15A8MWD9 76 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms