RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 C8orf17Q9NRJ1 99 aa3.23□□□□□ -1.89
GARNL3-219ENST00000495172 TSTD3H0UI37 97 aa3.22□□□□□ -1.89
GARNL3-219ENST00000495172 Q5W150 140 aa3.22□□□□□ -1.89
GARNL3-219ENST00000495172 CEND1Q8N111 149 aa3.22□□□□□ -1.89
GARNL3-219ENST00000495172 COPS9Q8WXC6 57 aa3.22□□□□□ -1.89
GARNL3-219ENST00000495172 TRBV7-4A0A0J9YYF1 115 aa3.21□□□□□ -1.9
GARNL3-219ENST00000495172 HSD52Q0P140 79 aa3.21□□□□□ -1.9
GARNL3-219ENST00000495172 C7orf65Q6ZTY9 151 aa3.21□□□□□ -1.9
GARNL3-219ENST00000495172 MT1MQ8N339 61 aa3.21□□□□□ -1.9
GARNL3-219ENST00000495172 A0A087WVE0 104 aa3.2□□□□□ -1.9
GARNL3-219ENST00000495172 FXYD2P54710 66 aa3.2□□□□□ -1.9
GARNL3-219ENST00000495172 BVES-AS1Q5T3Y7 98 aa3.19□□□□□ -1.9
GARNL3-219ENST00000495172 Q6ZVQ6 151 aa3.19□□□□□ -1.9
GARNL3-219ENST00000495172 FABP2P12104 132 aa3.18□□□□□ -1.9
GARNL3-219ENST00000495172 MT1GP13640 62 aa3.18□□□□□ -1.9
GARNL3-219ENST00000495172 A0A0B4J2C4 111 aa3.17□□□□□ -1.9
GARNL3-219ENST00000495172 M0R143 59 aa3.17□□□□□ -1.9
GARNL3-219ENST00000495172 ANKRD29Q8N6D5 301 aa3.17□□□□□ -1.9
GARNL3-219ENST00000495172 PCP4L1A6NKN8 68 aa3.16□□□□□ -1.9
GARNL3-219ENST00000495172 K7EQZ3 153 aa3.16□□□□□ -1.9
GARNL3-219ENST00000495172 K7ERJ3 54 aa3.16□□□□□ -1.9
GARNL3-219ENST00000495172 TRACP01848 142 aa3.16□□□□□ -1.9
GARNL3-219ENST00000495172 PRO1854Q9UHT4 67 aa3.16□□□□□ -1.9
GARNL3-219ENST00000495172 CCKP06307 115 aa3.15□□□□□ -1.91
GARNL3-219ENST00000495172 BATFQ16520 125 aa3.15□□□□□ -1.91
GARNL3-219ENST00000495172 C1orf64Q8NEQ6 169 aa3.15□□□□□ -1.91
GARNL3-219ENST00000495172 NDUFS5O43920 106 aa3.14□□□□□ -1.91
GARNL3-219ENST00000495172 SYNE1Q8NF91 8797 aaKnown RBP3.13□□□□□ -1.91
GARNL3-219ENST00000495172 VPS25Q9BRG1 176 aa3.13□□□□□ -1.91
GARNL3-219ENST00000495172 PSMB2P49721 201 aa3.12□□□□□ -1.91
GARNL3-219ENST00000495172 H0YGX0 51 aa3.11□□□□□ -1.91
GARNL3-219ENST00000495172 PP632Q6XCG6 107 aa3.11□□□□□ -1.91
GARNL3-219ENST00000495172 ADM2Q7Z4H4 148 aa3.11□□□□□ -1.91
GARNL3-219ENST00000495172 NAA38Q9BRA0 125 aaKnown RBP3.11□□□□□ -1.91
GARNL3-219ENST00000495172 TAX1BP3O14907 124 aa3.1□□□□□ -1.91
GARNL3-219ENST00000495172 NDUFB1O75438 58 aa3.1□□□□□ -1.91
GARNL3-219ENST00000495172 COX6CP09669 75 aa3.1□□□□□ -1.91
GARNL3-219ENST00000495172 SCGB1C2P0DMR2 95 aa3.1□□□□□ -1.91
GARNL3-219ENST00000495172 UBE2V1Q13404 147 aa3.1□□□□□ -1.91
GARNL3-219ENST00000495172 COL5A1-AS1Q5SY13 56 aa3.1□□□□□ -1.91
GARNL3-219ENST00000495172 MRPL34Q9BQ48 92 aaKnown RBP3.1□□□□□ -1.91
GARNL3-219ENST00000495172 LINC01554Q52M75 96 aa3.09□□□□□ -1.91
GARNL3-219ENST00000495172 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
GARNL3-219ENST00000495172 MMP24-AS1A0A0U1RRL7 71 aa3.08□□□□□ -1.92
GARNL3-219ENST00000495172 KRTAP5-1Q6L8H4 278 aa3.08□□□□□ -1.92
GARNL3-219ENST00000495172 A0A1B0GX51 115 aa3.07□□□□□ -1.92
GARNL3-219ENST00000495172 A0A1W2PPM0 123 aa3.07□□□□□ -1.92
GARNL3-219ENST00000495172 J3KT08 172 aa3.07□□□□□ -1.92
GARNL3-219ENST00000495172 SNCGO76070 127 aa3.07□□□□□ -1.92
GARNL3-219ENST00000495172 DNAL4O96015 105 aa3.06□□□□□ -1.92
GARNL3-219ENST00000495172 TMEM254Q8TBM7 123 aa3.06□□□□□ -1.92
GARNL3-219ENST00000495172 OBSCNQ5VST9 7968 aa3.06□□□□□ -1.92
GARNL3-219ENST00000495172 ATXN8Q156A1 80 aa3.05□□□□□ -1.92
GARNL3-219ENST00000495172 KRTAP19-5Q3LI72 72 aa3.05□□□□□ -1.92
GARNL3-219ENST00000495172 KRTAP12-4P60329 112 aa3.04□□□□□ -1.92
GARNL3-219ENST00000495172 KRTAP5-2Q701N4 177 aa3.04□□□□□ -1.92
GARNL3-219ENST00000495172 ORMDL1Q9P0S3 153 aa3.04□□□□□ -1.92
GARNL3-219ENST00000495172 SPCS1Q9Y6A9 102 aa3.04□□□□□ -1.92
GARNL3-219ENST00000495172 BAALC-AS2P0C853 105 aa3.03□□□□□ -1.92
GARNL3-219ENST00000495172 MT1LQ93083 61 aa3.03□□□□□ -1.92
GARNL3-219ENST00000495172 C9JAW5 83 aa3.02□□□□□ -1.93
GARNL3-219ENST00000495172 H3BQ85 93 aa3.02□□□□□ -1.93
GARNL3-219ENST00000495172 K7EP34 96 aa3.02□□□□□ -1.93
GARNL3-219ENST00000495172 TMEM256-PLSCR3K7ERE1 68 aa3.02□□□□□ -1.93
GARNL3-219ENST00000495172 M0QZ58 72 aa3.01□□□□□ -1.93
GARNL3-219ENST00000495172 R4GN34 69 aa3.01□□□□□ -1.93
GARNL3-219ENST00000495172 hDV103S1A0JD37 113 aa3□□□□□ -1.93
GARNL3-219ENST00000495172 GTF2H5Q6ZYL4 71 aa3□□□□□ -1.93
GARNL3-219ENST00000495172 KRTAP5-5Q701N2 237 aaPredicted RBP3□□□□□ -1.93
GARNL3-219ENST00000495172 A0A1B0GV90 55 aa2.99□□□□□ -1.93
GARNL3-219ENST00000495172 H3BT86 120 aa2.99□□□□□ -1.93
GARNL3-219ENST00000495172 P0C880 135 aa2.99□□□□□ -1.93
GARNL3-219ENST00000495172 Q6ZQT0 140 aa2.99□□□□□ -1.93
GARNL3-219ENST00000495172 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
GARNL3-219ENST00000495172 PRO0461Q9UI25 63 aa2.99□□□□□ -1.93
GARNL3-219ENST00000495172 PRAC1Q96KF2 57 aa2.98□□□□□ -1.93
GARNL3-219ENST00000495172 NDUFAF8A1L188 74 aa2.97□□□□□ -1.93
GARNL3-219ENST00000495172 F8W1H4 67 aa2.97□□□□□ -1.93
GARNL3-219ENST00000495172 JMJD7-PLA2G4BH0Y9G9 81 aa2.97□□□□□ -1.93
GARNL3-219ENST00000495172 C14orf132Q9NPU4 83 aa2.95□□□□□ -1.94
GARNL3-219ENST00000495172 LOC110117498A0A087WWA1 95 aa2.94□□□□□ -1.94
GARNL3-219ENST00000495172 ETDBQ3ZM63 59 aa2.94□□□□□ -1.94
GARNL3-219ENST00000495172 HCG22E2RYF7 251 aa2.93□□□□□ -1.94
GARNL3-219ENST00000495172 LCE3CQ5T5A8 94 aa2.91□□□□□ -1.94
GARNL3-219ENST00000495172 A0A1B0GW54 56 aa2.9□□□□□ -1.95
GARNL3-219ENST00000495172 KRTAP9-6A8MVA2 160 aa2.89□□□□□ -1.95
GARNL3-219ENST00000495172 NREPQ16612 68 aa2.88□□□□□ -1.95
GARNL3-219ENST00000495172 NDUFC1O43677 76 aa2.87□□□□□ -1.95
GARNL3-219ENST00000495172 UBL5Q9BZL1 73 aa2.85□□□□□ -1.95
GARNL3-219ENST00000495172 FAM240AA0A1B0GVK7 77 aa2.84□□□□□ -1.95
GARNL3-219ENST00000495172 J3QR89 54 aa2.84□□□□□ -1.95
GARNL3-219ENST00000495172 ACYP1P07311 99 aa2.84□□□□□ -1.95
GARNL3-219ENST00000495172 BPY2O14599 106 aa2.83□□□□□ -1.96
GARNL3-219ENST00000495172 Q8N9L7 120 aa2.82□□□□□ -1.96
GARNL3-219ENST00000495172 A0A0D9SG42 100 aa2.81□□□□□ -1.96
GARNL3-219ENST00000495172 K7ERU9 68 aa2.8□□□□□ -1.96
GARNL3-219ENST00000495172 CXCL6P80162 114 aa2.8□□□□□ -1.96
GARNL3-219ENST00000495172 CASC2Q6XLA1 102 aa2.8□□□□□ -1.96
GARNL3-219ENST00000495172 LINC00643Q86TS7 51 aa2.8□□□□□ -1.96
GARNL3-219ENST00000495172 ATP5EP2Q5VTU8 51 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms