RNA–Protein interactions for RNA: ENST00000494977.1

FGD4-208, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 2

Gene FGD4, Length 2,349 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-208ENST00000494977 VPS13DQ5THJ4 4388 aa3.08□□□□□ -1.92
FGD4-208ENST00000494977 FLNBO75369 2602 aaKnown RBP3.08□□□□□ -1.92
FGD4-208ENST00000494977 KRTAP1-4P0C5Y4 121 aa3.07□□□□□ -1.92
FGD4-208ENST00000494977 SMR3AQ99954 134 aa3.07□□□□□ -1.92
FGD4-208ENST00000494977 TENM1Q9UKZ4 2725 aa3.06□□□□□ -1.92
FGD4-208ENST00000494977 NSD1Q96L73 2696 aaPredicted RBP3.05□□□□□ -1.92
FGD4-208ENST00000494977 KRTAP19-1Q8IUB9 90 aa3.04□□□□□ -1.92
FGD4-208ENST00000494977 FBN3Q75N90 2809 aa3.04□□□□□ -1.92
FGD4-208ENST00000494977 KRTAP4-7Q9BYR0 210 aa3.02□□□□□ -1.93
FGD4-208ENST00000494977 DNAH3Q8TD57 4116 aa3.02□□□□□ -1.93
FGD4-208ENST00000494977 SPRR5A0A1B0GTR4 108 aa3.01□□□□□ -1.93
FGD4-208ENST00000494977 USP24Q9UPU5 2620 aa3□□□□□ -1.93
FGD4-208ENST00000494977 KMT2AQ03164 3969 aa3□□□□□ -1.93
FGD4-208ENST00000494977 IGSF10Q6WRI0 2623 aa2.99□□□□□ -1.93
FGD4-208ENST00000494977 LCE4AQ5TA78 99 aa2.99□□□□□ -1.93
FGD4-208ENST00000494977 KRTAP4-12Q9BQ66 201 aa2.98□□□□□ -1.93
FGD4-208ENST00000494977 KRTAP10-2P60368 255 aa2.97□□□□□ -1.93
FGD4-208ENST00000494977 KRTAP19-4Q3LI73 84 aa2.97□□□□□ -1.93
FGD4-208ENST00000494977 CMYA5Q8N3K9 4069 aa2.97□□□□□ -1.93
FGD4-208ENST00000494977 DYNC2H1Q8NCM8 4307 aaKnown RBP2.96□□□□□ -1.93
FGD4-208ENST00000494977 MGAM2Q2M2H8 2515 aa2.95□□□□□ -1.94
FGD4-208ENST00000494977 KRTAP5-3Q6L8H2 238 aa2.95□□□□□ -1.94
FGD4-208ENST00000494977 HECTD4Q9Y4D8 3996 aa2.95□□□□□ -1.94
FGD4-208ENST00000494977 DNAH11Q96DT5 4516 aa2.95□□□□□ -1.94
FGD4-208ENST00000494977 KRTAP9-8Q9BYQ0 159 aa2.94□□□□□ -1.94
FGD4-208ENST00000494977 HUWE1Q7Z6Z7 4374 aaKnown RBP2.94□□□□□ -1.94
FGD4-208ENST00000494977 DNAH7Q8WXX0 4024 aa2.94□□□□□ -1.94
FGD4-208ENST00000494977 DNAH6Q9C0G6 4158 aa2.94□□□□□ -1.94
FGD4-208ENST00000494977 KRTAP9-7A8MTY7 169 aa2.93□□□□□ -1.94
FGD4-208ENST00000494977 KRTAP4-2Q9BYR5 136 aa2.93□□□□□ -1.94
FGD4-208ENST00000494977 PRKDCP78527 4128 aaKnown RBP2.92□□□□□ -1.94
FGD4-208ENST00000494977 STAB1Q9NY15 2570 aa2.92□□□□□ -1.94
FGD4-208ENST00000494977 DNAH2Q9P225 4427 aa2.9□□□□□ -1.95
FGD4-208ENST00000494977 MYCBP2O75592 4640 aa2.88□□□□□ -1.95
FGD4-208ENST00000494977 LCE1DQ5T752 114 aa2.87□□□□□ -1.95
FGD4-208ENST00000494977 Q5VSD8 79 aa2.86□□□□□ -1.95
FGD4-208ENST00000494977 KRTAP4-9Q9BYQ8 210 aa2.85□□□□□ -1.95
FGD4-208ENST00000494977 KRTAP10-1P60331 282 aa2.84□□□□□ -1.96
FGD4-208ENST00000494977 PLECQ15149 4684 aaKnown RBP2.83□□□□□ -1.96
FGD4-208ENST00000494977 TNP1P09430 55 aa2.8□□□□□ -1.96
FGD4-208ENST00000494977 LRP1BQ9NZR2 4599 aa2.79□□□□□ -1.96
FGD4-208ENST00000494977 APOBP04114 4563 aaKnown RBP2.78□□□□□ -1.96
FGD4-208ENST00000494977 KRTAP9-3Q9BYQ3 159 aa2.77□□□□□ -1.97
FGD4-208ENST00000494977 VPS13BQ7Z7G8 4022 aa2.75□□□□□ -1.97
FGD4-208ENST00000494977 DNAH5Q8TE73 4624 aa2.74□□□□□ -1.97
FGD4-208ENST00000494977 SACSQ9NZJ4 4579 aa2.74□□□□□ -1.97
FGD4-208ENST00000494977 J3QKU1 62 aa2.71□□□□□ -1.98
FGD4-208ENST00000494977 KRTAP4-5Q9BYR2 181 aa2.71□□□□□ -1.98
FGD4-208ENST00000494977 LRP1Q07954 4544 aaKnown RBP2.7□□□□□ -1.98
FGD4-208ENST00000494977 PKHD1P08F94 4074 aa2.7□□□□□ -1.98
FGD4-208ENST00000494977 STARD9Q9P2P6 4700 aa2.69□□□□□ -1.98
FGD4-208ENST00000494977 KRTAP4-11Q9BYQ6 195 aa2.69□□□□□ -1.98
FGD4-208ENST00000494977 PKHD1L1Q86WI1 4243 aa2.68□□□□□ -1.98
FGD4-208ENST00000494977 A0A1B0GVY2 172 aa2.68□□□□□ -1.98
FGD4-208ENST00000494977 LCE5AQ5TCM9 118 aa2.67□□□□□ -1.98
FGD4-208ENST00000494977 FAT2Q9NYQ8 4349 aa2.66□□□□□ -1.98
FGD4-208ENST00000494977 SMR3BP02814 79 aaPredicted RBP2.64□□□□□ -1.99
FGD4-208ENST00000494977 PKD1P98161 4303 aa2.63□□□□□ -1.99
FGD4-208ENST00000494977 TNXBP22105 4242 aa2.6□□□□□ -1.99
FGD4-208ENST00000494977 HSPG2P98160 4391 aa2.59□□□□□ -1.99
FGD4-208ENST00000494977 FAT3Q8TDW7 4589 aa2.59□□□□□ -1.99
FGD4-208ENST00000494977 KRTAP10-4P60372 401 aaPredicted RBP2.59□□□□□ -2
FGD4-208ENST00000494977 KRTAP10-10P60014 251 aa2.58□□□□□ -2
FGD4-208ENST00000494977 DYNC1H1Q14204 4646 aaKnown RBP2.56□□□□□ -2
FGD4-208ENST00000494977 LCE3AQ5TA76 89 aa2.52□□□□□ -2.01
FGD4-208ENST00000494977 KRTAP8-1Q8IUC2 63 aa2.49□□□□□ -2.01
FGD4-208ENST00000494977 FAT1Q14517 4588 aa2.49□□□□□ -2.01
FGD4-208ENST00000494977 KRTAP10-12P60413 245 aa2.46□□□□□ -2.02
FGD4-208ENST00000494977 FLGP20930 4061 aaPredicted RBP2.45□□□□□ -2.02
FGD4-208ENST00000494977 HMCN1Q96RW7 5635 aa2.44□□□□□ -2.02
FGD4-208ENST00000494977 LPAP08519 4548 aa2.44□□□□□ -2.02
FGD4-208ENST00000494977 KRTAP21-3Q3LHN1 58 aa2.42□□□□□ -2.02
FGD4-208ENST00000494977 KRTAP12-3P60328 96 aa2.41□□□□□ -2.02
FGD4-208ENST00000494977 HYDINQ4G0P3 5121 aa2.38□□□□□ -2.03
FGD4-208ENST00000494977 LRP2P98164 4655 aa2.36□□□□□ -2.03
FGD4-208ENST00000494977 KRTAP10-5P60370 271 aa2.35□□□□□ -2.03
FGD4-208ENST00000494977 KRTAP2-3P0C7H8 128 aa2.33□□□□□ -2.04
FGD4-208ENST00000494977 KRTAP2-4Q9BYR9 128 aa2.33□□□□□ -2.04
FGD4-208ENST00000494977 KRTAP2-1Q9BYU5 128 aa2.33□□□□□ -2.04
FGD4-208ENST00000494977 DNHD1Q96M86 4753 aa2.33□□□□□ -2.04
FGD4-208ENST00000494977 MT1HL1P0DM35 61 aa2.31□□□□□ -2.04
FGD4-208ENST00000494977 LCE1AQ5T7P2 110 aa2.31□□□□□ -2.04
FGD4-208ENST00000494977 SPRR2GQ9BYE4 73 aa2.31□□□□□ -2.04
FGD4-208ENST00000494977 M0R2T5 61 aa2.3□□□□□ -2.04
FGD4-208ENST00000494977 LCE3CQ5T5A8 94 aa2.3□□□□□ -2.04
FGD4-208ENST00000494977 KMT2CQ8NEZ4 4911 aaKnown RBP2.29□□□□□ -2.04
FGD4-208ENST00000494977 MUC17Q685J3 4493 aa2.29□□□□□ -2.04
FGD4-208ENST00000494977 KRTAP19-2Q3LHN2 52 aa2.29□□□□□ -2.04
FGD4-208ENST00000494977 KRTAP4-1Q9BYQ7 146 aa2.25□□□□□ -2.05
FGD4-208ENST00000494977 HERC1Q15751 4861 aa2.25□□□□□ -2.05
FGD4-208ENST00000494977 KRTAP10-7P60409 375 aaPredicted RBP2.22□□□□□ -2.05
FGD4-208ENST00000494977 KRTAP2-2Q9BYT5 123 aa2.18□□□□□ -2.06
FGD4-208ENST00000494977 KRTAP9-6A8MVA2 160 aa2.18□□□□□ -2.06
FGD4-208ENST00000494977 KRTAP12-4P60329 112 aa2.17□□□□□ -2.06
FGD4-208ENST00000494977 MT1XP80297 61 aa2.14□□□□□ -2.07
FGD4-208ENST00000494977 KRTAP19-8Q3LI54 63 aa2.12□□□□□ -2.07
FGD4-208ENST00000494977 KRTAP19-5Q3LI72 72 aa2.12□□□□□ -2.07
FGD4-208ENST00000494977 LCE1FQ5T754 118 aa2.1□□□□□ -2.07
FGD4-208ENST00000494977 KRTAP6-3Q3LI67 103 aa2.09□□□□□ -2.07
FGD4-208ENST00000494977 RYR1P21817 5038 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms