RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 MT1BP07438 61 aa5.84□□□□□ -1.47
FN1-226ENST00000496542 Q5VV11 94 aa5.84□□□□□ -1.47
FN1-226ENST00000496542 TP53AIP1Q9HCN2 124 aa5.84□□□□□ -1.47
FN1-226ENST00000496542 SPRR2GQ9BYE4 73 aa5.81□□□□□ -1.48
FN1-226ENST00000496542 KRTAP19-8Q3LI54 63 aa5.8□□□□□ -1.48
FN1-226ENST00000496542 KLKP1Q107X0 134 aa5.77□□□□□ -1.49
FN1-226ENST00000496542 GTF2H5Q6ZYL4 71 aa5.76□□□□□ -1.49
FN1-226ENST00000496542 NEBP20929 6669 aa5.76□□□□□ -1.49
FN1-226ENST00000496542 CYP4F30PQ9H0H9 118 aa5.75□□□□□ -1.49
FN1-226ENST00000496542 ETDBQ3ZM63 59 aa5.74□□□□□ -1.49
FN1-226ENST00000496542 KRTAP10-5P60370 271 aa5.73□□□□□ -1.49
FN1-226ENST00000496542 A0A087WVE0 104 aa5.72□□□□□ -1.49
FN1-226ENST00000496542 TRAV22A0A0B4J277 110 aa5.72□□□□□ -1.49
FN1-226ENST00000496542 F8W1H4 67 aa5.72□□□□□ -1.49
FN1-226ENST00000496542 MUC12Q9UKN1 5478 aa5.71□□□□□ -1.49
FN1-226ENST00000496542 LOC101927531A0A1B0GV80 90 aa5.7□□□□□ -1.5
FN1-226ENST00000496542 LCE4AQ5TA78 99 aa5.68□□□□□ -1.5
FN1-226ENST00000496542 KRTAP5-3Q6L8H2 238 aa5.67□□□□□ -1.5
FN1-226ENST00000496542 IMUPQ9GZP8 106 aa5.66□□□□□ -1.5
FN1-226ENST00000496542 CRIPTQ9P021 101 aa5.66□□□□□ -1.5
FN1-226ENST00000496542 PCP4L1A6NKN8 68 aa5.63□□□□□ -1.51
FN1-226ENST00000496542 H0Y9P7 68 aa5.62□□□□□ -1.51
FN1-226ENST00000496542 NDUFC1O43677 76 aa5.62□□□□□ -1.51
FN1-226ENST00000496542 HIST1H4AP62805 103 aaKnown RBP5.62□□□□□ -1.51
FN1-226ENST00000496542 UQCRQO14949 82 aa5.61□□□□□ -1.51
FN1-226ENST00000496542 ATP5EP2Q5VTU8 51 aa5.61□□□□□ -1.51
FN1-226ENST00000496542 ATOX1O00244 68 aa5.6□□□□□ -1.51
FN1-226ENST00000496542 ACYP1P07311 99 aa5.6□□□□□ -1.51
FN1-226ENST00000496542 KMT2DO14686 5537 aa5.59□□□□□ -1.52
FN1-226ENST00000496542 KRTAP5-9P26371 169 aa5.58□□□□□ -1.52
FN1-226ENST00000496542 LCE5AQ5TCM9 118 aa5.58□□□□□ -1.52
FN1-226ENST00000496542 FAM240AA0A1B0GVK7 77 aa5.57□□□□□ -1.52
FN1-226ENST00000496542 H0YAA0 97 aa5.57□□□□□ -1.52
FN1-226ENST00000496542 KRTAP20-1Q3LI63 56 aa5.57□□□□□ -1.52
FN1-226ENST00000496542 ADM2Q7Z4H4 148 aa5.56□□□□□ -1.52
FN1-226ENST00000496542 MDN1Q9NU22 5596 aa5.55□□□□□ -1.52
FN1-226ENST00000496542 A8MUN3 132 aa5.53□□□□□ -1.52
FN1-226ENST00000496542 LINC00208Q96KT6 92 aa5.51□□□□□ -1.53
FN1-226ENST00000496542 LINC00643Q86TS7 51 aa5.47□□□□□ -1.53
FN1-226ENST00000496542 PRO2289Q9P1D8 64 aa5.47□□□□□ -1.53
FN1-226ENST00000496542 MP68P56378 58 aa5.46□□□□□ -1.54
FN1-226ENST00000496542 MT1XP80297 61 aa5.45□□□□□ -1.54
FN1-226ENST00000496542 PLAC4Q8WY50 150 aa5.44□□□□□ -1.54
FN1-226ENST00000496542 SPRR2FQ96RM1 72 aa5.43□□□□□ -1.54
FN1-226ENST00000496542 OCR1Q9BZK8 76 aa5.43□□□□□ -1.54
FN1-226ENST00000496542 R4GN34 69 aa5.42□□□□□ -1.54
FN1-226ENST00000496542 KRTAP23-1A1A580 65 aa5.41□□□□□ -1.54
FN1-226ENST00000496542 P0C880 135 aa5.4□□□□□ -1.54
FN1-226ENST00000496542 C20orf197Q8N268 126 aa5.39□□□□□ -1.55
FN1-226ENST00000496542 M0QZ58 72 aa5.38□□□□□ -1.55
FN1-226ENST00000496542 SPRR2EP22531 72 aa5.38□□□□□ -1.55
FN1-226ENST00000496542 SPRR2BP35325 72 aa5.38□□□□□ -1.55
FN1-226ENST00000496542 SPRR2AP35326 72 aa5.38□□□□□ -1.55
FN1-226ENST00000496542 KRTAP2-3P0C7H8 128 aa5.36□□□□□ -1.55
FN1-226ENST00000496542 KRTAP8-1Q8IUC2 63 aa5.36□□□□□ -1.55
FN1-226ENST00000496542 KRTAP2-4Q9BYR9 128 aa5.36□□□□□ -1.55
FN1-226ENST00000496542 DMAC1Q96GE9 116 aa5.35□□□□□ -1.55
FN1-226ENST00000496542 H3BPC8 53 aa5.34□□□□□ -1.55
FN1-226ENST00000496542 LINC01554Q52M75 96 aa5.33□□□□□ -1.56
FN1-226ENST00000496542 KRTAP12-2P59991 146 aa5.32□□□□□ -1.56
FN1-226ENST00000496542 A0A1B0GV90 55 aa5.29□□□□□ -1.56
FN1-226ENST00000496542 SCGB1A1P11684 91 aa5.29□□□□□ -1.56
FN1-226ENST00000496542 LCE1AQ5T7P2 110 aa5.27□□□□□ -1.57
FN1-226ENST00000496542 J3QR89 54 aa5.24□□□□□ -1.57
FN1-226ENST00000496542 TRAV7A0A075B6U4 112 aa5.22□□□□□ -1.57
FN1-226ENST00000496542 SPRR2DP22532 72 aa5.21□□□□□ -1.58
FN1-226ENST00000496542 KRTAP10-7P60409 375 aaPredicted RBP5.21□□□□□ -1.58
FN1-226ENST00000496542 MT-ATP8P03928 68 aa5.19□□□□□ -1.58
FN1-226ENST00000496542 ACYP2P14621 99 aa5.18□□□□□ -1.58
FN1-226ENST00000496542 KRTAP2-2Q9BYT5 123 aa5.18□□□□□ -1.58
FN1-226ENST00000496542 KRTAP2-1Q9BYU5 128 aa5.18□□□□□ -1.58
FN1-226ENST00000496542 SPTSSBQ8NFR3 76 aa5.16□□□□□ -1.58
FN1-226ENST00000496542 KRTAP10-12P60413 245 aa5.15□□□□□ -1.59
FN1-226ENST00000496542 CHKB-CPT1BH3BT56 60 aa5.12□□□□□ -1.59
FN1-226ENST00000496542 SMIM20Q8N5G0 67 aa5.08□□□□□ -1.6
FN1-226ENST00000496542 SNURFQ9Y675 71 aa5.04□□□□□ -1.6
FN1-226ENST00000496542 KRTAP15-1Q3LI76 137 aa5□□□□□ -1.61
FN1-226ENST00000496542 KRTAP13-4Q3LI77 160 aa4.99□□□□□ -1.61
FN1-226ENST00000496542 CAMK2N1Q7Z7J9 78 aa4.98□□□□□ -1.61
FN1-226ENST00000496542 K7ERU9 68 aa4.97□□□□□ -1.61
FN1-226ENST00000496542 SPANXA2-OT1Q8N9U9 137 aa4.95□□□□□ -1.62
FN1-226ENST00000496542 SERP2Q8N6R1 65 aa4.87□□□□□ -1.63
FN1-226ENST00000496542 A0A0D9SG42 100 aa4.86□□□□□ -1.63
FN1-226ENST00000496542 KRTAP19-7Q3SYF9 63 aa4.86□□□□□ -1.63
FN1-226ENST00000496542 COA5Q86WW8 74 aa4.86□□□□□ -1.63
FN1-226ENST00000496542 MT1EP04732 61 aa4.84□□□□□ -1.63
FN1-226ENST00000496542 SEC61GP60059 68 aa4.82□□□□□ -1.64
FN1-226ENST00000496542 KRTAP19-3Q7Z4W3 81 aa4.82□□□□□ -1.64
FN1-226ENST00000496542 DSTQ03001 7570 aaKnown RBP4.81□□□□□ -1.64
FN1-226ENST00000496542 SERP1Q9Y6X1 66 aa4.81□□□□□ -1.64
FN1-226ENST00000496542 SPATA8Q6RVD6 105 aa4.8□□□□□ -1.64
FN1-226ENST00000496542 GPR98Q8WXG9 6306 aa4.8□□□□□ -1.64
FN1-226ENST00000496542 SPINT4Q6UDR6 99 aa4.78□□□□□ -1.64
FN1-226ENST00000496542 A0A1B0GU33 70 aa4.75□□□□□ -1.65
FN1-226ENST00000496542 KRTAP19-5Q3LI72 72 aa4.73□□□□□ -1.65
FN1-226ENST00000496542 KRTAP12-1P59990 96 aa4.72□□□□□ -1.65
FN1-226ENST00000496542 CYSTM1Q9H1C7 97 aa4.72□□□□□ -1.65
FN1-226ENST00000496542 SVIPQ8NHG7 77 aa4.69□□□□□ -1.66
FN1-226ENST00000496542 COX7CP15954 63 aa4.68□□□□□ -1.66
FN1-226ENST00000496542 MT1GP13640 62 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms