RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 SYNE2Q8WXH0 6885 aaKnown RBP9.4□□□□□ -0.9
COL9A2-211ENST00000496215 LINC00208Q96KT6 92 aa9.4□□□□□ -0.9
COL9A2-211ENST00000496215 OCR1Q9BZK8 76 aa9.39□□□□□ -0.91
COL9A2-211ENST00000496215 MP68P56378 58 aa9.38□□□□□ -0.91
COL9A2-211ENST00000496215 A8MUN3 132 aa9.33□□□□□ -0.92
COL9A2-211ENST00000496215 KLKP1Q107X0 134 aa9.33□□□□□ -0.92
COL9A2-211ENST00000496215 NDUFC1O43677 76 aa9.3□□□□□ -0.92
COL9A2-211ENST00000496215 SPRR2GQ9BYE4 73 aa9.3□□□□□ -0.92
COL9A2-211ENST00000496215 Q5VV11 94 aa9.26□□□□□ -0.93
COL9A2-211ENST00000496215 SCGB1A1P11684 91 aa9.25□□□□□ -0.93
COL9A2-211ENST00000496215 IMUPQ9GZP8 106 aa9.25□□□□□ -0.93
COL9A2-211ENST00000496215 H3BPC8 53 aa9.24□□□□□ -0.93
COL9A2-211ENST00000496215 MT1BP07438 61 aa9.24□□□□□ -0.93
COL9A2-211ENST00000496215 KRTAP19-8Q3LI54 63 aa9.22□□□□□ -0.93
COL9A2-211ENST00000496215 CRIPTQ9P021 101 aa9.21□□□□□ -0.94
COL9A2-211ENST00000496215 H0YAA0 97 aa9.19□□□□□ -0.94
COL9A2-211ENST00000496215 K7ERU9 68 aa9.15□□□□□ -0.94
COL9A2-211ENST00000496215 A6NN06 94 aa9.11□□□□□ -0.95
COL9A2-211ENST00000496215 MT-ATP8P03928 68 aa9.1□□□□□ -0.95
COL9A2-211ENST00000496215 DMAC1Q96GE9 116 aa9.1□□□□□ -0.95
COL9A2-211ENST00000496215 ADM2Q7Z4H4 148 aa9.09□□□□□ -0.95
COL9A2-211ENST00000496215 KRTAP6-3Q3LI67 103 aa9.06□□□□□ -0.96
COL9A2-211ENST00000496215 SMIM20Q8N5G0 67 aa9.03□□□□□ -0.96
COL9A2-211ENST00000496215 TRAV7A0A075B6U4 112 aa9□□□□□ -0.97
COL9A2-211ENST00000496215 KRTAP10-5P60370 271 aa9□□□□□ -0.97
COL9A2-211ENST00000496215 C20orf197Q8N268 126 aa8.93□□□□□ -0.98
COL9A2-211ENST00000496215 NEBP20929 6669 aa8.89□□□□□ -0.99
COL9A2-211ENST00000496215 P0C880 135 aa8.88□□□□□ -0.99
COL9A2-211ENST00000496215 R4GN34 69 aa8.88□□□□□ -0.99
COL9A2-211ENST00000496215 ACYP2P14621 99 aa8.87□□□□□ -0.99
COL9A2-211ENST00000496215 M0QZ58 72 aa8.81□□□□□ -1
COL9A2-211ENST00000496215 SNURFQ9Y675 71 aa8.81□□□□□ -1
COL9A2-211ENST00000496215 MUC12Q9UKN1 5478 aa8.8□□□□□ -1
COL9A2-211ENST00000496215 SPTSSBQ8NFR3 76 aa8.8□□□□□ -1
COL9A2-211ENST00000496215 KRTAP3-2Q9BYR7 98 aa8.79□□□□□ -1
COL9A2-211ENST00000496215 PLAC4Q8WY50 150 aa8.77□□□□□ -1.01
COL9A2-211ENST00000496215 CHKB-CPT1BH3BT56 60 aa8.76□□□□□ -1.01
COL9A2-211ENST00000496215 PRO2289Q9P1D8 64 aa8.74□□□□□ -1.01
COL9A2-211ENST00000496215 SERP2Q8N6R1 65 aa8.73□□□□□ -1.01
COL9A2-211ENST00000496215 KRTAP20-1Q3LI63 56 aa8.69□□□□□ -1.02
COL9A2-211ENST00000496215 SPANXA2-OT1Q8N9U9 137 aa8.69□□□□□ -1.02
COL9A2-211ENST00000496215 LINC01554Q52M75 96 aa8.68□□□□□ -1.02
COL9A2-211ENST00000496215 MT1XP80297 61 aa8.67□□□□□ -1.02
COL9A2-211ENST00000496215 KRTAP5-9P26371 169 aa8.65□□□□□ -1.02
COL9A2-211ENST00000496215 KMT2DO14686 5537 aa8.64□□□□□ -1.03
COL9A2-211ENST00000496215 MDN1Q9NU22 5596 aa8.58□□□□□ -1.04
COL9A2-211ENST00000496215 COX7CP15954 63 aa8.47□□□□□ -1.05
COL9A2-211ENST00000496215 KRTAP12-2P59991 146 aa8.45□□□□□ -1.06
COL9A2-211ENST00000496215 COA5Q86WW8 74 aa8.45□□□□□ -1.06
COL9A2-211ENST00000496215 KRTAP8-1Q8IUC2 63 aa8.37□□□□□ -1.07
COL9A2-211ENST00000496215 SPRR2FQ96RM1 72 aa8.37□□□□□ -1.07
COL9A2-211ENST00000496215 H7BZZ5 65 aa8.33□□□□□ -1.08
COL9A2-211ENST00000496215 KRTAP13-4Q3LI77 160 aa8.33□□□□□ -1.08
COL9A2-211ENST00000496215 CYSTM1Q9H1C7 97 aa8.32□□□□□ -1.08
COL9A2-211ENST00000496215 KRTAP4-8A0A0G2JLE6 195 aa8.3□□□□□ -1.08
COL9A2-211ENST00000496215 KRTAP4-8Q9BYQ9 185 aa8.3□□□□□ -1.08
COL9A2-211ENST00000496215 SEC61GP60059 68 aa8.29□□□□□ -1.08
COL9A2-211ENST00000496215 KRTAP10-7P60409 375 aaPredicted RBP8.27□□□□□ -1.09
COL9A2-211ENST00000496215 KRTAP2-3P0C7H8 128 aa8.26□□□□□ -1.09
COL9A2-211ENST00000496215 KRTAP2-4Q9BYR9 128 aa8.26□□□□□ -1.09
COL9A2-211ENST00000496215 SERP1Q9Y6X1 66 aa8.26□□□□□ -1.09
COL9A2-211ENST00000496215 ANAPC13Q9BS18 74 aa8.24□□□□□ -1.09
COL9A2-211ENST00000496215 SPRR2EP22531 72 aa8.23□□□□□ -1.09
COL9A2-211ENST00000496215 SPRR2BP35325 72 aa8.23□□□□□ -1.09
COL9A2-211ENST00000496215 SPRR2AP35326 72 aa8.23□□□□□ -1.09
COL9A2-211ENST00000496215 KRTAP10-12P60413 245 aa8.23□□□□□ -1.09
COL9A2-211ENST00000496215 CAMK2N1Q7Z7J9 78 aa8.19□□□□□ -1.1
COL9A2-211ENST00000496215 LCE1AQ5T7P2 110 aa8.17□□□□□ -1.1
COL9A2-211ENST00000496215 A0A0D9SG42 100 aa8.11□□□□□ -1.11
COL9A2-211ENST00000496215 A0A1B0GU33 70 aa8.11□□□□□ -1.11
COL9A2-211ENST00000496215 SPATA8Q6RVD6 105 aa8.1□□□□□ -1.11
COL9A2-211ENST00000496215 CCDC179H3BU77 68 aa8.05□□□□□ -1.12
COL9A2-211ENST00000496215 A0A1B0GU69 56 aa8.03□□□□□ -1.12
COL9A2-211ENST00000496215 SPINT4Q6UDR6 99 aa7.99□□□□□ -1.13
COL9A2-211ENST00000496215 ATP5EP56381 51 aaPredicted RBP7.98□□□□□ -1.13
COL9A2-211ENST00000496215 KRTAP2-2Q9BYT5 123 aa7.97□□□□□ -1.13
COL9A2-211ENST00000496215 KRTAP2-1Q9BYU5 128 aa7.97□□□□□ -1.13
COL9A2-211ENST00000496215 SPRR2DP22532 72 aa7.95□□□□□ -1.14
COL9A2-211ENST00000496215 KRTAP12-1P59990 96 aa7.93□□□□□ -1.14
COL9A2-211ENST00000496215 SMIM26A0A096LP01 95 aa7.91□□□□□ -1.14
COL9A2-211ENST00000496215 PRR15LQ9BU68 103 aa7.84□□□□□ -1.15
COL9A2-211ENST00000496215 A8MU10 97 aa7.82□□□□□ -1.16
COL9A2-211ENST00000496215 TMEM258P61165 79 aa7.79□□□□□ -1.16
COL9A2-211ENST00000496215 KRTAP19-7Q3SYF9 63 aa7.75□□□□□ -1.17
COL9A2-211ENST00000496215 LCE3BQ5TA77 95 aa7.74□□□□□ -1.17
COL9A2-211ENST00000496215 LINC01558Q9Y6Z2 57 aa7.73□□□□□ -1.17
COL9A2-211ENST00000496215 MT1EP04732 61 aa7.69□□□□□ -1.18
COL9A2-211ENST00000496215 GPR98Q8WXG9 6306 aa7.64□□□□□ -1.19
COL9A2-211ENST00000496215 LCE5AQ5TCM9 118 aa7.6□□□□□ -1.19
COL9A2-211ENST00000496215 KRTAP19-3Q7Z4W3 81 aa7.6□□□□□ -1.19
COL9A2-211ENST00000496215 KRTAP19-5Q3LI72 72 aa7.58□□□□□ -1.2
COL9A2-211ENST00000496215 C10orf95Q9H7T3 257 aa7.56□□□□□ -1.2
COL9A2-211ENST00000496215 UQCR11O14957 56 aa7.55□□□□□ -1.2
COL9A2-211ENST00000496215 TNP1P09430 55 aa7.55□□□□□ -1.2
COL9A2-211ENST00000496215 DSTQ03001 7570 aaKnown RBP7.53□□□□□ -1.2
COL9A2-211ENST00000496215 LCE3AQ5TA76 89 aa7.47□□□□□ -1.21
COL9A2-211ENST00000496215 MT1GP13640 62 aa7.42□□□□□ -1.22
COL9A2-211ENST00000496215 PP632Q6XCG6 107 aa7.4□□□□□ -1.22
COL9A2-211ENST00000496215 MIR22HGQ0VDD5 57 aa7.38□□□□□ -1.23
COL9A2-211ENST00000496215 MT1LQ93083 61 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms